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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69370_c0_seq1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_afadin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0008022 F protein C-terminus binding
GO:0017016 F small GTPase binding
GO:0030054 C cell junction
GO:0034332 P adherens junction organization
GO:0043547 P positive regulation of GTPase activity
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:0.55 TPM:0.95
ORF EntryO_BomoEE18383_complete:A_BomoEE_comp69370_c0_seq1
Sequence
(Nucleotide)
AGCTGTCATAACAGTAATATAAAAAGAATGAAATAATACAGACCAATCAACTTGGTACGA
CTTAACTTAAGCATTGGGTACAATTGCTTAAACTGAAATTTAAAACAAATCAATATTCAG
TTATAGAGATCAAAATCTTTAGTGAGGAAGATTTCACTAATGAACTATAACTGTAAGGGT
TATCTAAAAATCCAGTGAATAAATATAATATTATGTATAGTTTAATAAGAATTTTAACGT
AGACAACTTCGTATAGAAGAAAATTTACGACCAACGAATCAGATAGGAAGTTGAGGTATT
CTTAAACGTTTGCTCTGTGCTCTGTTGAGTTCAGTAATTCTGTGAGACTCCTCATGGGTC
GGACAATGCTCGCGGTGGTTCACAATGGGAATACACGGTCGGGAACGTGCGGGCGCAGGA
CGCGGCAGTCGCCTAACAGACGCCGCACTGCGCGCCCCTGTACCGCGCCTCCGGCATGGA
TTGGGGTATCCGCCGCTCTATCATGTTCCACGTGCGGCGGCGTCCGGCGGACTCACAGCC
ACGGCGACGGAAGAAGAAGGTCGGCACAGGCACCAACGGGCGTCCAGGCAACGAACCTTT
ACTTCTGGAGGTCGCGCCCGACGCCACGCCTCTAGAGAATGGACGCAGAATCCGGATTAC
CGATGTCGTCGAGGTTGGTTCGGGAAATGGCACCGCCCTGCAGCTGTACGGACCGTCGAT
ACAATCCCGGCATTGCGTGGTCGCTCCCGCTGACGGTGGCGGATACACCGTGACTCCGCT
ACACGCGGACGCGCAAGTCTTCGTCAACGGACAAAGGATCATGCACACACAGCGATTACA
GCACGGATGTCTGCTGAAATTCGGGCGCGTATCGACTTTCCGTTTCGTGGACCCCGCCCA
GGAGAACCTGATCAACAGGAACTTGGCTCAGTCGCAGTCAAACTACGGCTCCGGATCCAT
ATACGACAGGTCGCCCGCGTCACCGGAGCCGGGCGGCGCGATGTCCCAGCAACCGGACGC
GCTCGACAACAACGCCAACGACGAGTACCACCGCACCGTCAGCCCGGTCTCGAACGACCA
CTACTACAGAGACTCGAACGAGATCACGCCGTACAACAACAACAACACGCTCAAACTCGA
CAACGAGTCGCTGATGATGTCGCAGCACCTCACCGACTCGAAGGACGAACACACCGGATC
GATTTACAACGATCACGATCAGAGCACAAACGCGAACCGCACCGGGAACTCGCAATACAA
AGATAACTACGAAACCACGTTCGATTTAGACGGAAACGTTGAAACGAAAAGCATCTGTAG
CGCTAAAAGCGGAGGTTCAGGACACGAGAACAGGATGGGTGCTGGTCGAATCGGCCAAGA
AGCGATCCTGCCGGCCGTGCTGGAGTTCCCGGAGGCGGGACAACAACAGTTCCTCGCCGC
GGTCATCACCAGGCTCGATCCTCATGCCCCGGCGTTCAAACTCGCGCCCGTCTACACGCT
CTATCTCTGCGCCAGATATCGTGCTTCAACTCATTACCGGCCCGAGCTGACGCCGACCGA
GAGGGCCCACAAGCTGACCGCCTTCCTCCACCACGTCGCCACACTCATACACGCTACTGT
ACAGGAACGCGCTAGTGACTCTGCAGCTCAAGCGTTCTGGATGGCCAACGCCAGTGAACT
GCTGCACTTCCTCAAATACGACAGACATATCTCCTCGTTCTCAACGCAAGCTCAAGAGTT
ACTAGCCATGACTGTACAAAACGCGTTCAGTAATCTGGTGGCGTGCTTCGAGGAGAGTCT
GGGTCGCGCCCTGGCGGCTCTGACGAGCGGCAACAGCGCGGAGGCGACGGCCGCCACCGA
