SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69546_c0_seq4
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_protocadherin-16_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007267 P cell-cell signaling
GO:0009653 P anatomical structure morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.64 TPM:1.11
ORF EntryO_BomoEE18827_3prime_partial:A_BomoEE_comp69546_c0_seq4
Sequence
(Nucleotide)
CTCATTTCGTGTTCTAGGTCAAGTATGTTATTAAATTAAAGTGATATATTAAACGTAAAT
TGTATTAGTTAGGTAATTACCACCGGCTCCACACGCGTTGTCAACGAGTAAACTACGATA
AGAATGGAATTTATCCTGATCAGCTTCAGACTCTGTAACTTCGGACTGTTTTAATCTCAG
ATTCATCAACTGTAACTGTTAAACGGAGGCGCGGCAAGATCTGCCCGGAATGCATCCGAA
TCGGTAGCGGCAGCATGCCTGCTCTCGCTCTCTTCCTCCTCTTGTTTCTCCTGGATACAC
CTTCCAGTTTACGCGCTCAAGCCATACAAGACAGCAGATGCTATCTGATGAATGGCGGCG
CCGTGGAGAGCTTCTTCATCAGCGAGGACACACCCATCGGCAGTATTATAGGTACCTTAA
GTGTAAATGGAGATCCTTCAGAAGACCTTGGAGACATCACCCTTCGGCTTCAAGAAAAGG
GAGCAGCAGTAGGCATAGTGCCTGGTAGCAAGAACTTGACACTGCTCAGAGCTTTGGATC
GAGAGGAGAAAATCGGCCCTTCTAATGTATACGTTAATGTACGGTGTGACAGAAGACGAA
CTACTGATCCGAGCTTCGTGATCCCGGTGTCGGTGCGCGTGTGGGACGTTAACGACAACG
CGCCGCAGTGGGAGGGCGCGCCGTACGCCGTGCGGGTGTCGGAGACGGCGGCGAGGGGCG
CGCGGGCG
(728 bp)

- SilkBase 1999-2023 -