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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69450_c0_seq3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		Vacuolar_protein-sorting-associated_protein_25_[Operophtera_brumata]
Ontology
GO:0000814 C ESCRT II complex
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0007293 P germarium-derived egg chamber formation
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008593 P regulation of Notch signaling pathway
GO:0010008 C endosome membrane
GO:0010669 P epithelial structure maintenance
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0019233 P sensory perception of pain
GO:0030154 P cell differentiation
GO:0030713 P ovarian follicle cell stalk formation
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043328 P protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0045199 P maintenance of epithelial cell apical/basal polarity
GO:0045450 P bicoid mRNA localization
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060429 P epithelium development
GO:0070086 P ubiquitin-dependent endocytosis
GO:0097352 P autophagosome maturation
Transcript
Level		FPKM:0.57 TPM:0.99
ORF EntryO_BomoEE18584_complete:A_BomoEE_comp69450_c0_seq3
Sequence
(Nucleotide)
CATTTTCACTGACATATTAATGCTAAATGGCTGAAATACTACTGCCTGAAAAAAAAAAGT
TTGTCTGTGATCAAAGAGGTCAACGACACCAAGTATCGACAATCGACTTTTCACGAACAT
CAAGTCAATTTTGTCAAGTCGTGAAAACAGCTGGAAAATTACAAGCATTTTTGTGTAGTT
AAAAATCTTCATTAGTCTTTTATAATTATTCGGTTGTGTTTCACGAGTATGGCAGAAATA
TCGTGGCCTTGGCAGTATAACTTTCCCCCGTTCTTTACGTAAGTAAATCACATTTATTGC
TAACACACCTTGGTACGTATTCACTAGCCATGGAGGTGTTCGGGAAACAATGCAAATACA
TCAACGAAGGGAACGTCCATATCGTTCTAGAAGTTGTCGGAACTGATTATGTTCTGCGGC
TCATCAAACAGGACGGGCAGCAGATAAACGTGAATGACGTCCGAGATTCAGTGAATTTCG
TAAATTTAGTCATGATACCGCTGTTAAATAACAATTTTCAATGCAAAGAGGTCATTGTGA
CTATGGCAGAAGAGGAAGCGAGCAGATTGAGCCACGCCCTTTATCACATTCGACCCACTC
ACAGACACTTCAAGTCCATTCTTAGTCAGTATGCAATTAGAGCACCGAATCTTGCCCTGG
TCAGTCCGCTGTGCGAGACCAACTACTGCGTCGAAATCAAACCGAAGGAAGGTTTCATAT
CCAAATCGCTCTGTGCTCATTCTAAATGCTACTTTTGTCTAAAACAATACTTGAAAGTAG
AGACAAATAAAGTTGAGAAACACAGTTCATATTGTCCATTAGATCTGTTCTCCGGAGATA
AATACAGAATGCGCGATGCTCTACTCCATCTCATAGAAAACCCTCAGAACAATTTCAAAC
TTTTTAAGAATGGTGTGGTCATTTATGATGATAAATCAGATTTGAAGACTTTTCATAATA
TAATTGAAAGAATAAATATCTTTGGCACGACTGATGGATTTTTAAATTTCATCATACAAT
TGTTACTGGCTGATGATTTTAGTTCAGATTTAGACCTCAAAGAAACTAAAGCTAGTGTTA
AATATTTCAAAATACAAAAAAGGAATGAATGTGTCGATGATTCCATTTTGACTTCCAACA
CATTCCTGTACAAACTGCTAGAGCTTCAGAAGCTTGGGGACAGTGTTAATTTTGACGTAA
CAAATTATTTGAAACATGAAGATGGAGGATATGTCTCGATGATAATAGAAAATGCTGCTA
ATCTGAATCTCGGTGAAGCCAAAGACAAAGAGCACTTCTTTAAAAATTTGGAGCCTGTAC
ATAGGGCATTGATAGCTGCCGTGGCAAGAGACTGCTCTATAATGATCAGCTTTTCTCCAA
ACTATGTGGAGAACATTCCGTGTGTCCAAAAGAAGGAACACAAGATAATGTACAGAGTTT
