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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69643_c0_seq3
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_homeobox_protein_cut_isoform_X6_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007469 P antennal development
GO:0007605 P sensory perception of sound
GO:0008052 P sensory organ boundary specification
GO:0008585 P female gonad development
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048098 P antennal joint development
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0060288 P formation of a compartment boundary
GO:0061332 P Malpighian tubule bud morphogenesis
GO:0070983 P dendrite guidance
Transcript
Level		FPKM:0.28 TPM:0.49
ORF EntryO_BomoEE19097_5prime_partial:A_BomoEE_comp69643_c0_seq3
Sequence
(Nucleotide)
CGCACCGTCTCCTCGGAGTCGCGCCGGAAATCGTCGCCGCGCATGACGCAGACGCCGTTG
ATGATGACTTCATCGGGGTTGCGCGGTTTCTCGTCCTGCCAGTCCGGGTTGACCCACTGC
GGCGCCGCAGGCTTCCGTCTGCTGGATCGACCCTGGGGCGTCGAGGAAGCTTTCGGTTCA
GTCTTAGATTCGTCGTCTAGCGAGTCCTCGGAGCCGAGGTTGCTCTCGACGTCGTCGTCT
TCGAAGTCGTCTCCATCAGGTTCGCGTTTCAACGGCATCGTGAGGTCGAGTCCACCGGCT
GTGTCTTTGCCTTCTTCGGGAACAACGAGCCCGCGTCCAATCAGCGCGGCGAGGTTCGAG
TTCGCTGCAAAGTACGGAGGATAGGGGAGCGGAACCCCGGCCAGGCCCATCCTCTCCTTC
TGTAGTTCCAGCAGTCTCTGATTTAGAAGTAGCCTAAACTGAACGGGGTCGAAAGGCGCC
GAGGACTGTTCTCGTGCCGGCGGCTCTGACGGTAGCCCGTGGGGCGCCTGCTGTTTGAGC
CTCATACGATGATTGTGGAACCAGTTCGTAATGGTACGGGTGGATAGCCCTAACTCGGCA
GCCAGGAATTCTATTGTGGGCATATTGGGATACGGATCAAGGGCAAAAGCTAATCTCAGC
GCTTCTTTCTGCTCTTCCGAGAACAAGACTCTTTGTTTCTTAGCACAGGGAGCTCCAGAG
TTGGGTCCGGGCGAACTGGAGTGGTAGAACTCAGAGGTGTCGTTGGAGGAGGTGTCGGAC
GAGTTGTCCTGTCCGGGACCGCTCGACCGCCGCCGTTTGTTCGCTTCGCGTCGTTCGTTC
TTGAGCGCCTGAAGGCGGTCGATGTTGTGAGCGTCGCTCAGCCAAAGCTGCATCCGAATG
AAGGGCTCCCTACCTTTTATGCTTAACATGTGCCAAGGTTTAGGTTTTGATAATAATTCG
CTGACCGATCCCTGCGAGAGGCCGAGAACTGCTTCACCAAATATCTTTTGTCCGATATTA
TTCGCAAGCAAAGCTTCTTTTATTTTGGTCGTGATGGTCTGCGTGTCGAGATCTTGCGTG
AGAGCGGCCATTTCGTATACGCTGGGTGTCATGTGTTGGTGCAGGGTCCGCATCACTGGA
GGCTGGTGATGTGGCTGTGGAGGAGGCGGAGGTTTCCTTTCCTTGTTGTTGTTGTCGTGG
TGCTGCGGTGGCAGAGTGACGGCGTGGTGAGGAGGGAATCCAGGAGGGGTGAGCAGCAGC
GGCGTGGGTTGTCCGAGATGTGCCAGGTGTCCCGGACCCAACAGTTGTTCTTGTTGCATT
TTGCTCAGTAGAGACGTGGCGTCTGAGATCATTTTTTGCGTCGGCGGCATCGGTTTGTTC
ATGTTTGGCGGACAAGGAGGTGCTCCGCTGTAGTTTCCGGTTCTCATCAGTTTCTCGGGT
GCAATCTTGTACTGTGACGCAACCAGCTTGTGAACAGCATTATCGTCTTCTAAGAACATC
TTCATCCTGATAAATGGCTCCCTTCCCTTTTGCGTAAGCATATGCCAGGGCTTCGGTCTC
GCTAACAAATCGCTGACCGATCCTTGAGAGAGACCAAGAACTGACTCCCCAAACAAACGT
TGGCTTATGGAGTACTGGCTTAATGCTTCCTTGACCCGTCGGACTATCTCCTCCGTGTTC
AAGTTGTTAAAGAGATCAAACTGTTGTTGGGTGATCGGCGGTAGTACAGCTTTCATGGAT
CTTTGTGGCGGCGGATGGTGCGGGGGATTTGTTGGTTGCGATATTAAGCTATTAGTTATT
GAGGCCATTCTCTGCAAGGGGCTTGCCGCTGCTGAGCTAGTAAAGTCCTCGTTGGGCGTG
ATCGCGGGTGGTAGAATAGCATTCCCTAGTGGGCTGGAAGCAGACGACCCCGTGGACTGC
TGTCCGGGCTCTAGCTTAGGTCGGACCAATGAGAACGCACTACCTGCGCGGCGTATCGCC
TCTTCGGCATCTAATGGCTTGTCCTTATCACTATCAGTCATTCCGTTCATTTTCATAGTT
TTGTCTTTCGGAAGAGACAAATCTTGAATGGCTCCCGAGCCATTCATATGTTGGTTTTGA
GCTTGCTGTATTGCCTGTTGCTGCAGGGCGAGCAGGTTCGGAAAGGGCGGCATTCCTGGC
AAGTTGTGGAGATTGGGAATGTTGGTCCCCGGCTGGAGCTTAGCCAGCTCCCTGTGGTAG
GCCTCGAGCGCCATGCGAATGTCCTCGGGCGGTCTCTCCATGTGAGGAGCCATACCGCTG
CTGAAAAAAAGGGGGAAGCATGCCAGGGAAGCTATCTCGGCTGTGGCGCATGTCTTCAAC
CCGCCTGGTCATGATCTTAGCCAGTTCCTCATGGTAGATGCGCACGACTTTATCCGGAGG
AATGTCATCGTTTTCGTACTTCTTAAGTCTTCTGTTTTGACTCGAATCCTTATTTGAAAA
CGGTGAGAGGCACTGGGTCCTTGGTGAGCTGGAATCCTCATTACTCCTAGAATCATCATT
ATTGTGGTGTCCTGATGGGGTTTTCATAAGGTGTGAAGCTTCGCTGAGCATGTGAGCAAG
ACGGTCGTCGCCTTCTCCTTCTGATCTACCGAAGCCGGGACCTGGAGTGCCATCTTTCGT
CCCTACTTTTTTAGGAATGAGAGACTTGAGGAGCATGATGGCGGCCTCGTCGCACGCCCA
CGCGTGCATCTTCCTGTACGAGTCGCGGCCCTTCTCCGTCAGCTTGTCCCAGGGCTTCGG
(2760 bp)

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