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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69043_c0_seq2
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_branchpoint-bridging_protein-like,_partial_[Amyelois_transitella]
Ontology
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:4.58 TPM:7.98
ORF EntryO_BomoEE17612_5prime_partial:A_BomoEE_comp69043_c0_seq2
Sequence
(Nucleotide)
CGCCGCCGCGCTGTCCGCCGCCGCCGCCGTGCCGCCGCCCACCTCCGTGCAGCAGAAGCT
GGAGCTGTTGCAGGCCAAGCATCGGGACCGCGACCACCACCCCGATGACGACAAGGACGA
CGGACTGGGACCGCCCGGCGAGACGGCGGCGGAGCGTCGCGCGCGGCGGCGGCGCACGCG
CTGGACGGGCTCCGAGCACGACAAGACGTTCATCCCCGGCCTGCCCACCGTGCTGCCCTC
CACCCTCACCAAGGACCAGGAGGAACAGTACCTGCGTGAGTACCCGCCCCGCCCCCCGCA
CCCGCACCACGACTGTACAACAACTAAAGCTATACGTCAAACTCATATATCTCTTAACAA
CGTTGCAATTTCCTGACTTTGGAAAATGTTACACGAGATTCGTCTGTTTAATTTTGTTTG
TTTCGGTTAAAAATCTACACCTTTCGTAGTCCAACCGTCATTAATTTTAATATCACAAAA
GATCAAATTTAGTTGTTATACAATCACTATTCTTATTGTTCTGTTTTATAATTTTATTAG
CAATTGGTATTCAATTGTTTTCAATGTAATGCCGTCGTATTGACTTTATTGGTTAATTTG
TTTGTTCAATTCTTTGATTGTAATTATTTTTAATATAATATGTTCAATATTAATCGATAT
GGAGAATTGAACAATCAAGCTCAGAATTGTTTAGCTGTGTGAATTATTATTCAAATATTA
ATCAGTCAAAATAATATTGGCCTCTCTAATGTTACTCGCCACGGGCATGCCAAACTAAAC
AACATTTGGAAATTTATTTATTCTTAAATTTTATGTTGTGATTAGAGATGCCAATCGTGT
ACTTAACTGAGTTTCTGATTATGACCTGATGTTTCTATAATGGATAAATTATGAAGCTTC
AGTAGTATGTCATTAGTTAATCACATATACGATTTAATACAAATTATCATTAACTAAAAT
CTACTACTGAAATTTGAGCATATCGAATTTAATTTTCTCAATTATTATAAAGTCTCTATA
ACAAAAATAAAAAGTAATTGCAATGAATCCCATAAAAATGTGTATTGAAAAATGCTTAGT
AAAGATGATTGGTCAGTATTAACAAGAGATTTAATCGTTGACAAAGATGAGGAAGGTCAG
CGCTGCGAGGTAGGTAGCTAGTGCGGAGAGGGATGCTATCTAATGTGTTGTGTTGTCGCG
GGTCTAATCCGTTCCTTGCAGTGCAGCTGCAGATCGAGGAGGTCAGCCGCAAGCTCAGAT
CCGGCGACCTCGGCATTCCGGCCAACGTCGAAGAGAGGTACTCCTAAAGAATAAGTATTC
CATAAACTAATCACTTTTGTTTATTACGAGTATAATAACGGACCAGGCGAAATGAGCAGG
CGTGTAAAGTATTCGTTGATATTTCCAGAGTGGTTTATTTCATGACAAAATTAATATATT
TTATTTTGTATAATAAAAAATTTAGGTACATACCGATTCTGTTTGGTGAAAACTTTGAGC
TAAAAATAATGTTTAGTAAAGATAAAAATTGGAGCCATTATATATTTTATTACAATATTA
CAGTCTTTTAGAACTACTTTAAAGCCATTTTTAAAACTATTTTAACAAATCTTACCAGAT
