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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69471_c1_seq6
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
Transcript
Level		FPKM:17.90 TPM:31.22
ORF EntryO_BomoEE18624_complete:A_BomoEE_comp69471_c1_seq6
Sequence
(Nucleotide)
CGCGCATGTCAGTGGCCGGCATTAGACAACAGTTTCAAGTTTTTACATAGATGAGCCTTT
TCCGTTTGACTGTTTCGATAAATACACCTCACCCCTAACTTACATTATTAGCCTGTGATT
GTGCATCAGTGTACCTATTATCCCATGTTACATACTCTTTGTATTATCCTATGATCTGTG
CTACTTAATTTTTATTTACTAATTACACCGTACGTAAATTGTCGTAAATACATATTCTAA
ACAAGTAGGTATCAGTAATGCCTGGCGTTGAAGCAATATTATCAGACGAAGATTTTATAA
TTGCAAAAGCAAAAGATGCTCAGAAATCTGACATTTTTGCAGCAAAAGCATGGATGCTCA
CAGCGAAAACATTATTTCCGACGAATTTTAAAATTCAGTTTGAGGCATATTTGATGGAGA
AACAGTCTGGAAATGTACAAGAAGCCGCAGAATGTTTCAGTTCTTTAATGCTTTCAAGAC
AAAATATGACTGCGCTTTTACCAGAAATTTCTGCAATCGCTAATGCTCTTAGATCAGCGG
AAGGTAGCTTTTTGTGTCAGATGTTTGATCATATTTGTCCCGATATACAGTTAACAATAT
TGAAGACAAGTGTAGAAAACAGTGATGATACGACAGAGCATTGTAAATTACTTGTGTTAT
TATTAAAAAAGTTTCCACAACTAGGAGTGGATAGTTTGGTTAAAACTTTAATTAATGCTG
AGAAATTTTTCTACGACAATAGATATGCTAGGCTTCTAGTGGTAGAAACATTGCCATTGC
TGAGTTCCTTGGAGTCACCAAGGTTGTTACAAAGATTGCTAATTAAAGCTATTGATTTTT
ATAATTCTTATGTATATGATCAAACTGAACATGACATATCTGACCCATGGCAAAGATTGT
ATGGAGTGTTGGATTTATTGGGAAGACAGCTTTGTTGGGACCCTTATCTTGTTAATTACA
GCAATAGCCTGAACAAAGAAGCATATTTTCAAAAATTGTTGACATTGAGGAACAGTGAAG
ATTGTCGTCAACTATTGTTCTGTGGAGTAACTTTTTTTCTAAGATCCCTTTATGAACAAA
GATTATTAAAGGGAAATCATATACTTGTAGAGGCTCTTTCGGACCCTGATATGCCGCAGT
CAAAAAGAAGAAAAAGTGATATAGAAGTTACAGGTATTTCAGCTCATCAGTTTCAAGTAG
CTGCAAATTGTTGGGAGCTTCTACATAACAATGAAGTAATATCTCGAGAGTTTAATAAAT
TGGCTAATCAGCTTCAAGCTAAGCCATGGGCTGAAGGTTTTGCAGATGAATTAGCTCTGT
ACAGAGGTAGATATGATGAAGCTTTACCATCAACTACTTCTAACAATATGGTGTCATGTT
TGATGAAAATCTCAGTTTATTTTAGTCAAAAGAAATATGCAGCCAGCATTGAAAGTATAT
TGGCGGCTTTGCCACAGTTACCAAATGTAGAGGGAATGTTAGAGGCTGAATTAATTATAG
GTGGTAAACAGAGACATTTACATTTTTTACCTTTAACAAAATTAGCTATTATGCATTATA
TCTGCACATTGTTAATCAGAATATTGTTAAACACTGGAAGCAGTTCTGACCTCATCTATG
GCCACATCATGGTTTTAATGCAACTAGGTTGGCCACAGGAAGAGTCTATTTTTATTCACA
TATTGGAATATATTAGACAGAAAGGAATATTTCACTATCATTTGTTTGCTTCATATATTA
TACACATTGACATACTTGAAGAGATTTGCTTTATGTGGAATGAACAGGGGAATAATATTG
TGTTAGATATTTTACCTAATTCACAGCAACATGTAGGACAGAGAAGAATAGGTACCCGTG
GTGCTGATAAAGGAGTGAAAGAGGATTTTAAACAAGCATTGAAAGCTCAGGTTACACGCA
GCAATGAATCAACTTTAAATTTAATAATACAATTTATTACTTCAGAGCGTTCCTTTTTTC
