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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69313_c0_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_ras-responsive_element-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0010634 P positive regulation of epithelial cell migration
GO:0016607 C nuclear speck
GO:0033601 P positive regulation of mammary gland epithelial cell proliferation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1903691 P positive regulation of wound healing, spreading of epidermal cells
GO:2000394 P positive regulation of lamellipodium morphogenesis
Transcript
Level		FPKM:7.15 TPM:12.48
ORF EntryO_BomoEE18249_5prime_partial:A_BomoEE_comp69313_c0_seq2
Sequence
(Nucleotide)
CTCGTCAGGACGAACGAAACGACGGGCGCTAGCTATCTCGCTTGCTCACCTCGGGAGCGA
GATGCGCTCTCTCGTTCAGTCCGCGCGCTCGGCCGCCGTGCCACTCTCGACCAATCACCG
GCCATCTTCTGCTCCCCCGAGAGCAGAGCGACAGTGCGTGCTCTCATCACAATCACAAGG
AGACGGCATCTCGCCGTGCGAGGTTGTCGTCAGCTCGAGATGCGTTCACTCACGAGCGCA
CGCTTTTACATATTACACAAAAATTGTGCATTCAGTGTTGAATAAGACTGTTGAATTGTG
TTCAAAAAATAAATTCAAGTGATCTGTGAGAGACTAGATAGTGAGATCGGACTATTAAAA
TTTCTGGCATACAGAGACTGATATCGCGAAAATAATCCACCATTGGGCGCCGTCGAGGAC
TTCCATCCCGGGCGATGCAGGGTGCAGCCAACGCACCCGCGCCCCCCGCGGCTGAACCAC
CGTCTTCGCAACAAATCAAAACAGAGGACATCAGCGAGGCTAAAATCGAAGCCGACGAGG
AAATGGATAAAGTGAAAATTGAACAACAGGAAATGAGGAATCGTACGACTAGTATTGACA
GCGACAACCGTTCGGATAGGAGCGACGATGAGGACGTCAGAAGGGCGCGAAAGCGGGCCG
CGTCCACTTCTCCTTCCCCCATCCCGATGGACAAGAGGGTCGCTCGCTTCGACTGCCCGA
AGTGCCGCCAGCGTTTCGATTCGGTCAACGCTTTCGACATTCACCGGTTCACAGCGCACG
GAGATGATTCGAGAACGGGCCACAACGAGGTCAGTCTCGTCGACTACTCGACAAAGAAGA
TTCCAGAAATTATACGTGCCAGGAACCACGTCTCATCGACCGAACAACGATACAAATGTG
ACGTGTGCTCGAGGGATCTCCCCAATATTCAAGTATTTGAGATTCACAGGAAAACATGCA
CACCGAATCGTGGCTTGAGTCCGATACGCGACAGACGAGAAGAATTCTTGGCTAATCTAG
ATCTGCGGACCAAATCGTTCGGGATTCCGGGCACGTTGACGCCGCCGATGGAGAGATTTA
CATCGAAGTTCGAAGACGGGCATCTCGCGACTAACGGTATTAGACATATCGATGCAGCTC
GAGATTTGGCAGATATTCAATCGATATTGAACGTCACGTCTGCGGGGAGTCTTCTCGAGA
GACTCACTGGTAACAGAGTAGCTTTAGAGAGCACTGTACTTACGCCTCCAGACACCGTCG
TTAAAGAACGAGAGACTGAAGAGACACAGGATAACTTTGCCGCTGAATTCAGGAGGATGA
AGCTTCGGGGAGAGTTCCCTTGTCGCTTGTGTCCAGCTAAATTTCCCAATCTTAGAGCTT
TAAAGGGCCATAACAGAGTCCACTTAAGTGGAACAGGACCGGGCCCTTATCAGTGCAACA
TGTGTCCACACGCATCTTTAGATAAGGCGGCTCTAGTGAGACATATGAGGACACATAACG
GTGATCGTCCATATGAGTGTGCGGTGTGTAATTACGCGTTCACTACGAAAGCAAACTGCG
AGAGACATTTAAGAAACAGACACGCCAAAGTAACCCGTGAAGATGTAAAACGCTCCATCA
TTTACCATCCGTCCGAAGATCCGAATAACGACGAAGTCAACTCGAAGCTCGCACGCGATG
AAGTCAAGAGATCTCTCGCGTTCCACACCCCAGATATGGATAGGCGAAATGAGAGCACCG
