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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69370_c0_seq2
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_afadin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0008022 F protein C-terminus binding
GO:0017016 F small GTPase binding
GO:0030054 C cell junction
GO:0034332 P adherens junction organization
GO:0043547 P positive regulation of GTPase activity
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:0.56 TPM:0.97
ORF EntryO_BomoEE18390_complete:A_BomoEE_comp69370_c0_seq2
Sequence
(Nucleotide)
AGCTGTCATAACAGTAATATAAAAAGAATGAAATAATACAGACCAATCAACTTGGTACGA
CTTAACTTAAGCATTGGGTACAATTGCTTAAACTGAAATTTAAAACAAATCAATATTCAG
TTATAGAGATCAAAATCTTTAGTGAGGAAGATTTCACTAATGAACTATAACTGTAAGGGT
TATCTAAAAATCCAGTGAATAAATATAATATTATGTATAGTTTAATAAGAATTTTAACGT
AGACAACTTCGTATAGAAGAAAATTTACGACCAACGAATCAGATAGGAAGTTGAGGTATT
CTTAAACGTTTGCTCTGTGCTCTGTTGAGTTCAGTAATTCTGTGAGACTCCTCATGGGTC
GGACAATGCTCGCGGTGGTTCACAATGGGAATACACGGTCGGGAACGTGCGGGCGCAGGA
CGCGGCAGTCGCCTAACAGACGCCGCACTGCGCGCCCCTGTACCGCGCCTCCGGCATGGA
TTGGGGTATCCGCCGTAAGTTTGTTTCCACAACTTTTATTTCGGCACCCGCCACACGTCT
GGCACTGGAACTCAAATAACAGCAATACCGGTCGGCCGTCAGCGTCGCTGCGATCGAAAC
CGATAGTAAACAAACGCATGTGGACCGGTAGAGTAGTCCGACCGGTGTGTCCGCTGATGC
CGGTCGACTGGTTGCTGTCGGTATTTTTAACTCGTTTCGTGGTTCGATGTCCGTTCGTTC
GCGGAATCGATATGCATAATATAGTTCTAAGTAGTTTCAACTTCGGCAATAGTTAAAGTT
TTATGGATTATCCGGACAGTGCACAATGGATGTTTGAGGAACATTGCAGTATTTTAGCTC
TATCATGTTCCACGTGCGGCGGCGTCCGGCGGACTCACAGCCACGGCGACGGAAGAAGAA
GGTCGGCACAGGCACCAACGGGCGTCCAGGCAACGAACCTTTACTTCTGGAGGTCGCGCC
CGACGCCACGCCTCTAGAGAATGGACGCAGAATCCGGATTACCGATGTCGTCGAGGTTGG
TTCGGGAAATGGCACCGCCCTGCAGCTGTACGGACCGTCGATACAATCCCGGCATTGCGT
GGTCGCTCCCGCTGACGGTGGCGGATACACCGTGACTCCGCTACACGCGGACGCGCAAGT
CTTCGTCAACGGACAAAGGATCATGCACACACAGCGATTACAGCACGGATGTCTGCTGAA
ATTCGGGCGCGTATCGACTTTCCGTTTCGTGGACCCCGCCCAGGAGAACCTGATCAACAG
GAACTTGGCTCAGTCGCAGTCAAACTACGGCTCCGGATCCATATACGACAGGTCGCCCGC
GTCACCGGAGCCGGGCGGCGCGATGTCCCAGCAACCGGACGCGCTCGACAACAACGCCAA
CGACGAGTACCACCGCACCGTCAGCCCGGTCTCGAACGACCACTACTACAGAGACTCGAA
CGAGATCACGCCGTACAACAACAACAACACGCTCAAACTCGACAACGAGTCGCTGATGAT
GTCGCAGCACCTCACCGACTCGAAGGACGAACACACCGGATCGATTTACAACGATCACGA
TCAGAGCACAAACGCGAACCGCACCGGGAACTCGCAATACAAAGATAACTACGAAACCAC
GTTCGATTTAGACGGAAACGTTGAAACGAAAAGCATCTGTAGCGCTAAAAGCGGAGGTTC
AGGACACGAGAACAGGATGGGTGCTGGTCGAATCGGCCAAGAAGCGATCCTGCCGGCCGT
GCTGGAGTTCCCGGAGGCGGGACAACAACAGTTCCTCGCCGCGGTCATCACCAGGCTCGA
TCCTCATGCCCCGGCGTTCAAACTCGCGCCCGTCTACACGCTCTATCTCTGCGCCAGATA
TCGTGCTTCAACTCATTACCGGCCCGAGCTGACGCCGACCGAGAGGGCCCACAAGCTGAC
CGCCTTCCTCCACCACGTCGCCACACTCATACACGCTACTGTACAGGAACGCGCTAGTGA
CTCTGCAGCTCAAGCGTTCTGGATGGCCAACGCCAGTGAACTGCTGCACTTCCTCAAATA