CTGTGACAGATCTGGAACCAAAATCTATTAAAAACTTAGTTAAACGAAAAGAGACTGAAA
GTGAAATGATTGAGATATACCAGAGGTATATGAAACAGAAATGAGTGAAAGTGTAAGTAC
TATTAATTTCCACAAATGTCCATTAGTTCCCTTGTTATTGTTGGCTTTTCCATGTAAAAC
ATTTTTAAATTGATTTGCTCTGAATGCAATTGGCTTTTTAATTTTCATCCTATGTTTATT
TGTTAAAGTTAAGATTTTTATTTATTGTGTTACAGGTAATAAAATAGCAAAAGGCTTAGG
ACACAGATAATAAAAATTAAGTGTCAACCTTACCTCAAGATAGAACCCAATTATTATTTT
TAACTTTTTTAGTATTCACATTATAATATAGATAATAAGTATCAAATAAATTATATTTGA
AACATAAATAATGCAGACAATTAGAAATAGGTTCATTTTGTTACAGAATCCAACCGCACA
CTGAGACAAGATCTAAACAACTAGAAGCATGGGAACAATTAATAACAGATTATTTGAAGG
CAACAAAACAATCTACAATAGATATCAGGGAGGCATCAAACACACCGCTTTTCAATAACA
TAGAAATTAATAGAAAATTGTCTCAGGAAGCTATTTTAACAATATTGGAGGACATGGCTA
AGGCTGGCAAGGCCGCTCCCATTGACAAGAGCAAAAACGTGTGGGAGGTATATTGGCACT
CGCTGGATGAGTGGGGAAATATGATTTACAACTGGGCATGTAATAATGGGTTTAATAATT
CAGTTTGTACACTGTTTGAGCTGAGAGAAGGAGATAATACCGCTGACCAAGAATTTCATA
ACCTTGATATGAATGTCCTGGTCAAAGCATTAAAGTCACTGGAAGCCAAAGGTCGATGCG
AACTCATGGAATTTGATGACAACCAGGGTGTAAAGTTCTTTTAAATGAACATATTAAGGA
CGAGAACGGAACTGCAGCATGGATCCAGCAAAGGTCATAGCTAGGGGACTTTTTACAGCC
ACGTCAGCCTCATGTAGCTGGTAAGATCATGTGTAACTCATGGAATCATAACTAGGGGAT
TTGTTTAAAGCCATGAACTCATTCTGCCAAAGCTATTGTGTTCGGATTGGAGCATTTTCA
CGGACATTACCATTAACAAAATTGCATAGAGAATATTAAACATATTATCTGTGCTCATAT
AATTATGTATTAATAAATTGACTTTTTTTAAGTGACATGTGTAATTTAAAACTTGTATAC
TGGAATGTGTAAATAAATATTTTCTTTTAATTTAAAATAGGGAAAGTGCATTTATATTGT
CGTCTCATCTTACCTACACATAGGTAGTCATTATACAAAATAATTTTCAATGTTATTACA
TATTTTATTACAATCATAAACTAATGGTGTATTCAAATTTTTTTGATGGTCTAGTTCTTA
CAATTTATAAATAATAATGTAGTTTCATATGTGTGTGTTAGATAAATTATTAATATTAAT
TAATGTTTAATGAATATTATGTAATAGCGATTGTGTTAAAACACATAATATGTTAAAATT
ATTTGATGTTACATTGTAAGATTAGATTTCTGGTCATTCATAATAGTTTAAATTCACTTA
GAAGATTTTAATAAACAAATATAACAAGATCTTGTAGGATAAATTTTAGTGTGCAATTTT
TAGTAGAAATACAATATAAAAAAATACATATATTATTGATAAACATGTTTCCTGATTGTG
TGGTCATCAGTTCACAGTTAATGTACCGAATAATTAGAGTTATTTAAAAACGTAAAAATT
AAGGTTATCTGTGTAACGGGACGTTTCGGAATGCACAAATAGCCTTTCTAGTATTGCCAT
AACATAAAAAAATGCATCACGGTACAAAAATATTTTCAGGCTGTTAATTTTCAGAGTAGG
GTCTGTAAATTACTATAACACTTGGCATTCATAACGGCGAAATTAATTTTAACTTCGTAC
AAATCTGTATTGTTCGGACGGCAGCCTGTCCATGGGCATAATTTTATATGAAAATATATA
CTTCAGTTTTCGCAAGCCGTGAACATAATGAGATACTTTTACGGCTTAATACAATTAGAC
GGTAGTTGCAAAATATTTCCTGGTCCGTAGTGACTACGAAACGTGTTAAATAATAAAAGC
GAGATTAAAATGTAAAATTACTTTAAATAGAGTATGAGTTTTGTTTTTGGATGTCATAAT
AAACTTAATTAATACAAGGCTTGTCTCGCTGGGTAGTCTGTCTGTAATATGGATGTTATT
AACACAGGCTAATTGGGACTCAATTTTTTTTTTCCAAAATATACAAATACTATGTGTCAT
CTACATTTTACAACAGCCGTTTTGATTGCCAAATAAAATAAAAATTACACGTCATGTATT
TTAATGAAATAAATATGTACAATAGACTATTTATTGGCGGCCTTTGCTATGTTCTCGGCC
TTACTGCTTTTTCTTAGGATAAGTACATTTTATTATCTATGGATGTAATAGGCATTTTTA
AGTGATATTTTCGATGTTAATATATTGATGTATTTTAAAAAAAAAAAA
(4008 bp)

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