GTCGCGTGACTCCGCTAACTCATTTTACGCCTAGTTTCATTGCCGAAAGACATCCGGTCA
CAACACTTACATCGAAAGCTTTACCGGAAGCGCCGCTTTTGCGCGAATCAGACCGTCCCA
CGCCAAGGATCAAAGTGAAAGGAATCGGTCAGTTAAATCAAATCCCTGAATTCAGATCAC
CAGAACAAAATTACAAAACCAATGACGCTCATTCCGAAACGTATGATGAAGAGGTCCCTG
TTGACCTAAGCACGAGTGATAATAACAGTTGCGATGTCCTTGATCTTAGCAAAAAGAAAC
GCGATGCCGACGATGAACGCAAAACCCCTGTACGCCCTACATTCGAACCAGATCCTGCGT
CCGTTGCTGCTTCGGCATTAGAAAAAACGAGACTACTCTTAGCCCAGCAAAGATTATTTG
AAACGTCGCTCCCAAAAATTGACCCAGCTTACTATGCTACTCATCTATCTCAAATATACG
CTGGTGCGGTGCCAGGAATTCCTGGGCTACCTCTGCCCCCGTCTTTTCCTTACTTTCTTC
AACCCTCGTTTTTCCCCCACCCCTCTGACACACAAGAACTTGCAGAGATAAAGCAACGTA
TTCAAAAAGAAATCATCCGTGGGCTGAGTATGTCCGGTGGAAGGCTTATTCCAAATGAAC
AAGAAACTGTTCCTAAAGAAGAACCCGAGGAAGAAGAAGTGAAGCCAATTCCACAAATGT
CATCGCCTGCGCTGTCGCCTCACCCAGAATCTCCCCGACCCCTGAGCAATAACCTCGTCC
CTCAGACAGACTCCGTAAAGATGGTCATTAAAAATGGGGTGCTTATGCCAAAACAGAAAC
AAAGACGCTATCGTACAGAAAGACCATTTTCTTGCTCACAGTGCTCTGCTAGATTCACGT
TGAGATCTAACATGGAAAGGCATGTAAAACAACAGCATCCCCAACACTGGAGTGTCCGTA
GACCCGCTCAAAGAGGCCCCCCACCTTACACCTCTACGGACGCTTTGGCCGATCGCGTTA
AATTCGCCCTTTTGGCTCATCACCTTGAACGACCACTGCAGTCAGAGAGATCGCCGGCGC
GACGAGACTCTGATGAAGTCGCCGATAATGAAGAAGATGAGGACGACGCCCTAATAATTG
ACGAGGAAACGGATGTGGAAACCAAGTCCGAAGAACATACTGCAGCCCGACAAGCAGCTG
CCGAAATACTGATGGCTTCGCGACAACAAGAGATCAATAAAGACTTTGATCTTAAAATAG
CAGGCAATTTAATTAATAAACCAGTTCCCATAGCAGAGAAAACAGAATCTGGACCCGACC
CTACACCAGGACAAGATTTGCTGACCGTTCCAGTTGTACCCACACGCAGTGACGAGGAAG
AAGACGAAGAAGGCCTGGTAGCTTCAACAAGCGAGGGAAATAACTCGGGCAGCGACGAAA
ATAAATCTGAATCTGATGTCGCACAACCACCGAAAAAGAAATCGGCGTACAGTCTCGCAC
CGAATAGGGTCTCGTGCCCTTACTGCCATAGAAAGTTCCCGTGGTCTTCGTCCCTCCGCC
GTCACGTCCTCACTCACACGGGCCAGAAGCCGTTCAAGTGTCCCCACTGCCCTCTACTTT
TCACTACCAAATCGAATTGTGACCGTCATCTGCTAAGAAAACATGGGGGGTCAGCGCGTG
CCATACTCGCCGAGCCCATACCGGACACCGTGATGGCTCCCCAGCCCGCGAATGAGAACA
GGAGTGTTCCAGAGAGGCCTTTCAAATGTGCATCATGCCCAACCAGCACGTTCTCCTCTA
TAGAAACTTTAAAGAAGCACATGTCCTCTCGGCACGGGACCGACTCGCGGCCGAGCTCGC
CAAACCTGGAGATTATTGACGACAACTCTGAGATGGGCCTCGCTTTCAAGTGTCATTTGT
GCGAGGCGTCCTTCGGCGACAGAAGCGGGGCCCTCGCGCATTTGGCAGCCACACATGCGA
CTGAATACGAACAGCTGGTGAATAAGGGGGCGTTGGATGCGGCCAGCGACAGGAGTGAAA
GCGCTGACGATGACGACAGGGGCAAGTTTCCCGATCACGCTAATCGAAAGGTGGTCTGCG
CGTTTTGCGTCCGCCGGTTCTGGTCCGCTGAGGACCTGCGTCGCCACATGAGGACGCACT
CCGGCGAGAGGCCGTTCGCTTGTGACCTCTGCTGCAGAAGGTTCACCCTGAAGCACAGCA
TGCTCCGTCACCGCAAGAAGCACAGGGAGGACCACACTGATGACGAAGAGACTTCGCCTC
CGAACACCCCAATCGACAACGAAGCCAACGGGTATCTGTACCGGGAGGACGCCGGATCCG
GACCGGAGACCCCGAGCAACGTGAACAACAACAACTCGCCGCCCTCCGGCCCCTACGAGA
AGAAACTAAAACTCGACATGGTATCGAGGAAGTACTCATCGGAGGCCGAAATCGAAGGCG
