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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69147_c0_seq7
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106119215_[Papilio_xuthus]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.25 TPM:2.17
ORF EntryO_BomoEE17889_complete:A_BomoEE_comp69147_c0_seq7
Sequence
(Nucleotide)
TGTCATTGTCCTTGACGGTCTTATTGCTTTAAAAAAAAAAGTTAAAATACATTTTCCATC
CCACTCGATACTGAGTCATTTATCCATTGAAGCCTTTAGTTACAACATCGCACGCTCACT
CGCACCGGGCGGCGATAAGCCAATCCAGTTTGACAATTCGCTAGCCTCGGATCAGCCGCC
GGCTCAGTTGGCCGATGCACGGCGTCGCGGTAACGTGTCCGCCATTTTCCCGCGCTACCC
ATCCCGACGGTATCAAACACCGGGCTGTTTATTAAATCAAAAATTAATGTGCTATCTCCG
TTTCTGTTTGCACAAATGTGAATCGAGAAACTTTTATATCCAAAGACAAAGTGAACTATA
AGTAATTCAAACCGCAACCAAGCATTCCAGTCTAACTCTTAATGTTGCCATAATTAAAAA
AAAAAAACTACCTTTTTATTACTAAACAAGGCATCCGTTTAATACGAATAAGTGAATAAA
AAATTGTGTCAAGATCAATAAGTGTGTGTCAAGGGGCTTACAACTTTCCTTTTGTAGCAG
TCGATGACATCGATCGTTGTAAAACAGTGGTGGATCGTTTAAATTAAACCTTAGTGGCTA
TAAACGGGCTTATTGTGGAAGGATTTTGGCGTATCCTTTCACAATACCGGTGCGAGCGAT
TTTGTTGTTCAAAAAACTATCGACAAAAAAGTGACGAAACTAATACGCGAGTGAATAAAA
AAAAAAACTAAATAAAAAAAATAAAAAAACATTCTAATTTTGAAATGCTTCGAGTGCGCG
CGTGAATAATGTCAACACAAGCGTACTACAAGGAGCGTTTGGGCTTCGACCCCCAAGAGG
CGATGCAAGATGGCGTCAACGGAAACGGATTTTACGACGGCCCACACCAGCCGAAGCGGC
AGAGGAGCGAGCAGCGCCACCCTTCCGAGACCCACGATCAAGTCTACGAAGAAAACCTAA
CTAAATTCAAAGACGAACGTGACGCTATACAGAAGAAGACGTTTACAAAATGGGTCAACA
AACATCTCAAAAAGGTGAATCGTCACGTGAACGATCTGTTCGAGGACCTACGCGATGGAC
TGAACCTCATCTCGCTGCTGGAGGTGCTATCTGGCGAACATCTCCCGCGCGAGCGAGGTC
GCATGCGTTTCCATATGCTGCAAAACGTCCAAATGGCCCTGGACTTCCTCCGCTACAAGA
AAATCAAGCTCGTCAACATCAGAGCTGAGGATATCGTCGACGGGAACCCAAAGCTGACCC
TAGGTCTGATCTGGACTATCATCCTGCACTTCCAGATATCAGACATCGTCGTTGGACAAG
AACCAAACGTGACGGCCCGGGAAGCTCTCCTGAGCTGGGCCCGACGCTCCACGGCCAAGT
ACCCTGGGGTGAGGGTGAGCGACTTCACGTCTTCTTGGAGAGACGGGCTCGCCTTCAACG
CGCTCATACACAGGAACCGCCCTGATCTGATAGACTGGCGTAATATCAGATCAAGACAAG
TCCGTGAGCGCTTGGAGACAGCCTTCCATGTAGTCGAAAAGGAATATGGAGTCACCAGAC
