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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69341_c1_seq2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_protein_sel-1_homolog_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0034976 P response to endoplasmic reticulum stress
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
Transcript
Level		FPKM:7.24 TPM:12.64
ORF EntryO_BomoEE18300_complete:A_BomoEE_comp69341_c1_seq2
Sequence
(Nucleotide)
GTTTCACTTTCCTGCGCTGGTGAATTTTTACAAATAATAAACGGCGTATTATCATGATCA
ATGGGTTATAGGAGTCCACTTTCATTAATTATATACAACCTGTCTTAAAATTCGACGATA
AGCTGGCACTAAAGAGAGGCTTCATGAAAAAAAAACTCGAAACTTCCTTCAAAAATTAAC
ACTCATAATTTAATATTTAATAACATAATCGCAATGTTTATCGCCAGCTTAAGTACCACT
ACTAAATAAAGAAAATGGGCTTAATTCCCTATGCCTATTCAATTCAAATACGAAACAAAT
AATAATTACTTTTTTGCTGACAGTTACTACATTTGACGTTGATAGAAATCAGTCCTTTAA
ATTTATTTTAGAGAAGAGTTGAGAATATAGACTTGCATGTAAATTATTGATAAATTAATT
GGCCTTTTACTTTAAATATACACGTGTAAATCTATAAGTGGTCACGGAAACATTCCTTTT
ATTCGCCGGTTAACGTTAAAACAAAACATAAACAAGTGCTTGGGACACGTAAGTGCTGTG
AGTGTTGTTATTATTTATTCGAACCGAAAATATGGACCGCTACAAACTATTAGTGCTTGT
TCTGTGTTTTTCGTTGACGACTACCGATCCCGTTGGACCCGAATCACGAAAGGACTCCGA
GAAAAACGAAGAAGATGATGTCTCGAGTGAAGTTGAAGAAACGAAAGGGAAACCCGATTC
AGAGTACATCAAAGAACTGACTGATGCTATGAATAAAGAGATACTGACGTTACAGGAGTA
TGCTGATGCTATGAAGAGTCAGTCGTCAAAAGATGAAACCAATAAAGAATCACACTTAGA
ACAAATGGCATATACTTTAAAGCTTTTACAGAAAAGTCTTAAGAAGCACTCTGAACCAAC
TTGGCTTCCTAACCAAAAAGCAGAACTGTCTGTAAATGAGAAATCACTAGAGGAGAATCC
ACAGGATATTCTGAACAGTCTACCACCATTACCAGAAGAGACAGAACCAGAATTAACTCC
CGAATTAAAAGAAGCCAAAGAATTGTATGATGCTGCAGTAGCAAAACTAGATCGTCGAAC
TTTGGATGTCGATGCTTCCATCCTTCAGATCAAGCAGGCAGCCGAAGTCGGATATGTGCC
GGCTAAGATCAAGCTAGCCTGGTCATATCTCTATGGGGAGGGGGTCGAAATAGATTTCGA
AAAAGCTAAGAGCATATTTGAAGAGTTGGCAGCCGAAGGGAATGCTGATGCCCATGCGGG
CATGGGCTTCTTATACGCAACAGGCATCGGAGTTCCAGTGTCGCAGGCAAAAGCCGTGGT
GCATTACACTATTGGTGCGATAGGTGATAGCTCGTACGCACAGATGGCGCTGGCGTATCG
ATACTGGAGCGGTCACACGGTGCAGAGCTCATGTCCGAAAGCAATGGATCTATACATGAA
GGTGGCTGCCAAAGTGGCAAGTAAAATGACATTGAACGGAGGCCCGGCCATACATCGCAC
