SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69234_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_54_[Bombyx_mori]
Ontology
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006896 P Golgi to vacuole transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0015031 P protein transport
GO:0019905 F syntaxin binding
GO:0030154 P cell differentiation
GO:0042147 P retrograde transport, endosome to Golgi
Transcript
Level		FPKM:1.15 TPM:2.00
ORF EntryO_BomoEE18074_complete:A_BomoEE_comp69234_c0_seq2
Sequence
(Nucleotide)
GCTTCCTTTCCGCTTAAAGTGATATTTTCCAGGTAGCCTTCCAAATGCGGTTCCCTTTCA
CTTTTGATGTTAGGCTTCAAATGTTCCTTTTAGAGATTTTAAACGTATGGGCTATATTTT
CTTTGCCTCCAAAAACAAAAAACGGGACAACAATTCAAATGTCAATGTCACTTTAACATT
TATCAAACGAGATGTCATGTCATCAGTTTTTAAAAAAAATGTAGCTATTTTTTTGCCTAA
GTTCAAGTTTTCTTAGAGTCAATATTCGAAATTCATAAAGAAAAGTGTACTTATACATAC
AGAAATCAATCTATACTAAAAATGTTATGGAGGAAAATTCATCATCAAGCACGAATCCAG
CATGGCAAAACTGTTCACACTGCCCCAGCCTTGTTTTCAGCACAGCAGCAGAATTTGAAA
GACATATACTAGATAAGCACTCCATAAAAGAGGGAACCATAATCCTTTGTCAATATGGAC
AAAATGGGATGTGCTCTGCATTACAATTTGGAGATTTACGGAAAGCTGGTTTTAAGTACC
ACATCCGAGAATATCATACATATACCAGGACACCTAATGAGTCTTGGACATTCTATTCTT
CTTCACAAAATCTCCCTGCAGTACTGAATGATCCGAATAGAGATGTAAGTCAAATGGAAG
ATGTTAATGGGAGTGATAATGAAGAGATTTGGTCAGCTGAAGAATTGACATCTATTGAAG
ACAAATTGAAAAAAATGATTGTTTCATTGTCAGATTACTGCAATGAAAGATGTGCTAACC
TAATTGTAACTAAAACAGACAAAGATTATGTGTGTTCTGATATGTCACAGTTATCTCTCC
TATCAAATTTGATTAAAGAATTTTGCACCAAATGTGAGGATGTAACCGGATATTGTAGTA
ATGCCATGAATTTGGCTCTAAGGAGCTTTGCTATGAAGTATATACAGACACTTCACACTG
AACGCAGATCTCAATTAACAGCTTCTCTAAATGCTGAACGATGGAAAACTGCAGATGTTC
CATATGAATTGCAAAGTGCAATCACAAAAATATGTGAAATTCAAGAAATACCTCCTAATT
TACTGTATGAAAGTGGGAAACCAGACGGAAAATATCTTTTTATAAACAAAGAAAGCTATG
CTCTGGTAGGGACAGTTCAACTACTTATAAAAATTTTATTGGAATACTGTGATGCAACCA
GACAATCTCCCATTATAGTTCAGTATTTAGTTCATTGTATGTTAGAATTATTAAGATTGT
TTAATTCTCGGTGCTGCCAACTTGTTCTCGGTGCAGGGGCAATACAAAGTGCTGGACTTA
AAACTATTTCTACATCCAATTTAGCTCTAGTATCTCGATCTTTACAGGTTATATTATGGT
TTTTACCTATGATAAAACAGCTGTTAGAGAAAATACATTCTTCTGAGGTATCATTGAGCG
GTTTTGTTGCTATTGAGAGTGATATTGCTAGCCATAAACAGGAAATAGAAAATAAGATTT
GCTTAATTGTAAGTAATATGTTATGTTCTCAATTAACAGGGTGGGATGCAAAGCCCCCAG
TTCCTTCTCAAACATTCCGCAATATTTCAAAACATTTAGTGAAGTTACATGAAGCATTAA
TTGATATTTTGCCACCTGAACAAATAAAGTTTATATACAAACGAGTACATGATAATTTTA
AAGATAAATTAAGAGAACAACTAATTAAAATGAATATAGTTGCTAATGGAAGCCCCCAAC
ATGGTGTAGTGACTTCTGAATTGACATTTTACTTACAAACTCTAAAGACACTCAGAGTTA
TAAACGATAATGATGCAGAAGACAATATACTATATGACGTTTGGTTAAATTAACTTTTCC
AATATTTTATGTAAAGAAAACTATCTATTTATAAATATTACATTAAGTCATCACTTCTAC
TTAAAATACTTTATGATGATGAAATATTGTTCTCAAATGCAATTGTAGAAACAAACCAAA
AAGGTATTTTTATTTCAGAACTAGTTAGCAAAATAAATAAAAATTATCGGTTTTGAAAAA
ATCGATGATTAAGCTATTGTCATTTTTTATTAGAATCTTTAGAGGCGATCATATTATGTA
CTATAGATAACCAATCTGAACATGGAGATGCGATTGATAGGTATTTAATCTAAAGTTTAA
ATTATTAATCTAACATGTATTTATTTCAAGTGTTTTAAGTTTTAATATAAATATTTATTT
TAATTCAGATGTGTTTTTTCGAGTATATTTAAACAAAAAAAGGATAAAATAGCTGACAAT
CCTAAACGAATCCAAGTAAAGATTTTCTGAGATTTTTGCTTTCAACACACGACGGCTATT
GGTATAGCTTAACTATGGAGGGTAGAGGTAAGGAATACCATCTTGTACAGGAAACAGGTT
TAAAAAGTGCCCACCTGTAAACATCAAAATTATTGTTGGTAGACTGACCGAAATAGTGCT
AGTATGGAACAAGGGCGGATCCACCTTTGGCGCCAGGAGGGGGTCACACAGTCAAATTTT
CGATGCGCTCGTTCCCAAACGCTTGCCATCATACAAAGTTATTATATTATATTA
(2574 bp)

- SilkBase 1999-2023 -