AAAACGGAAGCGACCTCATCGGGAAGCTACTGGGAATCCCCGACAAGACCATCAACAAAC
TGCTCTCATCGGCCGACGAGGCAGCAAAAATACTCGGAGTCAACAAATGAGAGTACGCTT
TAGTCCTCGTGGCTCCAGCCAGGCTCGTCCTGGCGCCGCGAGGACTAGCACTCCCGGTAC
AACTTCGAGCGCAACGCTAAATCGATGCGACGCCATCTATCAACGAGTAGCGGAACTATT
CGCTTTGTAAATACGCTTTCGGTGCCTTCAGCTGCCTTATTCAAAATCCGAATGCCGTCC
GGTAGTGTCTTATTGTTAGATTTGGGTGAAAAAACAAACGAAGATTTAATGTTTAGTGCC
AGTTACAAGTACATTTTTTAGTGTATGACTATTGTAGTTGTAAGTTTTACTCACGTATTG
TATTTAGTGTTAGCCAGTTTTGTGAGCACACATATCTTTTGTAACGAGCATTTCCATCTA
GTCGCGGCACGTATAGAACGTAGTTCACCATTACCTTTTCAATTTTTACATTTAAAAAAA
AATATAGCTCAACTTCTATTTTCTGTGGTCATGAAATGGTGAAATTCGTTTTCAAACTCA
CCGGCACATGTAGTATAAAACAAACAGCCAAATAAACCTTTTTTTTTTGTTTTCGCAAAT
CCAAAATTGTCTAGTCAATATTGAAACGATTAAACTAAGCTAATATACCAAAATAAGGAT
TAGACTTTTTTTACATTCATAGTATCCGGTCGGTCTTGTGTGACCAGCCTTCAACCAATG
ATAGCACTAAGTTTCGATTTAGGAAATTAAGCATAATCTTTTCGTATCTTTCTTAAAGCC
TTTTTTGCACTATCTTTTTTTATTTCAACTCTATTAGTTCGTTCGTAAACTCAAAAAATT
ATTTTGCTCAAATCCATGGCATTTCTATTGACAAAGACTATTAATATAAATATGTTTTAA
TGTGTGTAAAGACTAAGATCTCTTTAAAATAAGTGTACATTTTTATTTTTTTTATTTTTT
TAAACGAATGAGTATCCTCGGTGGACTAACGTTTACCAAAACGGGAAAGATTAGTTTAAA
GTATTTTTTTTTTACTTTTATTTACGAATTAAAGAGTTTTATTTAGATTTTATTTTTTTA
ATGGTGCAACATTTCGTTTATGGGTTTAAAACTCTTTAGGGTAGCTTTAGTATAGTCTCC
CTGTAATATGGGAAAGAGATCATACGCTAGAATATACCTAAGTCCGAACATGCTTTGTAT
ATTATGAGAATGCTAAATATATATTATACCAAATATAAAAAAAAATATTTAGCCGTGTTA
AATATAAGATAGCATTAGTAATAACAATAAGCAATATAGGATTACGTTATTTGACAACGA
AATAATTCTTTACAATTAGAATTTTAGTAGCTACTAATATTAGTCGAAATAAAAAAAATC
TATGGCTATTAGAAAAAACGATTTTCTGTATTGATTAATAATTTTTGTATTGTGATTTTT
TTGTTTATATATATTCTAAGCACCTGTTTCGTACTAATAGTAATGTTAATAGTAATTGTT
AATTAAGTTTTTCAAATGTGTATTTCTATTTCCTTGACACTTTTAGTCCAATGCTTGAAT
ACTTAAAAAAAAAATCTTCTCATGCACGTAGCGACTGAGTGAGACAAACTATTATTATAT
TTTATAGACATACTATATAATAATATAACACTTAGTGTTTTCTTCCTGTTCTATTTTCAA
TTATTGTAATTAAGTGCGAGCAGGACAGAGCTTAGTAAATACTGAGTAAAGTTTAGATCT
CGGTTCTAATTTCTAAATATAAATAAAGTATACCAAAGTAAGTTTAGTTATCGATTATCA
ATTTTGATTCCTGCTTCATGTCAATTATAGTTAATGAAATATGATTATTATGAAATCGTA
TTAAATTAATATGTAGTGGTAATTGCTAGCGATTATTAATATTTTATGTGCACGGACCTT
AATATAGATGTGAAGTTGATGATATCTTTTGAGATGAATAGTAGAAGTGTGTGTGAATTT
TAAAAATTTATTAATTATTACCATATTATCTTAACTAGAATATTATTGTTGATATAATCT
CGTACTTAAATCGAAACATTAATATATAAGGAATTTAGTGTTAAGTATTTTGGCAACACC
GCTTGGCCTTTCAAATGTAGTAGTGTGTGTGTGTTTAAAAATATTACTAGAATTTTAAGA
TTTTAATACAATATATTTAAAATGTCATTTTTTTTTTTTTTCAAATCTTTCAATGTGTCC
TTGATAATTCACATTATGCCTCTCTTACTAAATGCAATGTAAGTGTCGTTTTAAAAACGT
TTTCTTTCTTGTGACAAATAAATAAATATTGTGTATTAAATAGAAAAAAAAAA
(6593 bp)

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