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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69147_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106119215_[Papilio_xuthus]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0016528 C sarcoplasm
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043034 C costamere
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.44 TPM:0.76
ORF EntryO_BomoEE17869_complete:A_BomoEE_comp69147_c0_seq1
Sequence
(Nucleotide)
GATCTATGTAATTTTTGCCAAAAATAAATTTTAATAGAATAAATAAATATAAGTAATAAA
TTGTGTAAGAATTATATGTACTTCCGAAATACGGACAGTTTTTAATACGAACGATTTGTT
CTAACCGACTGAATAAGTTAACAGCATAGACAAACGAGGCCGTAGACAATTACTGAAATC
TCCGTTCTCACAGCCATATTCAAAGTCGTTGTTTAAAAAAAAAAAGAACGCGTAAAAACA
TGACTCATTAATATTGTGAAGCAATTTCGAGTGAAACATTTAAATCATCATATTCTTTTG
TCTTGCAGGCTATCTCCGTTTCTGTTTGCACAAATGTGAATCGAGAAACTTTTATATCCA
AAGACAAAGTGAACTATAAGTAATTCAAACCGCAACCAAGCATTCCAGTCTAACTCTTAA
TGTTGCCATAATTAAAAAAAAAAAACTACCTTTTTATTACTAAACAAGGCATCCGTTTAA
TACGAATAAGTGAATAAAAAATTGTGTCAAGATCAATAAGTGTGTGTCAAGGGGCTTACA
ACTTTCCTTTTGTAGCAGTCGATGACATCGATCGTTGTAAAACAGTGGTGGATCGTTTAA
ATTAAACCTTAGTGGCTATAAACGGGCTTATTGTGGAAGGATTTTGGCGTATCCTTTCAC
AATACCGGTGCGAGCGATTTTGTTGTTCAAAAAACTATCGACAAAAAAGTGACGAAACTA
ATACGCGAGTGAATAAAAAAAAAAACTAAATAAAAAAAATAAAAAAACATTCTAATTTTG
AAATGCTTCGAGTGCGCGCGTGAATAATGTCAACACAAGCGTACTACAAGGAGCGTTTGG
GCTTCGACCCCCAAGAGGCGATGCAAGATGGCGTCAACGGAAACGGATTTTACGACGGCC
CACACCAGCCGAAGCGGCAGAGGAGCGAGCAGCGCCACCCTTCCGAGACCCACGATCAAG
TCTACGAAGAAAACCTAACTAAATTCAAAGACGAACGTGACGCTATACAGAAGAAGACGT
TTACAAAATGGGTCAACAAACATCTCAAAAAGGTGAATCGTCACGTGAACGATCTGTTCG
AGGACCTACGCGATGGACTGAACCTCATCTCGCTGCTGGAGGTGCTATCTGGCGAACATC
TCCCGCGCGAGCGAGGTCGCATGCGTTTCCATATGCTGCAAAACGTCCAAATGGCCCTGG
ACTTCCTCCGCTACAAGAAAATCAAGCTCGTCAACATCAGAGCTGAGGATATCGTCGACG
GGAACCCAAAGCTGACCCTAGGTCTGATCTGGACTATCATCCTGCACTTCCAGATATCAG
ACATCGTCGTTGGACAAGAACCAAACGTGACGGCCCGGGAAGCTCTCCTGAGCTGGGCCC
GACGCTCCACGGCCAAGTACCCTGGGGTGAGGGTGAGCGACTTCACGTCTTCTTGGAGAG
ACGGGCTCGCCTTCAACGCGCTCATACACAGGAACCGCCCTGATCTGATAGACTGGCGTA
