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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69370_c0_seq3
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_afadin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0008022 F protein C-terminus binding
GO:0017016 F small GTPase binding
GO:0030054 C cell junction
GO:0034332 P adherens junction organization
GO:0043547 P positive regulation of GTPase activity
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:10.61 TPM:18.51
ORF EntryO_BomoEE18396_complete:A_BomoEE_comp69370_c0_seq3
Sequence
(Nucleotide)
GTTCTCGTTGGTGACTCTGTTCAGTGCGGTTTACTCGACGTCCGTTGGTTGTAATCTAGT
TGTTATAAGAGTTTTTGGGATGCCAATTTAATAACGTCATCGAATTCGAAAAAAATTAAC
AATGATATTGTATTTACATAATTGTGGTAATTAAAAATAAATCAGTCTGAAGCCGGTAAT
CTTGTTGTGTTGTGATTAACTTGTGATAAGTGTTAACGGTTCTCTGAAGTACTTGTAGTT
AAAAGTTTTGTATTACAGAAAAGTTTTTGAAGTGATTGTTCTGGTGTTTTTGTTATTAGA
TTACGTAAAAAAATGATTGTGCTTACATTTGAAGATGTTACTAGTATGGCGTAGATTTTT
GCTACACTCACGGCTGTCAATGGACATCTAGCCACGAATATCCTGCATTAAAAAACTGGA
CTTGATGCGGTGACACGATGGACCCAGCGGACAAGCGTATGTTGGAGCGTGAAGCGCTTC
GCAACATGATACACCAATGGAACGCCAACCGGCTCGATCTGTTCGCGCTCAGCGAACCCA
ATGAGAATCTGGAGTTCCACGGTGTGATGCGTTTCTACTTCCAAGATCTGGGTCAGAAGA
TAGCAACGAAGTGTATCCGTGTCGCCTCCGACGCCACCGTCAGCGATGTCATAGAGATAC
TAATCGAGAAATTCCGTCCGGACATGCGTATGCTGTCACTCGGCTCGTACTCGTTGTGGG
AGACCCACGGCCCCGACGACGAGCGCCAGCTGGAGCCGCACGAGAAGCCGCTCCTCGTGC
AACTCAACTGGCACGCGGATGATAGAGAAGGGAGATTCCTACTTAAGTGCCTTACTAACA
ATGAAGCCTCCGTCATAGGATCCGACAAGGGAGACCAAAACTTCAAAAGAAAATTATCCA
AGAGAGAGAAAAAAGAATTGAAGAAAAAAGAGAAGCTGTCGAGATTGAAGTCTGATACTA
ACGATGAGAATCGACCCGTTGCCGAAAAACTTTACACAGAACTGCCGGAAACATCGTTCA
TGAGAAGCATCAGTAACCCTGAAGCGGTGATGCGTCGTCGTCGACAACAAAAGCTAGGGC
GCAAGCTACAGCAGTTCAAGTCGAAAGACGGAGGACCCGATACCGGAGGAACGCTGAGGA
TCTACGGCGGTATACTGAGACCCGATGTTTCGTACATAACGCTACTCCTGTCGGTCAACG
ATTCGGCGGCGACCGTTCTTAAAGAAACTCTCGAAAAATACGGAATGGGACATCAGGACC
CTCAACAGTTTTGTATCGTTCAGGAAGACAAGACTGACAACACGGAGTACATACTGGAAG