CGACAGACATATCTCCTCGTTCTCAACGCAAGCTCAAGAGTTACTAGCCATGACTGTACA
AAACGCGTTCAGTAATCTGGTGGCGTGCTTCGAGGAGAGTCTGGGTCGCGCCCTGGCGGC
TCTGACGAGCGGCAACAGCGCGGAGGCGACGGCCGCCACCGAGCCCGCGCTGCAGGCGCT
CGCCGCCGCCATGGTGCTGCTGCGCCGGTGCAGGGTCAACGCGGCGCTCACCATACAGCT
CTTCTCGCATCTCTTCCACTACATCAACGCCGTTTGTTTCAACAAGGTGGTGAGCGAGCC
GGGCTGTGTGAGCGCGGCCTACGGGCGCGCGCTGTCGGGGCGGTTGGCGCTAGTGGCGGC
ATGGGCCGAGCGGCAGGGACTCGAGCTAGCAGCCGACTGCCATCTGGCGCGAACGCACCA
GGCCGCCCGGCTGATACAGGGCGAGTATCGCACCGCAGAGGAAGTGCGGGCGGCGCTGTC
GGCGTGCTTCAAGCTGAACTCCGCGCAAGTCCGAGCGCTGCTCGCGCCCATCGCCGCGCC
CGAGGTCGTGGAGGCGGCCGTGCAGCACGCGCGGGCGCTCGCCGACGAGCTGTGCCGGGC
CGACGGACGAGAGATACGAGTCGAGGAGGGCGGTTGGCTGGGGGCCGGACTGCTGATCCC
CGGGGATGGGTTCAGCGCGGAGGTGGTCCGCGGCGTGCCCCCCGGGCTGGCGGAGTTCGT
GGCCCCCCTGCAGCGGGCGGGGCTGTGTCGGCTCGCCCACCAGCCGCACGCGGTCGGCGC
GTGGACCGTGTACATGGGCCGAGCGTCCCCGCGACCCCCGCCCGTCCCCGACCGACATAT
CCTGCAACTACATAAGAACGCTAACGGCATGGGACTCAGTATAGTCGCCGCAAAGGGTGC
AGGCCAAAGCAAATTGGGTATCTATATAAAGTCCGTAGTGCCGGGCGGCGCGGCGGCTGC
AGACGGGCGACTGGCGGCCGGCGACCAACTGCTATCCGTTGATGGACAGTCGCTCGTTGG
TATCACACAGGAAAAGGCGGCTGAATACTTAGTAAGGACGGGTCCGACCGTCACTTTAGA
AGTCGCGAAACAAGGAGCTATGTTGCACGGACTAGCCACTCTATTACACCAACCGGCCTA
CAACAATCAGCGACCAGCGGGCGGCGGCGCGTTGCGTCGTGCGTCGGAGCGCGACCTGCC
CGCGCGGCTGGCGGCGGAGGCCGTGAAGCCCAGCAAGAGCACGCCCGCCCTGCACCACGC
CGCACCCGTCCCGCACAGTAGTGTAACGAGCCCGAGCGTCCCGAGCGCCTCGCCGAGCGT
GTGGCCCAACAAGTCGCGGAGCAGCCACAACCTGTCCGCGACCTCGCACCACGACGGCTT
CTACCAGAACCTGCCCGCCGTCAGCTCGCAACAGTACCCACTACAAGACAGGTGGTCGTC
GCTACGCAGTTCCACTGGCAGCAACCGTCCTCAGTCGGCACATTTTTCAGCAGCAAACCC
GCAAGAACAGGCGCCTGATTCTCCCCTGCACCAGGCAAACCATGGAAGCACTATGAGTAT
ACGTGCAGCGAAGCTAGCTGAGATGTCAGAGGAAGTTACGCGTCGCCAACAGATGCAACA
ACAACATCAACTGCAACAGCAGCAACAACTACACCAGCAACAACAGCAACAAATACACCA
ACAGCAGCAACAACAGCAACATATTCAGCAGCAACAACTTATCCAACAACAACAATTACA
ACAGCATATTCAACAACAACAATCGCAGCTGCATCAGCAACAACAACAACATTTACATCA
GCAGCAACTACATCAACATCAAATGCAACAGAGGATGCCATCATTACCACATCATCATCC
GCAGATGAACAACCTTCATTCTCACGGACAACCACCACTGTCGCCGGGCTCGACGCAATC
TTTGCAGTTCCAACAGCAACCTTCCCCGCAGCCCCCGCACCCCCCGCAGCACGCTTACAG
CCAGCACGGTCAGCCACAGAGATATGAATGGCATCCGCCCGGTCCTCCGTCGCCGCAGAG
ATCGCAGCCGCCCGTAGCTCCCAAGCCACAAAATGTAAGAAGACCTGAAATGGAAATGGA
AGAGCCTTCACATCAACAGCCTCCGCAGATGATGAATATGCAACCGGATGAAGAGCGGCA
GTCCGGCAGCGCTCTGTACCCCGCAAGCCCCTGGCAGCGCGAGGAGCGGGAGCGGCAGGC
CGAGGTGCGCCGCGCGGCCGCCCGCGCCCGCAGGTACGCACGCCAACACGCACCTGCACT
ACGCACACAATATTGTCTACTATAGATAAGCGAAAAATCACTCACTCATCACGATATCTC
ACTTCCGTATCTTTATTCGTTCACTCGAGTTCAACTCGACTAGATTCAACCTCCAACGCG
CGTTTTGTTTGCTTGATCGTAAAAATAACCTCCACTCAAACGTCCCTCGAAAATTATCCT
CGCCGGAATGCAGTAAATGAACTGTCAAGTCAAG
(4534 bp)

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