TTATAGTGTTAGTCAAGTCCCAGTGTTTAAAATTTTTACTCTATAAATTATTATGTATCC
ATGATACAAACAAGTTAAACAGAATGTGATAAAAATGTATTGGAGGCCATAATTTGTAAA
CGGTTTATCGTGAAAATTTACATTCCAATTAATATTCTGTTTACAGGAGAGAGAACCTTT
GAAAAGTGCTACACATAATTCATTAAAATACGTTTTTAATGTAAATGCCCTTTCAGCAAT
TTTACTTTTTATATAACTATACTAAACTATACTTTGGCTTTACTATATTTACATACCTAT
TTTGGCCAAGACAAAAAAAATAAATAAAAAAAATAATATTAGTGAAATTGAGAACCTTAA
TTTCTTTATTGAAATAATAAAACAGAAAAGATATAATCAAGCTACTAATGCGAAATTTTT
CTTAATTTTGCAGGTAATACGCATTCCTACAGACACGGTTCTAATAAACAATAATAACGA
TAAAATATACAATAACCGTAATAATCTTTTTCAGCACACACAATAATCTAATTATTTTCA
GGGCTGAAAATGTGCTAATTAATAATTATTTTCTAATTAAAATTTCAGGTCAAAATAATT
ATTTTTATTTCTCAGGGCTTTAGGGCGAAGCTTAGGTCTTAGATAGGTTTAGCACGATGT
TGCCAGGGTTAAGGGTTGATAATATTGGTGTTGCTACACTACACCGGCTGTAGCAACACT
GCACTGAGTTGGTGTATTTTTATAAACTATTATTTATAAAAGTACAATAACTTAGTTTCT
ATAGAATTCCTCACTGAATTACTTCATGCAAGCCGTACTAATACTTGAGTCATTTGGGTA
TATATTTAAAAAAATCTGAAAAACGTGTAAAGACGTCAGGGCCAGAGAGCCAGATGATAG
AAATGCATAAAGACTTCGTTTTCAAAATTCGTCACTTTTAATCAATTACCAAATGTTCAT
TCGATTTAATTGAAAGTGACAATACGACAACTGCTGTCGTGCTAGATTACACGCTCTAAA
AATTACGTGAAGCACGCTCACAGCTGTCAGTGGTAATGACAAGACAATGGACCCGCCGAG
AGTGGGGTCCTCATTTACGCATGACCTAGTATTAGTACTTCTTGCATGAGGTTTTAGAAC
GAAGTGATCCAAGTTTTCTCACGTACATCAGATCACCATCGCCGGAGCCCATATACTCGA
CGGACGGCAAGAGGCTGAACACCCGCGAGTACAGGACCAGGAGGAAGCTTGAGGAAGAGA
GACACAGGCTGGTGCAAAGGATGCAGCAGGTCAACCCTGAGTTCAAACCTCCGCCCGACT
ACAAGCCGCCGATAATAAGGGTGCACGACAAAGTGATGATACCCCAGGAGGAGCACCCCG
ATATCAACTTTGTCGGACTCCTCATCGGGCCGCGAGGGAACACTCTTAAAGCGATGGAAA
AGGAAACCGGAGCCAAGATAATAATCCGTGGGAAGGGCTCGGTGAAGGAGGGCAAGGTCG
GGCGCAAGGACGGGCAGCCGCTGCCCGGGGAGGACGAGCCGCTGCACGCCTACATCACCG
CCACCAACGCGGACTGCGTCAAGAAGGCCGTCGAGAAGATTAAAGAAGTGATCCGCCAAG
GCGTGGAGGTGCCGGAAGGTCAGAACGACCTCCGCCGGATGCAGCTCCGCGAGCTGGCGC
AGCTCAACGGCACGCTGCGGGAGCACGACGCCGCGCGCTGCGCCAACTGCTCCGCCACCG
ACCACAAGACCTGGCTCTGTCCCGACAAGCCCAACGTCACCTCCGCCATCGTCTGCTCCT
CCTGCGGCGGCGCCGGGCACATCGCCAGGGACTGCCGCGCCCGCAGACCCGGCCACCACC
AACCCGATAAGGCTAAGATAGATGAGGAGTACATGTCGCTGATGGCGGAGCTGGGCGAGT
CCGGGCCGCCCGCCCCCTCGCCCCGCGGCTTCGCGCCCGCACCCCGCGCGCCA
(3593 bp)

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