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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69248_c0_seq5
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_nuclear_RNA_export_factor_1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:0.94 TPM:1.64
ORF EntryO_BomoEE18093_complete:A_BomoEE_comp69248_c0_seq5
Sequence
(Nucleotide)
TTTTTTTTTTTTTAATTTTAATAGATTTATTCGTATAAATCCCTGCATTTCTTAACGTAT
TCTTATATCGTAGCCCTATGCTTTCCCCCCACAGCGCACGAGAAGGCAGCGCGTTCGCAA
ACAAAACACGACCAAGCGTCAAACGTCTTCGATCTAAACATAACATTCATTCGACCACAC
GACTAGCCCACAAAATAATTTATTAAGGGGTTCCGTCGTAATCGCATTGAACCGTGTCCA
TTGCTTCACGCACTCTGGACTATTTGCTGGCTTTGCAAGAAAAACAAGCAATGTAATCGA
CGCGACAGCCTGCCGGTTTGTGCAAAAAAATCGTTAACCGCCACGAAGCGCCATTATAAT
TTGGTAGCCCCCCAAATCTAAATTTAAATGTATATACAAGATTCGAGTTTCGAATATCTG
TTCTTTTTTCTTTTCTTTTTTTCACATTATTTTTAATGAATTAAATTTAAAATTCACAAC
AATTTATACACTGATGAACAACTATTTACGTAATATGTACATCGGAACCAAAGCTAACAC
TAACAAACTTAAAAATATCTAATTAGTATAAGCAACAAGTATCATGGTGATATTAAATGT
ATTTATTACAAATTAAAGTCAACGCCATAAGATTAGATGTTTTTTTAGCTCAAGTTAAGA
GCTGGTAAAAATGGTACATCAGTTCCGTCTCTCATGCTATCAAAGATATCAGAATTAACT
TACAAACAGCCAATCGGTGGCACACTATGTTCTTTTTCAATCCAAACTTTAGCATTTTAA
TTGAAAACTTATACAAACTTCGTCTTTAGTAACATTCTTAGAACAACATATTCTTTTAAT
TTTATTTTAATATTCATTGAATACAAATGTATTTTAGAATGACATTAATATACAGAATAC
TACAAAATGTTTAGTGTTTTAAACTTACACATGTTTTATTTAGACATGTTCAATATTAGG
CATTTAGACAAGTCTTATTTTGTTCAAACTCCAATTTGATTAGTATATTAATTTTGCACT
TTATGAGAGTATTATAACATACAATTGCATTAGATTGCCTCTTTTATTTAAGCCCATATA
CGAAGAGAGCAAATTTAATTTCTTTAGTAAACACTTAGGGTTCATTTCACAATTTCATTT
TATTCAAATACAGTATGTGTTTACGAGCGTGACGTTAATGAACCTTAAGGCTTTTTTCAT
GGCTACGATTCGTGAAAGCATCATACAAACTCACTGATCTCTTATTACTTGGGCAGTTAT
ACTTGGCAAGAGAGAACAAGGCACGGTAATAACAATAACGTGTGCGCTCAAAGAATACTG
CGCAATGGAGGACTATGCTTTCAGATTTAACAAGTCAACTATTGCACACGCCACTTAGCA
GTGTTTGCTTGAATACAATTCTGCATAAATTCAGACGGTAAACGCACAGGTAATACGAAG
TATTTAATTACAGCAAGAAAACACAGTTGTCCCAATGTAGATGGAACATAAGGTAACTGA
TGAGAGTTAACACGATTTTACATATAATGCATTTATAGTGGTACAATAGGAGCAATGTAT
GTAAAAATATTTCAATGGTGTATTCAAAAAAGTAAGATCGCGTAAATTCTCTTTACAATA
TAAAAATGTAATCACGAAATCGGATCCATAAAATCGAATTCGATTGTAAATAAAACAACA
GTTCTCTTTCAACCCTGCTTCGCGTAAGACTATTTGTGAAGCGATATTTTCGATTTTATG
GTTCTAATATCGAGATCATGTTCATTCGTTTTTAATTTTTGTATTTGACAGAAGTATATA
TACTTCTATGATATGTATATACTTTTGTGATAAATAAAAAATAAAAAAACCTAATTAATG
AATCGTAGACACCAATATCTACTCAGAAATTGTTGTAATTCTTGTCTAATCCAAACCACC
ATAAAACATAAATTTTAGATTGGATGCCATGGAGGGGCAAACATTTTGCAGATGATAAAT
AATTTGGTACTATAATTTCTACAGTAATTTGTTTCAGCATAAATTTCAACTATTACAGAA
AAAAACTTATTTAAAACTTATTTTGGTAATAGATAACTCTTCGGTTTTGTATTGTTTCCA
TCTTTTAAAAGCATTCTTGACTTTCTTCTGTAAACCATTATTTTCTTATTCTTCTAAAAA
GTTTGTACACAAACATGTACTTCCTTAAAGTAATTCTCTTCACATAAACTGCATATCCAT
TGCCGACTCAGACATACATTCCTCATTTTATGACCATTCACTTTGTTGTGTAGATTTTTT
