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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69147_c0_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106119215_[Papilio_xuthus]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.84 TPM:6.69
ORF EntryO_BomoEE17876_complete:A_BomoEE_comp69147_c0_seq2
Sequence
(Nucleotide)
TAGACAGTCGCATCATGTCAGTCCGCCGGCTCGGTGTATGACGCTCAACGAATTCTATAA
CCTATAAATCGTTTGTTGTCACTCCGTCCCTTTGAACAGGAGTTTGTTGCAGTCAATCTT
AATATTTTTTTCTTGAATATTAGTGCTATGCAAGTGTTGATTATATTGTTAAGCTAACAG
TTTTTAAGGGTATTGAAGCGCGCTGTGATATGCGCTAACTTTATTGATTTTCATGTTACA
ATGAACGTAACGTATTGTTTACTTTTTATTTGTATTATAATCTAAAACATGTGTTTGTTG
TGTAATATTCGGTGGTAGTGTTGTGCTGTGATCAATTCAATTATGTGCGAGAGTTCGCGC
GAGACTTCGTGTTTTGGATGACAGAAAAATGGAATTCGAAAACGATTTCAGCTTGAAAGA
ATGGGCGAAGGACAAGCCTTTGTCCATTCTGCAGTTGGACCCGGCCGACCGTGCAGTCCT
CAGGATAGCAGACGAACGTGACGCTATACAGAAGAAGACGTTTACAAAATGGGTCAACAA
ACATCTCAAAAAGGTGAATCGTCACGTGAACGATCTGTTCGAGGACCTACGCGATGGACT
GAACCTCATCTCGCTGCTGGAGGTGCTATCTGGCGAACATCTCCCGCGCGAGCGAGGTCG
CATGCGTTTCCATATGCTGCAAAACGTCCAAATGGCCCTGGACTTCCTCCGCTACAAGAA
AATCAAGCTCGTCAACATCAGAGCTGAGGATATCGTCGACGGGAACCCAAAGCTGACCCT
AGGTCTGATCTGGACTATCATCCTGCACTTCCAGATATCAGACATCGTCGTTGGACAAGA
ACCAAACGTGACGGCCCGGGAAGCTCTCCTGAGCTGGGCCCGACGCTCCACGGCCAAGTA
CCCTGGGGTGAGGGTGAGCGACTTCACGTCTTCTTGGAGAGACGGGCTCGCCTTCAACGC
GCTCATACACAGGAACCGCCCTGATCTGATAGACTGGCGTAATATCAGATCAAGACAAGT
CCGTGAGCGCTTGGAGACAGCCTTCCATGTAGTCGAAAAGGAATATGGAGTCACCAGACT
GTTGGATCCTGAAGACGTGGACACCCACGAGCCGGACGAGAAGTCCCTCATCACGTACAT
CTCGTCGCTGTACGAGACGTTCCCGGAGCCCCCGGCCGTGCATCCGCTGTTCGACGCGGA
GTCCCAGCGCCGGGCGGCCGCTTACACCGAGCAGGCGGCCCAACATCGCGCTTGGCTGCA
CGAGAAATGCGCGCTAATGCAGGACCGTGCTTTCCCGTCAACTTTGATAGAAATGAAGAA
GCTGCTCAGCGAGAGCACGCGGTTCCGCAACGAGGAGGTGCCGCTCAGGCAGAGAGAGAA
GCAGAAGCTCGTCCACCAGTACAGGGAGTTAGAGAAATATTTCGAAACAGTGGGCGAGTG
CGATATCGAGCCGACGCTGCGCCCCGAGGCGCTGGAGCAGGGCTGGGCGCGGCTGCTGAT
GGCGCAGCAGGAGCGGGAGCGCGACCTCACCGACGAGATTCGGCGCCTCGAGCGCCTGCA
GAGACTGGCCGAGAAACTGCACAGGGACATCAAACAAACCGAAAGCGGTCTGGACAGCGT
GGAGCGGCACATCGAGGGGGAGCTGCGTCGCGTGGAGCGCGGCGTGCACCCCGCCGACGC
CAAGACCGCCGCCGAGCAGATCGAGCACGACCTGCGCGCCATGGAGCTCGCGCTGCACGA
GATGTTCCAGGACGCGAACGCGCTCCGGGAGGGGAGGTACCCGCAAGCCAACGAGCTGCA
CAGGCGCGTGCAGCAACTCCAGGAGCGCTGGGCGCTGGCCCGACAGGCGCTGGCGAGCCG
GCTGGTGCCGCGGCTGGCGGGCGTGCGCATGCCCGTGCAGCACACCACCGTGCGCCGCGA
GACCCGCACCGTGCTGGAGACGCGCGTGCACGATGCCGACCCGCGCTTCCACCAGCTCGC
CGACGCCGCCGCCTGGTGCCGGGACAAACTGAAAAAACTTCACGAATCAGAATACGGCTC
CGACCTGCCGTCGGTGCTGCACGAGCTGGACAAACACCAGCGGGAACACAAACTGATCGA
CCAGTTCCATTCCAAGGTTGAACAGTGCGTCCACAACCGCTCCAACTTCAACGGCGAAGA
GTTGAATTTGTACAACCAGCATCTGAGTCAGTTGCAAAAGTTATACGCCGAGCTACTGTC
TACTAGTACTAAGCGGATGTCGGATCTGGACGCGTTACACGACTTCCTTCAATCAGCGAC
GGCGGAGTTGAACTGGCTCAACGAGAAGGAACAAGTGGAGTTGTCTCGCGACTGGGCCGA
CCCGCACATCAACCTGCCCGCCGTGCAGCACTATTACGAGCAACTCATGTCGTCCCTTGA
GAAGCGGGAGCTCCAGTTCAGCAACGTGATCGACCGCGGCGAGGCGCTCATCGCGCAGCA
CCACCCCGCCACCAAGACCATCGAGAGCCACCTGCAGGTGATGCAGTCTCAATGGGCATG
GGTGCTCCAGCTGACCCTCTGCTTGGAGACCCACTTGAAACACACCACGCAGTACCACAC
CTTCTTCGAGGAGATCAAAGAGGCGGAGAAATGGATCGCAAAACGCGAGGAAGCATTAAA
CACGACATTCTCCCAATCGGAGTTCACCTTGGACCAGGGGGAGAGGCTCCTCAAGGGCAT
GCAGGACCTTCGGGAAGAGCTGAACACGCACGGAGCCGCCGTGTCGCGTCTCGTCGAGGA
GGCGCAGGAAGTCAGGCCCGTCAAGCTGCGGAGGGCGCCCGTCACCAGACCCATCAGGGC
TGAGACCGTATGCGCGTACAAACACGCTAATGTGGCGATCGAGAAGGGCGCGTCGCTGTC
GGTGGTGGACAACTCCGGGCGCAGCCGGTGGCGCGTGCGGCTGGGCGGCGCGGGCTCCGA
GGCGCAGGTGCCGG
(2954 bp)

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