SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69341_c1_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_protein_sel-1_homolog_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
Transcript
Level		FPKM:0.66 TPM:1.15
ORF EntryO_BomoEE18296_complete:A_BomoEE_comp69341_c1_seq1
Sequence
(Nucleotide)
GTTTCACTTTCCTGCGCTGGTGAATTTTTACAAATAATAAACGGCGTATTATCATGATCA
ATGGGTTATAGGAGTCCACTTTCATTAATTATATACAACCTGTCTTAAAATTCGACGATA
AGCTGGCACTAAAGAGAGGCTTCATGAAAAAAAAACTCGAAACTTCCTTCAAAAATTAAC
ACTCATAATTTAATATTTAATAACATAATCGCAATGTTTATCGCCAGCTTAAGTACCACT
ACTAAATAAAGAAAATGGGCTTAATTCCCTATGCCTATTCAATTCAAATACGAAACAAAT
AATAATTACTTTTTTGCTGACAGTTACTACATTTGACGTTGATAGAAATCAGTCCTTTAA
ATTTATTTTAGAGAAGAGTTGAGAATATAGACTTGCATGTAAATTATTGATAAATTAATT
GGCCTTTTACTTTAAATATACACGTGTAAATCTATAAGTGGTCACGGAAACATTCCTTTT
ATTCGCCGGTTAACGTTAAAACAAAACATAAACAAGTGCTTGGGACACGTAAGTGCTGTG
AGTGTTGTTATTATTTATTCGAACCGAAAATATGGACCGCTACAAACTATTAGTGCTTGT
TCTGTGTTTTTCGTTGACGACTACCGATCCCGTTGGACCCGAATCACGAAAGGACTCCGA
GAAAAACGAAGAAGATGATGTCTCGAGTGAAGTTGAAGAAACGAAAGGGAAACCCGATTC
AGAGTACATCAAAGAACTGACTGATGCTATGAATAAAGAGATACTGACGTTACAGGAGTA
TGCTGATGCTATGAAGAGTCAGTCGTCAAAAGATGAAACCAATAAAGAATCACACTTAGA
ACAAATGGCATATACTTTAAAGCTTTTACAGAAAAGTCTTAAGAAGCACTCTGAACCAAC
TTGGCTTCCTAACCAAAAAGCAGAACTGTCTGTAAATGAGAAATCACTAGAGGAGAATCC
ACAGGATATTCTGAACAGTCTACCACCATTACCAGAAGAGACAGAACCAGAATTAACTCC
CGAATTAAAAGAAGCCAAAGAATTGTATGATGCTGCAGTAGCAAAACTAGATCGTCGAAC
TTTGGATGTCGATGCTTCCATCCTTCAGATCAAGCAGGCAGCCGAAGTCGGATATGTGCC
GGCTAAGATCAAGCTAGCCTGGTCATATCTCTATGGGGAGGGGGTCGAAATAGATTTCGA
AAAAGCTAAGAGCATATTTGAAGAGTTGGCAGCCGAAGGGAATGCTGATGCCCATGCGGG
CATGGGCTTCTTATACGCAACAGGCATCGGAGTTCCAGTGTCGCAGGCAAAAGCCGTGGT
GCATTACACTATTGGTGCGATAGGTGATAGCTCGTACGCACAGATGGCGCTGGCGTATCG
ATACTGGAGCGGTCACACGGTGCAGAGCTCATGTCCGAAAGCAATGGATCTATACATGAA
GGTGGCTGCCAAAGTGGCAAGTAAAATGACATTGAACGGAGGCCCGGCCATACATCGCAC
GCGGCTCATCGACGAGGTGGAGGGCGGCGGCGGAGCCCTAGACACGGATCTCATCGAGTA
CTACCAGCTCCTCGCCGAGAAGGGTGATGTACAAGCACAGGTGGGTCTGGGGCAGTTACA
