SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69658_c0_seq3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_sodium_leak_channel_non-selective_protein_[Papilio_polytes]
Ontology
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:3.57 TPM:6.22
ORF EntryO_BomoEE19162_5prime_partial:A_BomoEE_comp69658_c0_seq3
Sequence
(Nucleotide)
ACTCTTTTCTATTTCATTTCGTTTTCGTTAAATTTAATTTTAAAACAAACGTATGAGCTA
TGTTCCCTTTGCTAGTTAAAATTGCAAGAACATTAATTATTGACCAGCAATGTAAAACAT
CTCAGATTCAAATCATTTTGAACAGTGTTTTGAACGAAAATCAAGGAAGTTAAAATAATT
GTTGAATTTCATGTTAATATTTAAATACTGTATTGTCCCTAGACGTTAATAGTGTTAACA
AATATTATTCATAATAGTTTTTTGTGTTTAAAACAGATTTTTCAAGCTGCTTTTATTTTA
TGAAAATGAAATATTCAAAGTGGAAATGGTTCCAAATAAATACAGAAATTACAAATTCCA
TCCGCACCGCTTAAGAATAATTTTCAAAAATTCTCTTCAAACGCATAAAAATGTTGGGAA
GGAAGCAGAGCTTGAAAGGAGAGCCTGTGCTGGCTGATTACGGACCAGAGGAATCGCTAA
ATGAAAGTGCTGATATCGAATGGGTTAATAAGCTATGGGTTAGAAGAATTTTGAGACTAT
GTGCCCTTTTGAGTTTGATGTCTGTATCTTTAAACACACCAAAATCATTTGAGAAGTATC
CTTATCTTCAAACTATAACTTTTGTAGTTGATTGCTGCGTAACTCTACTTTTTACTGCTG
AAATGATTGCTAAAATGCACATAAGAGGAATTCTTAAGGGGGATGTCGCATACCTAAAAG
ATCATTGGTGCCAATTTGATGCTTCTATGGTATTTTTTCTTTGGGTATCTGTATTGCTAC
AAATGTTTGAGTTAACAGGAATTGTACCTAGATACAGCTATTTAAGCATACTAAGAGCAC
CTAGGCCATTAATTATGATACGGTTTTTAAGAGTATTTTTGAAGTTTTCAATGCCAAAAT
CTAGAATAAACCAGATATTCAAGAGATCAAGTCAACAAATCTACAATGTTACACTATTCT
TCTTGTTTTTTATGTCACTGTATAGTTTGCTTGGTGTTCAATTTTTTGGAGAGCTCACAC
ATCATTGTGTTAGGAACAACACCCACCCAAGTGACATAACGATAAACTCATTAGCAATCC
CAGACACGTTTTGCTCCCCTGACCCTGACTCTGGATATCAGTGCCCTTCTGGTATGAAAT
GTATGAAACTAAATTTATCAAAGTATATTATGGGCTTCAATGGATTCGAGGAATTTACAA
CAAGTTTATTTACGGTATACCAGGCGTCTTCACAAGAAGGATGGGTGTTTATAATGTATC
GAGCTATAGATTCGTTGCCAACTTGGAGATCTGCCTTATACTTTAGCACGATGATATTTT
TCTTGGCCTGGCTGGTAAAAAACGTGTTCATAGCTGTCATCACGGAGACCTTCAATGAGA
TTAGAGTTCAGTTCCAGCAGATGTGGGGCGTTCGGAATCCAATAACTAAAGGTAGCACGA
CTCAGTTCTTTACTGGCGACGACAACGGCTGGAAATTGGTCACTATTGATGAAAATAAAC
ATTCAGGTACTGCACCAGATATATTTCATCGATTGTTGCGATCCGCTTACTTTCGGCTTT
TGGTGATGAGCGCGGTGTTAGCAAATGGAATTATAACAGCCTCTATGCAGTTTCATCACG
ACGGAAACCCCAGAGAATATTTCTACCAGAAGTATTACTATATAGAAATTGCATTTACGA
TTTTCTTGGATTTGGAAGCTTTACTCAAGATCTGGTGTTTGGGTTTGAAAGGATATTTCA
AGCATTCTGTCCACAAGTTTGAATTGCTCTTGGCTATTGGGACCACGTTGCACATTATAC
CCCAGCTGTACATGTCGGCTTTCACTTATTTTCAGGTTCTTCGAGTGGTACGACTAATAA
AAGCATCGCCGATATTGGAAGGATTCGTGTACAAGATCTTTGGACCCGGGAAAAAACTAG
GAAGCCTTATTATATTCACCATGTGCTTGCTCATCATAAGCTCATCGATTTCGATGCAGT
TGTTTTGCTTTCTGTGTGAATTTACCAAATTTGAAACATTTGATGAGGCATTTATGTCAA
TGTTCCAAATACTCACACAAGAAGCTTGGGTTGAAGTAATGGACGAGACCATGGTTCGAA
CCAGTCAAACTCTTACCCCATTAGTGGCCATTTACTTCATATTATACCATCTATTCGTCA
CTCTGATTGTACTTTCGCTCTTCGTTGCCGTCATTTTAGACAATCTCGAGCTGGACGAGG
ACATAAAGAAGTTAAAACAATTAAAGTACCGACAGCAGAGCGCCGAAATCAAAGAGAGCC
TGCCGTTTAGATTGAGAATATTCGAAAAGTTCCCCGACAGTCCGCAGATGACGAAGCTAC
ACAAAGTCCCTGGGGATTTTAATTTACCAAAGGTGCGAGAGTCGTTCATGCGGCAGTTCG
TGTGCGAGGTGGAGGGCGAGGAGGAGGCGGGGGGCGCG
(2438 bp)

- SilkBase 1999-2023 -