GCGGCTCATCGACGAGGTGGAGGGCGGCGGCGGAGCCCTAGACACGGATCTCATCGAGTA
CTACCAGCTCCTCGCCGAGAAGGGTGATGTACAAGCACAGGTGGGTCTGGGGCAGTTACA
CTTCCAAGGAGGTCGCGGCGTGACCCTGGACATCAACAAAGCGTATCACTACTTCCAACA
GGCGGCCAAGACGGGAAATGCTGTGGCGCACGCTTTCCTTGGAAAGATTTATTTAGAAGG
CGGAGACGGCATAGTGGCAGACAACGACACGGCATTCAAGTACTTCAAGAAGGCGGCTGA
ACTGAACAACCCTGTGGGCCAAAGCGGACTAGGGTTGATGTATTTACAGGGCCGCGGCGT
TCCCAAGGACACGACGGCCGCGTTCAAGTACTTCACGATGGCCGCCAACCAGGGCTGGGT
CGAGGGGCAGTTCCATCTGGGCTTCATGTACTTCGGGGGCATCGGCGTGCGGCGCGACTT
CAAGCAGGCCAACAAGTACTTCTCGCACGCGTCGCAGTCCGGCCACGTGCTGGCGCTGCA
CCAGCTCGCGCTCATGCACGCTCACGGGCTCGGCGTGCTCAAGTCCTGCACCACGGCCGT
AGAGCTGCTGAAGAGCGTGTGCGAGCGCGGGCGGTGGGGCGCGCGGCTGCAGGCGGCGCA
CGGCGCGTGGCGCGCGCACTCCCCGCACCGCGCCTTCCTGCAGTACGCCGCGCTGGCCGA
GCGGGGCTACGAGGTCGCGCAGACCAACGCCGCCTACCTGCTCGACAACGGCGACGTCCG
GCTGTTCCCGGAGGCGGAGCGCCACGTCCGCGCGCTGCAGCTGTGGGGCCGCGCCGCCAC
GCAGGGCTGCAGCGCCGCCAGGGTTAAGCTCGGGGACTACCATTACTACGGGCTCGGGAC
CCCACAGGATCTGGAGGCGGCCGCTCATCATTACAGGGTAGCATCAGAGCAGCTGCACAA
CGCGCAGGCGACCTTCAACCTGGGCTACATGCACGAGCGCGGCCTGGGACTAGCCAAGGA
CGCGCACCTCGCCAAGCGGTGCTACGACCTCGCCGCCGACACCGCGCCCGACGCCCGCCT
CCCCGCCGCCCTCGCCCTCGCCGCCCTGCACACGCGCCTCGCGCTGCAGGACCTCGCCGC
TAGTCCACTCGCGATGATCTTCATAACCGGAGACGAGTCCGCTCTCCTGTACAACTGGGA
CCTGTACGTGATCACCACACTGCTCGGGATGCTGGGAGTGGTCATGTACATGAGGAGACC
ACAGCAGCAACAGCAACAGCAGCAGGCCGCGAATTAAATCGATTCCATCAGTGAAATCGT
CATGAGAATTGTGTTCGATTATACTACCAATCTTTAATACACCACAAACTTTATTTCATT
CGTTTTTTTTACTTAATGGTAATAAAAAATATTTTTGTTTTCACTAATGGCAATAAAAAT
GAAAATAAACACAAATCATATCTCGTCATCATAGACGGTAAATACTTTGTTGAGATCGTG
CGAATAATCGATTTGTATAAAATATCGATAAACATCGATTAAATGTCGAACAGACCGCAC
TAGTACAATTTTTAAATACCAATCGTTGACTCCATTTATTTATTTTTCTATAGAAAACTG
TGAAAATCGATTTGCAATTTATAAAGTTTCTATTGGTTTGTTTAGTAGTTGTCTTATTCT
TTGTTAAACCGATAATTTTTGTTTTGTTTATTGTAATCATAAAATTACATCTCACACGAA
TGATTTTTTGATTGATTGACGAATTTTTTTTTTTGTAGCGGTATTTTTGTGTTATTACGT
TGTTAAAATCAATTCAGTAATATTATAATGTGCCGTAAGTATTAAGTATGTCTGCTCGCC
CACCATACAACCATAAGGCGCTTTTCTTAAATGGTTCTGTAAAATGTAAAAATACTGGTT
GTTTTTTTTTTTTTTTTTTCAA
(3442 bp)

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