ATGACGAGTGTCCGTTGGCGCTGATGAATATGACTCGGAGCTCTATCATGTTCCACGTGC
GGCGGCGTCCGGCGGACTCACAGCCACGGCGACGGAAGAAGAAGGTCGGCACAGGCACCA
ACGGGCGTCCAGGCAACGAACCTTTACTTCTGGAGGTCGCGCCCGACGCCACGCCTCTAG
AGAATGGACGCAGAATCCGGATTACCGATGTCGTCGAGGTTGGTTCGGGAAATGGCACCG
CCCTGCAGCTGTACGGACCGTCGATACAATCCCGGCATTGCGTGGTCGCTCCCGCTGACG
GTGGCGGATACACCGTGACTCCGCTACACGCGGACGCGCAAGTCTTCGTCAACGGACAAA
GGATCATGCACACACAGCGATTACAGCACGGATGTCTGCTGAAATTCGGGCGCGTATCGA
CTTTCCGTTTCGTGGACCCCGCCCAGGAGAACCTGATCAACAGGAACTTGGCTCAGTCGC
AGTCAAACTACGGCTCCGGATCCATATACGACAGGTCGCCCGCGTCACCGGAGCCGGGCG
GCGCGATGTCCCAGCAACCGGACGCGCTCGACAACAACGCCAACGACGAGTACCACCGCA
CCGTCAGCCCGGTCTCGAACGACCACTACTACAGAGACTCGAACGAGATCACGCCGTACA
ACAACAACAACACGCTCAAACTCGACAACGAGTCGCTGATGATGTCGCAGCACCTCACCG
ACTCGAAGGACGAACACACCGGATCGATTTACAACGATCACGATCAGAGCACAAACGCGA
ACCGCACCGGGAACTCGCAATACAAAGATAACTACGAAACCACGTTCGATTTAGACGGAA
ACGTTGAAACGAAAAGCATCTGTAGCGCTAAAAGCGGAGGTTCAGGACACGAGAACAGGA
TGGGTGCTGGTCGAATCGGCCAAGAAGCGATCCTGCCGGCCGTGCTGGAGTTCCCGGAGG
CGGGACAACAACAGTTCCTCGCCGCGGTCATCACCAGGCTCGATCCTCATGCCCCGGCGT
TCAAACTCGCGCCCGTCTACACGCTCTATCTCTGCGCCAGATATCGTGCTTCAACTCATT
ACCGGCCCGAGCTGACGCCGACCGAGAGGGCCCACAAGCTGACCGCCTTCCTCCACCACG
TCGCCACACTCATACACGCTACTGTACAGGAACGCGCTAGTGACTCTGCAGCTCAAGCGT
TCTGGATGGCCAACGCCAGTGAACTGCTGCACTTCCTCAAATACGACAGACATATCTCCT
CGTTCTCAACGCAAGCTCAAGAGTTACTAGCCATGACTGTACAAAACGCGTTCAGTAATC
TGGTGGCGTGCTTCGAGGAGAGTCTGGGTCGCGCCCTGGCGGCTCTGACGAGCGGCAACA
GCGCGGAGGCGACGGCCGCCACCGAGCCCGCGCTGCAGGCGCTCGCCGCCGCCATGGTGC
TGCTGCGCCGGTGCAGGGTCAACGCGGCGCTCACCATACAGCTCTTCTCGCATCTCTTCC
ACTACATCAACGCCGTTTGTTTCAACAAGGTGGTGAGCGAGCCGGGCTGTGTGAGCGCGG
CCTACGGGCGCGCGCTGTCGGGGCGGTTGGCGCTAGTGGCGGCATGGGCCGAGCGGCAGG
GACTCGAGCTAGCAGCCGACTGCCATCTGGCGCGAACGCACCAGGCCGCCCGGCTGATAC
AGGGCGAGTATCGCACCGCAGAGGAAGTGCGGGCGGCGCTGTCGGCGTGCTTCAAGCTGA
ACTCCGCGCAAGTCCGAGCGCTGCTCGCGCCCATCGCCGCGCCCGAGGTCGTGGAGGCGG
CCGTGCAGCACGCGCGGGCGCTCGCCGACGAGCTGTGCCGGGCCGACGGACGAGAGATAC
GAGTCGAGGAGGGCGGTTGGCTGGGGGCCGGACTGCTGATCCCCGGGGATGGGTTCAGCG
