SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69611_c0_seq5
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_structure-specific_endonuclease_subunit_SLX1_homolog_[Papilio_xuthus]
Ontology
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0033557 C Slx1-Slx4 complex
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.57 TPM:0.99
ORF EntryO_BomoEE19020_5prime_partial:A_BomoEE_comp69611_c0_seq5
Sequence
(Nucleotide)
TTTTTTTTTAAATATTAGGAATTTTTTTAATACACAAATATTGCGTCATAAATCTTCTTT
ACAGTCCAAAAACCAACTGGGTTGTTCATCGTCAATTTCATCAGCTACATTACTAGGGAT
AACCTCATCATTTCCAGATAAAGTCTCATCTGTCACACCACAATCACCATTTAAATCCAG
GCTGCATCCCTTTATCTTTCTGATAAGGTCACCCCATTTCAACTTGATATCGCATAAAGG
GCAAGAACCTTGTATAGGAATGTACTCCCCTGGCTCCAAAAACCGATCAGCTAAGCAACT
AATATGACAAACTAACACACAGAATTGATTTAAACATTTAATTTTTGATTGATAGCTTTT
TATTAGGCGGCAACATATGATGCATTCTTCAGATTTATCTTCATAACCAACATTATCGAT
TTTCTTTAAGTTTTTAATTTTGACAGGTCCGTAGCAGATTTTCATGTGTTCCGGTGGTTT
TCTCGTCACCATTGAAAAACTTGAAACTGGCTTTCATCTTATTTATCGTTCTTGTCAGTC
ATTGATGTAGCTAGTCAGGCAAGATACTGATTACCAATACATAGCATGGGAGTTTTTTCT
GAAGCAATTCTCTTATATGTAAACTGGATGAACACAAAACTTTCATTCATCGTGCGTCTT
ACTTTCAGATAGATCAAATCTTATAACAGGCCAGAAAGAATCATTTCACATTTTTCTTTT
CTCAACCATTTCAAGTTCATACAAACAATAAATATATTATATCAAGGTTTCCTAAGATTT
AAAGCTTTAACTTACTGGAAATTCTTCAAAATATTCTTTCTCAAGCCATCTAATTAGTAA
TGGCAATCGACACCAAGGTCCAACTCTCAGCATTTCACTGAGTACCCTTAGTTTAAACTG
GAATTCGGATTCTTGACGAGGTATCTTTTTGAGATATAAATGTTGCAGTCTTGTTGTTTT
TGTTGGATTCTGCCAGGCCCATTCAAACCTTAGTGCTGAAATATTATTAGGAAAACCGTG
GACAATAAGCACCATTTTCCATGGCCCTTTATTACTAGTGCGATAAGCTCCACCGGCCCA
AGTTCCACGATTATGCTGCATGATTCGCCGGTTCGGCTCCCGGGTATATCCTATATACGT
TCGTCCTTTATATTTCGGATTCAAACAGTACAACAGATACACGCCAAAGAAATCTTCAAC
TACTTCTGGCTCTGTCATTTTTTTTCCAGATGAAATCAACTTCCTATTTATTTCAGGAAA
GTGGTACCCTAATTGCACAGATTTATAGAAAACGATAGGAGCTAAGAGCGTTTATATTTG
TTAGTATTATTTTGGTTACCACGTACTATTTTATTGCATGCTGGTTTAGCCTGGTTGTTG
TTGTTTGTTTTGCTGTTTAGATTATCATTATAACGTTGCGGCGTTGCAATATTTGCAATC
TGTCAAAAACAGATGATTTTATTGACAGGACATATATGCCAATAAAAGGGCCCCATAAAT
GAAAGATCGTTCTGAAACGATGGATTGATAGTGTATTGTGGCGATCTTCACGACGAAGAT
TCACTTCACTTCACTTCTGTAACGACGGATCGTAAAGACAAATCAATCATTCTGTATATG
GAGCCTTTTAGGGTACAAAAACCTTCCTCCTTTTTTTTCGAAAAAAAATGCAATACCCAA
AAAAAAATTAATTATTTCTGGGAAATCCAGTAAATCTAAATTAACCTTAGAATCTTGAGA
ATATGTTTGTTGCTTGCATACTTACA
(1766 bp)

- SilkBase 1999-2023 -