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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69576_c1_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_runt-related_transcription_factor_3-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001709 P cell fate determination
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007469 P antennal development
GO:0007486 P imaginal disc-derived female genitalia development
GO:0016360 P sensory organ precursor cell fate determination
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0035162 P embryonic hemopoiesis
GO:0035163 P embryonic hemocyte differentiation
GO:0035165 P embryonic crystal cell differentiation
GO:0035168 P larval lymph gland hemocyte differentiation
GO:0035170 P lymph gland crystal cell differentiation
GO:0035211 P spermathecum morphogenesis
GO:0035314 P scab formation
GO:0042060 P wound healing
GO:0042675 P compound eye cone cell differentiation
GO:0042688 P crystal cell differentiation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045165 P cell fate commitment
GO:0045467 P R7 cell development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046672 P positive regulation of compound eye retinal cell programmed cell death
GO:0048477 P oogenesis
GO:0048592 P eye morphogenesis
GO:0048749 P compound eye development
Transcript
Level		FPKM:7.76 TPM:13.53
ORF EntryO_BomoEE18919_complete:A_BomoEE_comp69576_c1_seq1
Sequence
(Nucleotide)
CGCAGATTGACCGCAGAGAATGGAGGCAGCGAGTGACAGAATGGCGGCGGTTCAGTAGTG
GAGAGTCGCGCGGGCAGCGAGCACGCGTCCAGACTCCGTCGAGCGCGCACGCTGACTCAT
CCGACCGAACTCACTACGCGACGCGCGCGATAGACACCTGTCAGCCGACAACACGTAAAC
AATTCCAATAACAAGACAAATTAGAAATGCTCTTATCAATCGACCACGAAGCGCGGGAAA
AAATATTCAAAAATCACTGACTTTTACGTTGACAACTTTGAACACCTTGAGACGCCGGTA
ACTTGAAAATTCTTCTGAGAATATCCGACCGGAACTTAATGATCGCCGTGATTTGGGCTC
TCGCAATAACCCGGGAGGATCGTGACTCATCTAAAATGTCGAAAGTAAAGTTTAAGAAAT
CACCAAGGTTCGTTCTAACGTAAACTGGAGCATATTGCCTGCCTCGTCGACCCATTGAGG
AAATAACGACATAAATATTCGTTTGCGATATAAACCAGGACGCCAAAGTGACCGCACACA
CGAGTTGTTATTTAAGAAAGAATACATTTAAATTAAACCAATTAGAAAAGAAGAGACTGA
TACAGTTTAAGAATCCAAAGAAGGACAGAGTTTAAAGGAATCAACTTGCCCGTGCTAAGT
GAACACTCAGTGTAGTAAACTTTCGCCTAAACAACTAAAGGCATCAAAAGGTCTGCGTTA
TCGTGAACTTGCAGAGACTAAAATTGGAACAGCGCCAGCACCTTAAACTTAGGACACTTG
AATTTACGATTAAATCGTAACGTAACGAAATTGGAATAATAAATGGTGACCTTGACACGG
GCGACAATTCCATAAGTGACGTATACATCGCCTGTTTTGTGGGTTTAGTGTGTAGAGACG
CTTGTAAAGGCCCAGCGTGTGATCGTGTGATGAGCCGCTAAAGGATGCATTTGCCGTATG
AGTCGCGGGGCCGACGCCGCCGTGAGATGGCAGACCTAGAGCCCTGGTGGCTGCAGTCTA
TCATCGAAGAGACTCTCTCTGAATACCCCGATCTAGTTAAAACTGGCAGTCCTGACTACA
TGTGCTCTATATTACCACAGCACTGGCGTTCAAATAAAACTCTGCCCGGTGGTTTCAAAG
TGGTCGCCCTTGGAGACGTTCTGGACGGAACCCTGGTGACGGTCAGAGCTGGCAACGATG
AAAACTGCTCCGCGGAATTGAGGAACAACTCTGCCGTTATGAAAAATAGGGTTGCCAAGT
TCAATGACCTGAGGTTCGTCGGCAGAAGCGGTAGAGGGAAGAGCTTTTCGTTGACCATCA
CGATATCGACGAACCCGCCTCAAGTGGCAACATATCAAAAAGCCATAAAAGTCACTGTCG
ACGGACCTCGGGAACCTAGATCTAAAACCAGTACAAATACTACAACACATCCGATTAGAA
CGTTCGGATTCCAGCGGCCACTCATTACCTGTGATAGTGCTTCCATCGCCCTTCGAGATA
TGGAATATAAGACATCTACGTCTAGAACATTCAGATCACTATCGCACGAAGAACGTGATT
ATAAGACTAACGCAAACCTGCCCACTGGTGAGAGCAGCGGCAGCATACTAGGAGCGAGTG
AATGGAATACCGGCTATTCTTCTACTACGTCCATGTACCCTTCGTATAGCACCCTTCAGC
CTGCATATTACAAGCCTGAACCAGCCATACACATACCTGCGATCTTACCCGAATTACCTC
TTGGGCACGCTGACTATAGTGGGTTCCAGTCAAGTACAACTAGCTACAAAGGCAGCCCCA
GTGGAACGAGTTCATCACTAACCGAACTAAACCCAACAACGCCTGTTACTACGCAGCGCT
ACGACTCCAACTACTACAACTCGTGGCCAGCAAATTCGTACAATTACAACAATTACCAAT
ACAATAACATCAATAACAATCCCGCGTGCATACAATCTCACGCGCCATACATCAATCCCA
ATCCGCAAATGATACTACCGAATCTTTATTCAACTGTCAACCAAAATCAAATTCACGTAC
ACTTACACAGTTCCTCAGATAAATATAACTTAGAGCAGTGCATCCCAAGTGAGATTAAAA
TAAGTGATATAGACGGGGGTATATCTATAACGACAGAACTTCAGGGTACAGGGGAGCCGA
GTGGTATAGTCCAAACTTGCGAAGCCAACGATGAAGTGAAACACGGAATGTACGGCGCAG
GAAGTCAAGAAGTTTGGAGACCATATTGACGGTTCGTTAATCCTCAACAAAAACATTCCG
TTGTACATATTGTGATATAGGTAAAATGTAAATTTCCATGTTGTAGGTTATTAATGTAAA
GATGTTTTAAATTAATGTTAAACATTAATTAGATTTTAATTGTTAACAATTTAAGAAATA
AATTAAATGAAAAAATA
(2417 bp)

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