TGTTGGATCCTGAAGACGTGGACACCCACGAGCCGGACGAGAAGTCCCTCATCACGTACA
TCTCGTCGCTGTACGAGACGTTCCCGGAGCCCCCGGCCGTGCATCCGCTGTTCGACGCGG
AGTCCCAGCGCCGGGCGGCCGCTTACACCGAGCAGGCGGCCCAACATCGCGCTTGGCTGC
ACGAGAAATGCGCGCTAATGCAGGACCGTGCTTTCCCGTCAACTTTGATAGAAATGAAGA
AGCTGCTCAGCGAGAGCACGCGGTTCCGCAACGAGGAGGTGCCGCTCAGGCAGAGAGAGA
AGCAGAAGCTCGTCCACCAGTACAGGGAGTTAGAGAAATATTTCGAAACAGTGGGCGAGT
GCGATATCGAGCCGACGCTGCGCCCCGAGGCGCTGGAGCAGGGCTGGGCGCGGCTGCTGA
TGGCGCAGCAGGAGCGGGAGCGCGACCTCACCGACGAGATTCGGCGCCTCGAGCGCCTGC
AGAGACTGGCCGAGAAACTGCACAGGGACATCAAACAAACCGAAAGCGGTCTGGACAGCG
TGGAGCGGCACATCGAGGGGGAGCTGCGTCGCGTGGAGCGCGGCGTGCACCCCGCCGACG
CCAAGACCGCCGCCGAGCAGATCGAGCACGACCTGCGCGCCATGGAGCTCGCGCTGCACG
AGATGTTCCAGGACGCGAACGCGCTCCGGGAGGGGAGGTACCCGCAAGCCAACGAGCTGC
ACAGGCGCGTGCAGCAACTCCAGGAGCGCTGGGCGCTGGCCCGACAGGCGCTGGCGAGCC
GGCTGGTGCCGCGGCTGGCGGGCGTGCGCATGCCCGTGCAGCACACCACCGTGCGCCGCG
AGACCCGCACCGTGCTGGAGACGCGCGTGCACGATGCCGACCCGCGCTTCCACCAGCTCG
CCGACGCCGCCGCCTGGTGCCGGGACAAACTGAAAAAACTTCACGAATCAGAATACGGCT
CCGACCTGCCGTCGGTGCTGCACGAGCTGGACAAACACCAGCGGGAACACAAACTGATCG
ACCAGTTCCATTCCAAGGTTGAACAGTGCGTCCACAACCGCTCCAACTTCAACGGCGAAG
AGTTGAATTTGTACAACCAGCATCTGAGTCAGTTGCAAAAGTTATACGCCGAGCTACTGT
CTACTAGTACTAAGCGGATGTCGGATCTGGACGCGTTACACGACTTCCTTCAATCAGCGA
CGGCGGAGTTGAACTGGCTCAACGAGAAGGAACAAGTGGAGTTGTCTCGCGACTGGGCCG
ACCCGCACATCAACCTGCCCGCCGTGCAGCACTATTACGAGCAACTCATGTCGTCCCTTG
AGAAGCGGGAGCTCCAGTTCAGCAACGTGATCGACCGCGGCGAGGCGCTCATCGCGCAGC
ACCACCCCGCCACCAAGACCATCGAGAGCCACCTGCAGGTGATGCAGTCTCAATGGGCAT
GGGTGCTCCAGCTGACCCTCTGCTTGGAGACCCACTTGAAACACACCACGCAGTACCACA
CCTTCTTCGAGGAGATCAAAGAGGCGGAGAAATGGATCGCAAAACGCGAGGAAGCATTAA
ACACGACATTCTCCCAATCGGAGTTCACCTTGGACCAGGGGGAGAGGCTCCTCAAGGGCA
TGCAGGACCTTCGGGAAGAGCTGAACACGCACGGAGCCGCCGTGTCGCGTCTCGTCGAGG
AGGCGCAGGAAGTCAGGCCCGTCAAGCTGCGGAGGGCGCCCGTCACCAGACCCATCAGGG
CTGAGACCGTATGCGCGTACAAACACGCTAATGTGGCGATCGAGAAGGGCGCGTCGCTGT
CGGTGGTGGACAACTCCGGGCGCAGCCGGTGGCGCGTGCGGCTGGGCGGCGCGGGCTCCG
AGGCGCAGGTGCCGG
(3435 bp)

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