TTCAAGTAGTATAGTTGTAATAAAGTCAATGTTTCTGTCTTAATATTTTTAATTTTTTAT
AATGTAATGTCACTTGTATTTCACAAGTACCCAAATATAATTAAGCACTGCTCTCATATG
TGCCAACAGCAAGTAGTAAATTGCGTCTTGTAAAATGCAAGCCTTTTACAGGGGAACTTT
TAGTGGCAAATGATTGTAATAGATATTTGTCTTCTTTTGGTATAGGGTTATTTAGAGTTT
CTTCAATGGGAGATTCGTCTGTTATGGCTGTGAAGTCCCACAATTTTATTGTACAATCCA
ATGAGCCTGACGATAGAACTGTTCCATCACGACTGAAGGCTAAGGCGTGTATGGGAGCAG
TATGTGCCGGGGGTAACGAAGCGGCTGGACCCCCAGTAGATAAATCCCAAACCATCATAT
CTCCACCACTGCCACCAGAAGCAATCCATCTTCCACAAACGGAAAAGGCCAACGTGAAAA
TGGTTGACTTATGTCCTGTCATTATTCGAACTTGACTACCAGTTAAACAATCCCACAGTC
GAACTGTTCTGTCGCTAGATCCAGTTGCTATATAATTTGAGTTCGGGTGGAACTGAATAC
AATCTACATCCGAATAATGTCCTATAAATATCCTCAGTGGAAGGTGGTGATCAGTCGCCC
ATAGTCGAGCAGTACGATCATGGCCGCTGGAAGCAAAGTAGTGGCCATGAGGGGACCAGC
GCACATCCCAGACCGGCCATACGTGTCCACGGTACACAACAAGACACGTCCAACACTGTA
GTGACCACAATCTCACAGTTGTATCCTCAGAGCACGAAAGCAGCATTGTTTTAAAAGGAT
CAAATGCAACTTTATAAACGGGGCCGGAGTGCCCAAAAAGGTTGCGGCACGTATCACGGT
CCTTTTCCTCCATCATCCTCACGAGTACATCACCTGCTTCCCTGTCTATATCTTGTAGTT
TTTCTGCAGATTTCATTCCTCGCAGTTTAATGGGAGTCAATGTCCATACCTTTATGTTTG
AGTTATTAAATCCCACAGCCAAAAGGGTGGAATCGTCACAAATATCACAACTAATTGCAG
TATGTCCGCTGTTCAGTAATGTATAGAAACAAATAGAGGGCAAGCTGTCTGGTCCTAGCT
GAACACGTTTTGATGCTTCTCTGAGTGCTTTGCCTTTCTCTACTTTATCAATTTCTTTTA
GATCTGGTAGAGGGATCCTGTCATTAGGAGGTGCATTTGGGTCAGATTTTGGTTTCTTCA
TAAAAAGATTATCTTTTTTCGCTTTTTTCTTTTTTGGTTTGTCAGGGGTTTCTTCTACTT
CTTCTTCGTCTTCTACCGGAGCCGGTAGAACTTGAATATCGGGCTCTTTCAGGAGCCCAT
AATACACTTTGGTGCGATTTTCACTTTTCATTGGTTCTCCAAGTACCCCTCCAGCTGTAG
CTCGAACTTGTGCTTGAGTTCTTCCTGGACCATCATGGACTTCGATTTGTATATGATTAT
TTATTATATTTATTATTACTGAGGAATTTTTCTGTTCGTGTAAGTAACGTTTCAGTTGTG
AAGATGCATCTCTTGATAACTGAACTGTAAATTTATTTGTGCTGTATATTTCTGCTAGTT
CATTTCCTTTTATCTGATCCTTATGTTTTACAATAGACAACTTTTTCAAGTCCTCTTGAT
AGTAATCTTCTTGTTCTATTCCAAACTTTTCCAAGAAACTGACAGCGTGTTCAACATGAT
CATACAGTATCAACAGAAGATACATGTGAACAAACACAGGATACAATAGTGTGGACAATT
CATACTTGTACAAATCTAAAGAATTTTCAATAAATTTTTTTAGACCGTCGTACGCCAATT
CGTACGTAAAGGGGTCGCTTTCAGTGTGATGAGCGGTAAGAATGCTCGCTAGTTCTACTT
CAGGAAGATCTAAGCTTTCACATTCGACGTCTCCTAGACTAGCTTCTTTTCTTAAAATGT
CTTCTGTACTCTTTAGATTGTACTTTCTAAGTAACTGTAAAACAGCCAGCAGTGGGGTTG
ATTTCTCACTCATCTTGGAGATTCTGCAAGAAGCTGAATTGTTCAGTAATTAGTAAATAA
TGGACAATTAAAAACTTGTTGTTTTAACACTAACGCAGCGTAACGATAAACATGTTTATA
GTCGGATTTTTAATTAGACG
(4160 bp)

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