CTTCCAAGGAGGTCGCGGCGTGACCCTGGACATCAACAAAGCGTATCACTACTTCCAACA
GGCGGCCAAGACGGGAAATGCTGTGGCGCACGCTTTCCTTGGAAAGATTTATTTAGAAGG
CGGAGACGGCATAGTGGCAGACAACGACACGGCATTCAAGTACTTCAAGAAGGCGGCTGA
ACTGAACAACCCTGTGGGCCAAAGCGGACTAGGGTTGATGTATTTACAGGGCCGCGGCGT
TCCCAAGGACACGACGGCCGCGTTCAAGTACTTCACGATGGCCGCCAACCAGGGCTGGGT
CGAGGGGCAGTTCCATCTGGGCTTCATGTACTTCGGGGGCATCGGCGTGCGGCGCGACTT
CAAGCAGGCCAACAAGTACTTCTCGCACGCGTCGCAGTCCGGCCACGTGCTGGCGCTGCA
CCAGCTCGCGCTCATGCACGCTCACGGGCTCGGCGTGCTCAAGTCCTGCACCACGGCCGT
AGAGCTGCTGAAGAGCGTGTGCGAGCGCGGGCGGTGGGGCGCGCGGCTGCAGGCGGCGCA
CGGCGCGTGGCGCGCGCACTCCCCGCACCGCGCCTTCCTGCAGTACGCCGCGCTGGCCGA
GCGGGGCTACGAGGTCGCGCAGACCAACGCCGCCTACCTGCTCGACAACGGCGACGTCCG
GCTGTTCCCGGAGGCGGAGCGCCACGTCCGCGCGCTGCAGCTGTGGGGCCGCGCCGCCAC
GCAGGGCTGCAGCGCCGCCAGGGTTAAGCTCGGGGACTACCATTACTACGGGCTCGGGAC
CCCACAGGATCTGGAGGCGGCCGCTCATCATTACAGGGTAGCATCAGAGCAGCTGCACAA
CGCGCAGGCGACCTTCAACCTGGGCTACATGCACGAGCGCGGCCTGGGACTAGCCAAGGA
CGCGCACCTCGCCAAGCGGTGCTACGACCTCGCCGCCGACACCGCGCCCGACGCCCGCCT
CCCCGCCGCCCTCGCCCTCGCCGCCCTGCACACGCGCCTCGCGCTGCAGGACCTCGCCGC
TTACATATTGCAGAGTCCACTCGCGATGATCTTCATAACCGGAGACGAGTCCGCTCTCCT
GTACAACTGGGACCTGTACGTGATCACCACACTGCTCGGGATGCTGGGAGTGGTCATGTA
CATGAGGAGACCACAGCAGCAACAGCAACAGCAGCAGGCCGCGAATTAAATCGATTCCAT
CAGTGAAATCGTCATGAGAATTGTGTTCGATTATACTACCAATCTTTAATACACCACAAA
CTTTATTTCATTCGTTTTTTTTACTTAATGGTAATAAAAAATATTTTTGTTTTCACTAAT
GGCAATAAAAATGAAAATAAACACAAATCATATCTCGTCATCATAGACGGTAAATACTTT
GTTGAGATCGTGCGAATAATCGATTTGTATAAAATATCGATAAACATCGATTAAATGTCG
AACAGACCGCACTAGTACAATTTTTAAATACCAATCGTTGACTCCATTTATTTATTTTTC
TATAGAAAACTGTGAAAATCGATTTGCAATTTATAAAGTTTCTATTGGTTTGTTTAGTAG
TTGTCTTATTCTTTGTTAAACCGATAATTTTTGTTTTGTTTATTGTAATCATAAAATTAC
ATCTCACACGAATGATTTTTTGATTGATTGACGAATTTTTTTTTTTGTAGCGGTATTTTT
GTGTTATTACGTTGTTAAAATCAATTCAGTAATATTATAATGTGCCGTAAGTATTAAGTA
TGTCTGCTCGCCCACCATACAACCATAAGGCGCTTTTCTTAAATGGTTCTGTAAAATGTA
AAAATACTGGTTGTTTTTTTTTTTTTTTTTTCAA
(3454 bp)

- SilkBase 1999-2023 -