GCCCGCGCTGCAGGCGCTCGCCGCCGCCATGGTGCTGCTGCGCCGGTGCAGGGTCAACGC
GGCGCTCACCATACAGCTCTTCTCGCATCTCTTCCACTACATCAACGCCGTTTGTTTCAA
CAAGGTGGTGAGCGAGCCGGGCTGTGTGAGCGCGGCCTACGGGCGCGCGCTGTCGGGGCG
GTTGGCGCTAGTGGCGGCATGGGCCGAGCGGCAGGGACTCGAGCTAGCAGCCGACTGCCA
TCTGGCGCGAACGCACCAGGCCGCCCGGCTGATACAGGGCGAGTATCGCACCGCAGAGGA
AGTGCGGGCGGCGCTGTCGGCGTGCTTCAAGCTGAACTCCGCGCAAGTCCGAGCGCTGCT
CGCGCCCATCGCCGCGCCCGAGGTCGTGGAGGCGGCCGTGCAGCACGCGCGGGCGCTCGC
CGACGAGCTGTGCCGGGCCGACGGACGAGAGATACGAGTCGAGGAGGGCGGTTGGCTGGG
GGCCGGACTGCTGATCCCCGGGGATGGGTTCAGCGCGGAGGTGGTCCGCGGCGTGCCCCC
CGGGCTGGCGGAGTTCGTGGCCCCCCTGCAGCGGGCGGGGCTGTGTCGGCTCGCCCACCA
GCCGCACGCGGTCGGCGCGTGGACCGTGTACATGGGCCGAGCGTCCCCGCGACCCCCGCC
CGTCCCCGACCGACATATCCTGCAACTACATAAGAACGCTAACGGCATGGGACTCAGTAT
AGTCGCCGCAAAGGGTGCAGGCCAAAGCAAATTGGGTATCTATATAAAGTCCGTAGTGCC
GGGCGGCGCGGCGGCTGCAGACGGGCGACTGGCGGCCGGCGACCAACTGCTATCCGTTGA
TGGACAGTCGCTCGTTGGTATCACACAGGAAAAGGCGGCTGAATACTTAGTAAGGACGGG
TCCGACCGTCACTTTAGAAGTCGCGAAACAAGGAGCTATGTTGCACGGACTAGCCACTCT
ATTACACCAACCGGCCTACAACAATCAGCGACCAGCGGGCGGCGGCGCGTTGCGTCGTGC
GTCGGAGCGCGACCTGCCCGCGCGGCTGGCGGCGGAGGCCGTGAAGCCCAGCAAGAGCAC
GCCCGCCCTGCACCACGCCGCACCCGTCCCGCACAGTAGTGTAACGAGCCCGAGCGTCCC
GAGCGCCTCGCCGAGCGTGTGGCCCAACAAGTCGCGGAGCAGCCACAACCTGTCCGCGAC
CTCGCACCACGACGGCTTCTACCAGAACCTGCCCGCCGTCAGCTCGCAACAGTACCCACT
ACAAGACAGGTGGTCGTCGCTACGCAGTTCCACTGGCAGCAACCGTCCTCAGTCGGCACA
TTTTTCAGCAGCAAACCCGCAAGAACAGGCGCCTGATTCTCCCCTGCACCAGGCAAACCA
TGGAAGCACTATGAGTATACGTGCAGCGAAGCTAGCTGAGATGTCAGAGGAAGTTACGCG
TCGCCAACAGATGCAACAACAACATCAACTGCAACAGCAGCAACAACTACACCAGCAACA
ACAGCAACAAATACACCAACAGCAGCAACAACAGCAACATATTCAGCAGCAACAACTTAT
CCAACAACAACAATTACAACAGCATATTCAACAACAACAATCGCAGCTGCATCAGCAACA
ACAACAACATTTACATCAGCAGCAACTACATCAACATCAAATGCAACAGAGGATGCCATC
ATTACCACATCATCATCCGCAGATGAACAACCTTCATTCTCACGGACAACCACCACTGTC
GCCGGGCTCGACGCAATCTTTGCAGTTCCAACAGCAACCTTCCCCGCAGCCCCCGCACCC
CCCGCAGCACGCTTACAGCCAGCACGGTCAGCCACAGAGATATGAATGGCATCCGCCCGG
TCCTCCGTCGCCGCAGAGATCGCAGCCGCCCGTAGCTCCCAAGCCACAAAATGTAAGAAG
ACCTGAAATGGAAATGGAAGAGCCTTCACATCAACAGCCTCCGCAGATGATGAATATGCA
ACCGGATGAAGAGCGGCAGTCCGGCAGCGCTCTGTACCCCGCAAGCCCCTGGCAGCGCGA
GGAGCGGGAGCGGCAGGCCGAGGTGCGCCGCGCGGCCGCCCGCGCCCGCAGGTACGCACG
CCAACACGCACCTGCACTACGCACACAATATTGTCTACTATAGATAAGCGAAAAATCACT
CACTCATCACGATATCTCACTTCCGTATCTTTATTCGTTCACTCGAGTTCAACTCGACTA
GATTCAACCTCCAACGCGCGTTTTGTTTGCTTGATCGTAAAAATAACCTCCACTCAAACG
TCCCTCGAAAATTATCCTCGCCGGAATGCAGTAAATGAACTGTCAAGTCAAG
(4192 bp)

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