ATATCAGATCAAGACAAGTCCGTGAGCGCTTGGAGACAGCCTTCCATGTAGTCGAAAAGG
AATATGGAGTCACCAGACTGTTGGATCCTGAAGACGTGGACACCCACGAGCCGGACGAGA
AGTCCCTCATCACGTACATCTCGTCGCTGTACGAGACGTTCCCGGAGCCCCCGGCCGTGC
ATCCGCTGTTCGACGCGGAGTCCCAGCGCCGGGCGGCCGCTTACACCGAGCAGGCGGCCC
AACATCGCGCTTGGCTGCACGAGAAATGCGCGCTAATGCAGGACCGTGCTTTCCCGTCAA
CTTTGATAGAAATGAAGAAGCTGCTCAGCGAGAGCACGCGGTTCCGCAACGAGGAGGTGC
CGCTCAGGCAGAGAGAGAAGCAGAAGCTCGTCCACCAGTACAGGGAGTTAGAGAAATATT
TCGAAACAGTGGGCGAGTGCGATATCGAGCCGACGCTGCGCCCCGAGGCGCTGGAGCAGG
GCTGGGCGCGGCTGCTGATGGCGCAGCAGGAGCGGGAGCGCGACCTCACCGACGAGATTC
GGCGCCTCGAGCGCCTGCAGAGACTGGCCGAGAAACTGCACAGGGACATCAAACAAACCG
AAAGCGGTCTGGACAGCGTGGAGCGGCACATCGAGGGGGAGCTGCGTCGCGTGGAGCGCG
GCGTGCACCCCGCCGACGCCAAGACCGCCGCCGAGCAGATCGAGCACGACCTGCGCGCCA
TGGAGCTCGCGCTGCACGAGATGTTCCAGGACGCGAACGCGCTCCGGGAGGGGAGGTACC
CGCAAGCCAACGAGCTGCACAGGCGCGTGCAGCAACTCCAGGAGCGCTGGGCGCTGGCCC
GACAGGCGCTGGCGAGCCGGCTGGTGCCGCGGCTGGCGGGCGTGCGCATGCCCGTGCAGC
ACACCACCGTGCGCCGCGAGACCCGCACCGTGCTGGAGACGCGCGTGCACGATGCCGACC
CGCGCTTCCACCAGCTCGCCGACGCCGCCGCCTGGTGCCGGGACAAACTGAAAAAACTTC
ACGAATCAGAATACGGCTCCGACCTGCCGTCGGTGCTGCACGAGCTGGACAAACACCAGC
GGGAACACAAACTGATCGACCAGTTCCATTCCAAGGTTGAACAGTGCGTCCACAACCGCT
CCAACTTCAACGGCGAAGAGTTGAATTTGTACAACCAGCATCTGAGTCAGTTGCAAAAGT
TATACGCCGAGCTACTGTCTACTAGTACTAAGCGGATGTCGGATCTGGACGCGTTACACG
ACTTCCTTCAATCAGCGACGGCGGAGTTGAACTGGCTCAACGAGAAGGAACAAGTGGAGT
TGTCTCGCGACTGGGCCGACCCGCACATCAACCTGCCCGCCGTGCAGCACTATTACGAGC
AACTCATGTCGTCCCTTGAGAAGCGGGAGCTCCAGTTCAGCAACGTGATCGACCGCGGCG
AGGCGCTCATCGCGCAGCACCACCCCGCCACCAAGACCATCGAGAGCCACCTGCAGGTGA
TGCAGTCTCAATGGGCATGGGTGCTCCAGCTGACCCTCTGCTTGGAGACCCACTTGAAAC
ACACCACGCAGTACCACACCTTCTTCGAGGAGATCAAAGAGGCGGAGAAATGGATCGCAA
AACGCGAGGAAGCATTAAACACGACATTCTCCCAATCGGAGTTCACCTTGGACCAGGGGG
AGAGGCTCCTCAAGGGCATGCAGGACCTTCGGGAAGAGCTGAACACGCACGGAGCCGCCG
TGTCGCGTCTCGTCGAGGAGGCGCAGGAAGTCAGGCCCGTCAAGCTGCGGAGGGCGCCCG
TCACCAGACCCATCAGGGCTGAGACCGTATGCGCGTACAAACACGCTAATGTGGCGATCG
AGAAGGGCGCGTCGCTGTCGGTGGTGGACAACTCCGGGCGCAGCCGGTGGCGCGTGCGGC
TGGGCGGCGCGGGCTCCGAGGCGCAGGTGCCGG
(3453 bp)

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