ATTCCAACACCAACAAAAACATTTTCAATTCCATATAATCTTCTGATAATTCTATAAAAT
ATCTCACTATTTCACTCTTTTCACTATTTACAAAGTTCTAATTTAAGCTCCAAATGTTTT
TCATATTCATTCACTTTACAAAGGCTTCAGGCGGTATCTTGCCTTCGGAGTGTAGTTGAT
TAAAGATGAACATAGCCCTTTGCAAATCCCAGCCAGTTTCTTGAAGACAATTGATACTCC
AATGCTCATTCATTCCAGTTTGTTGACCAAGCATGTTGAGTAGCTGCATCTTCTGAGAAT
CATCTGGCGTCCCAGCTGCGAGCGTGGGAGTAGGAGTAGGCGTGGGCGCTGGAGTAGGTG
GAATCGGTTCTACAGTACCCGTTGAAAAGGCCTTATCCTCCTGTTCTTTAGTAGTATTCG
TGATATATAACATATCGTTGATGATTGAGAAGCCGCCATTCGCATTTGAAACTATCACGA
ACGTCCGATGAAACGAACGCATCGGGTTATTGGGAGTGTTCGTTTCTTTGAACACACCGT
TCATTGTAAGGACGATCATGGCCGGAGTAAAGACTAGTAAGTCGACAGCAAAACCCATTA
AATCGTGTGTTGTTTTTGGCAGATCTGATAGAAAGGAGACTACTTGCAGCTTTCCGGTAC
GTAGGTAACGCCTTCTCGACTCCCTTTCTGTTATTCGGGTTAAATTACGGCTGTTCGATA
TGTAAGAGTTTAACCTAGTTGTCGTAGAATTCCTGCTGTCATTAGTTAAATAATTTGCAG
CCATCGACATTGTAGCATTTTCATGGTACGCCTCTAGAAGTGGTTGCCGAGATTCCGAGT
CGTATATCGCATAGTATTGAGTGAGAAACTCCCTGACAAGATCCTGACCCGCCGGGTCTA
CCAGGAACGATTGTTGCCGAGGGGGAAGTCCCATATCTTCAGCTACGTCGAATCCAATAG
CCGGTGGAAGATCCGCGCCATCCTAATTTTTTTTTAATTTTATGTTTATTTACAATGTTG
AATCAATAGGCGTGATGAGATTATATAAACTGCAACAAATAGTAAAGCATAAACATAAGT
CGGAAAATAAAAAAAAGACTTACCAATCTTGTCAGCTTGGGAAACTTCTTCCGGACATCA
CTTATGTAGATTTCGTGATCATGAAACCTGTTCACCAGTGGGTTTCCTTTGAGGTATAGC
TCAACTAGCGGTAATGATCTGATTGGGTCCAGTGATCCAAGGAATGGAATCCTATTATCG
CCCATATACAATATTTTCAAATTCTTGAGCTTTGAAGACAAAACCTTGAGATGCTGCAAA
CCATGAAGCTTATTATCATTTAGGTTCAAAGCTTCTATGTCTGGAATATTCTCTGCTATT
ATATCTATAGCAGCCAACATTATCATTGGACGGAACAGTGCACAAAATATATCTTCTAGA
TCTGGATCAGCATGGAATTTTGTTAAATCTAATGCCTTAGTTGTAGCATTATACCTCTTC
GCCATTGTCAATTTCATCTTCTCTTTCATGGCAGCGTCAATGGCCATGTTTGGAACAGCA
TTCCTCACAATAACAATTAACTTAAAACCATCTGACATAGTGATCTTTCTATCAGCATTA
TAAAGTTTTTCAGCTGTTTTGACATCATCAACATAGAATACTGCAGCATTTCCATTGACT
TTATAGTAATGTGGAATGAATATGTCGGGTGAAAGAAAACCCAACAAGGCTCGGAGGATA
ACATCTTTTTCATGTTTTGCTCCATATGGAATGATTATTTGGTACCAAGGCAGTACACCA
GGAATAAATTTCTTTTTAGTGTGTCCGTGGCTTCCTTGCGGAGCTGGAGAGTACATTCTC
CCACGTCCCCTGAAAGAACTTTTCCGGACCGGTCCTTGAAGAGCAGAACTACCCATGTCA
ATATCATCATCAAGGAGGGCTAAAGGATTTTTCCAAGTTCGAAATTTATTTTTTCCTTTA
GCTCCAGGTTTAAAACTGACATGTCTCGGCACACTATTGACACGGTCATCGTGTTCAAAA
TGGTCAGTATCAGCCTTCCAATTTCTATTCCTTCCACCGCCACGTTTTGGCATCGTGTCG
AAGAAGCTTTAATCACCAGTATACAAATACCGTGAAAGTAGTTCTTTAAGGTTTCCTTAT
TTTCTCACATGCGTGTAGAATAGTTAACTGAGATAAAGCCAATGATAATTGAATAATAGC
TTTTTTTAATTAACAACGCAAATTACAAAAGAGTTAAACAACTTTGATGGTGTAAAATTA
CCCTACACTCAATAAATTTTAAGTATGGTTAGTTAAATTATATATTTGGACGTTATTAGC
AATCCAAATATTTCCAAAATTAATCACCAAAAACTAAATAGCGTCTCTCTTGTGAATCTT
AAACCTGTTCTTTTTCAATGTGAAACAAAATGGATGGCGACATTTGTAGATTATACACCT
GTATAACCTATGGATTACACTTCGTCTTTATTTTTGGCTCCGTACGGTTTGTGC
(4794 bp)

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