CGGAGGTGGTCCGCGGCGTGCCCCCCGGGCTGGCGGAGTTCGTGGCCCCCCTGCAGCGGG
CGGGGCTGTGTCGGCTCGCCCACCAGCCGCACGCGGTCGGCGCGTGGACCGTGTACATGG
GCCGAGCGTCCCCGCGACCCCCGCCCGTCCCCGACCGACATATCCTGCAACTACATAAGA
ACGCTAACGGCATGGGACTCAGTATAGTCGCCGCAAAGGGTGCAGGCCAAAGCAAATTGG
GTATCTATATAAAGTCCGTAGTGCCGGGCGGCGCGGCGGCTGCAGACGGGCGACTGGCGG
CCGGCGACCAACTGCTATCCGTTGATGGACAGTCGCTCGTTGGTATCACACAGGAAAAGG
CGGCTGAATACTTAGTAAGGACGGGTCCGACCGTCACTTTAGAAGTCGCGAAACAAGGAG
CTATGTTGCACGGACTAGCCACTCTATTACACCAACCGGCCTACAACAATCAGCGACCAG
CGGGCGGCGGCGCGTTGCGTCGTGCGTCGGAGCGCGACCTGCCCGCGCGGCTGGCGGCGG
AGGCCGTGAAGCCCAGCAAGAGCACGCCCGCCCTGCACCACGCCGCACCCGTCCCGCACA
GTAGTGTAACGAGCCCGAGCGTCCCGAGCGCCTCGCCGAGCGTGTGGCCCAACAAGTCGC
GGAGCAGCCACAACCTGTCCGCGACCTCGCACCACGACGGCTTCTACCAGAACCTGCCCG
CCGTCAGCTCGCAACAGTACCCACTACAAGACAGGTGGTCGTCGCTACGCAGTTCCACTG
GCAGCAACCGTCCTCAGTCGGCACATTTTTCAGCAGCAAACCCGCAAGAACAGGCGCCTG
ATTCTCCCCTGCACCAGGCAAACCATGGAAGCACTATGAGTATACGTGCAGCGAAGCTAG
CTGAGATGTCAGAGGAAGTTACGCGTCGCCAACAGATGCAACAACAACATCAACTGCAAC
AGCAGCAACAACTACACCAGCAACAACAGCAACAAATACACCAACAGCAGCAACAACAGC
AACATATTCAGCAGCAACAACTTATCCAACAACAACAATTACAACAGCATATTCAACAAC
AACAATCGCAGCTGCATCAGCAACAACAACAACATTTACATCAGCAGCAACTACATCAAC
ATCAAATGCAACAGAGGATGCCATCATTACCACATCATCATCCGCAGATGAACAACCTTC
ATTCTCACGGACAACCACCACTGTCGCCGGGCTCGACGCAATCTTTGCAGTTCCAACAGC
AACCTTCCCCGCAGCCCCCGCACCCCCCGCAGCACGCTTACAGCCAGCACGGTCAGCCAC
AGAGATATGAATGGCATCCGCCCGGTCCTCCGTCGCCGCAGAGATCGCAGCCGCCCGTAG
CTCCCAAGCCACAAAATGTAAGAAGACCTGAAATGGAAATGGAAGAGCCTTCACATCAAC
AGCCTCCGCAGATGATGAATATGCAACCGGATGAAGAGCGGCAGTCCGGCAGCGCTCTGT
ACCCCGCAAGCCCCTGGCAGCGCGAGGAGCGGGAGCGGCAGGCCGAGGTGCGCCGCGCGG
CCGCCCGCGCCCGCAGGTACGCACGCCAACACGCACCTGCACTACGCACACAATATTGTC
TACTATAGATAAGCGAAAAATCACTCACTCATCACGATATCTCACTTCCGTATCTTTATT
CGTTCACTCGAGTTCAACTCGACTAGATTCAACCTCCAACGCGCGTTTTGTTTGCTTGAT
CGTAAAAATAACCTCCACTCAAACGTCCCTCGAAAATTATCCTCGCCGGAATGCAGTAAA
TGAACTGTCAAGTCAAG
(5057 bp)

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