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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69411_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_fibrillin-1-like_[Bombyx_mori]
Ontology
GO:0001501 P skeletal system development
GO:0001527 C microfibril
GO:0001656 P metanephros development
GO:0001822 P kidney development
GO:0005178 F integrin binding
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0007507 P heart development
GO:0022617 P extracellular matrix disassembly
GO:0030023 F extracellular matrix constituent conferring elasticity
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0032403 F protein-containing complex binding
GO:0035582 P sequestering of BMP in extracellular matrix
GO:0035583 P sequestering of TGFbeta in extracellular matrix
GO:0043010 P camera-type eye development
GO:0048048 P embryonic eye morphogenesis
GO:0048050 P post-embryonic eye morphogenesis
GO:0070062 C extracellular exosome
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:0090287 P regulation of cellular response to growth factor stimulus
GO:1990314 P cellular response to insulin-like growth factor stimulus
Transcript
Level		FPKM:0.78 TPM:1.36
ORF EntryO_BomoEE18494_5prime_partial:A_BomoEE_comp69411_c0_seq1
Sequence
(Nucleotide)
GCAACACCGCCGGCTCCTACACGTGCCTGTGCGAGCCCGGCTTCGCCCCCACAGCGGCCG
GCTACTGCGCCGACGTGGACGAGTGCGCCGCCGACTCCATGTGCAAGGGCGGGCGCTGCG
TGAACAGCGAGGGCTCGTTCCAATGCGTGTGCGAAGCGGGGTACCGGCCCACCGCCACCC
GCGGCGCCTGCGTGGACGTGGACGAGTGCGAGGAGCAGCGCGTCTGCCGCAACGGCCGCT
GCCACAACACGCCCGGCTCCTTCCGCTGCGAGTGCCTGCCCGGCTTCACGCTCAGCAACG
ACGGCAGGACGTGTCTAGATGAGGTTCAAGACTTATGTTACGAGAAATACGAAGAGGGCC
ACTGCACGGGGCCGGGACAGAACGCGGTCACCAGGTCGCAGTGCTGCTGCAGCGCCACTA
AAGGTCTAAAGCTAGGCTGGGGCGTGTCGTGCCAGGCGTGCCCGGCGCAGGGCAGCGAGC
TGTACGCGGTGCTGTGCCCCGAGGGACCCAGCAAGGACAACGGCGGCGCCGACATCAACG
AGTGCACCGCGGTGCCCGGCGCCTGCCCGCACGGCTCCTGCGAGAACCTGGAGCCCGGCT
ACCGATGCATCTGCGACCCCGGCTACCATCCAGACGCGGACGGACTGTGCCGGGACATCG
ACGAGTGCGATATGCACCAATCCTACTGCGCGGGCGGCCAGTGCCGCAACACGGCGGGCA
GCTTCACGTGCGTGTGTCCCGAGGGCACGCGCCACGAGCCCGAGCTGCAGCTGTGTCGGG
ACATCGACGAGTGCGAGGAGCTGGCGAGCCCGTGCGACAACGGACGCTGCATCAACACGC
ACGGCGGCTTCGAGTGCGAGTGCGAGCTGGGCTACGTGCTGGACGCCACCGCGCAGCGTT
GTCTGGACAACCGGCGCGGCTCGTGCTGGCGCCGCGTGGTGGACGGACAGTGCGAGGCCG
CCGCGCCAGAGCTACTCCTGCGCCAGGAGTGCTGCTGCAGCGTGGGGCTGGCCTGGGGCT
CGCCCTGTGCGCCGTGCGATCCCGACCACTGCCCCTGCCCCAAGGGATTCGCCAAGCTGG
ACGGCGCCACGTGCCGCGACGTGGACGAGTGCGCGCTGAGTGCGGAGCTGTGCGCGGGCG
GCACGTGCGTCAACACGGACGGCTCCTACCGCTGCGACTGCCCGCCCGGACTCACGCTGG
ACTCCACCGGTAACCGCTGCGTGGACCGGCGGCGCGAGTCCTGCTACACGGAGATGACGG
GCGGGCGCTGCTCGGGCCCTCTACCCACCGACGTGCTGCGGGCCGTGTGCTGCTGTTCAG
CCCTGGGCAAGGCCTGGGGGAACCAGCGCTGCGAGCCCTGCCCTAAGAAAGGAACGGATG
CCTATCAAAACCTGTGCATAGCAGTGGGCACTCTGCTACCGCCGAACCAGTGGGACAGAC
CGATCGACGGCAACATGACCGACATCTGGTCACAGGTCGGAGGAGACGAGAACGGGGACG
GGTATGGGAAACAGTGGGGTGAGAATGGTAGCGACGGAGGTTGGGATACCTGGGGGAACG
GAACCGTTGGAGGAAACGGACCGGGACTGATCCCCGGACAGATGGAAGTTAACGAGTGTG
CAGCTTTCCCTGGACTCTGCGGCCATGGACGCTGTAGAAACCTGCTTGGCGGGTTCACTT
GTGATTGTTTCCCTGGATACGAAAAGGATTCAAAGAACCACACGTGCGTGGACGTGAACG
AGTGTGAGATCGTGGACGGCGTGTGTGGTGACGGCGACTGTCACAACACTGAAGGCAGCT
TCACCTGCCACTGCCGTCCTGGGTACAAGGCGGACGACTTCTCCAAGATATGTGTCGACA
TAGACGAGTGCGCGGACAACGACGCGTTGTGTCGCGGCGGCCGCTGCGTCAACACGGCGG
GCTCGTTCCGCTGCGAGTGCGGCCACGGCATGGAGCTGGCGCCCGACAGACTCTCCTGCA
AGGACATCGACGAGTGCTCCATCACCTCAGGTATCTGCAGCAACGGCGCGTGCGAGAACC
AGATGGGCACGTACCAGTGCGTGTGCGACGAGGGCTACGCGCAGTCCACCGTGAAGTCGC
ACTGCGACGACATCGACGAGTGCGCCGAGGACGCCGCGCGCTGCCAGCACTCCTGCGTCA
ACACGCCCGGCTCCTACCACTGCACCTGCCGCGAGGGCTGGCACCTGCGCGCGGACGGGC
GCTCGTGCCGCGACATCGACGAG
(2243 bp)

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