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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69027_c0_seq3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X1_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0036064 C ciliary basal body
GO:0036459 F thiol-dependent deubiquitinase
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070536 P protein K63-linked deubiquitination
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
Transcript
Level		FPKM:0.56 TPM:0.97
ORF EntryO_BomoEE17587_3prime_partial:A_BomoEE_comp69027_c0_seq3
Sequence
(Nucleotide)
GCGGTGTCGAGCGCGGCGCCGCGGGCGCACTCCGCACACTCCCAGCGCGCCAGCCCGCCG
CACACAGCGCACTGCCGCGGAAGTCCTTCAATGAGATCAGTGACGTCCAATAACGGCGAT
GGCATTACACGCTGATACAGTTTGTATTGTTTCCCGAACCTCGGCATTTGGATTATGAAA
GCGGCCGGGACCTCGCTGAGTTTCACACCCGAAGTAGCAAACGACTGTTCGAGCAGTTGC
TGCACCGTCGGCAGGGAGACGTGTTCATCCTTTTCGACAAAGAGCTGATAGCAGAACGCT
TCTTGGCCTGATGATAATTTGAGAAAAGGTTCGGCCCGTAAGATCTGTGCCACTAAGCCG
TTCAAGAACTCTTCCGGATCCTTTTCTTCAGAAGTGAGTCCCGGCACATCGGAGAGTCGT
TCGAGCAGCGTGCGCAGTTTCATAACCCTGTCGGCGCGGACGTACCCGTGCTTACGGAGC
GGGTTCACGATTTCTTCGCGCAGTACACGCTGCACTTCCGAATAATGCGGTGAATCCTCT
GGTTCCGGTGGCCTGTACAACAACGCGTCGAACACGCTTGTAAAGGTGAACATAGCGAAC
AGCGTTGCGTCGAGATAACAAGAATTGTGATGACCTTGAATACCCCTGTTTTTGCCTGCT
AGGTCCCCCAAGGAAGTAAGCGGTGGGATCACGCCTGGTACTACAGGACACTCTGGCTGT
TCGCTAAGTTGAACATGGTGGAGGTCGGGTCTGTCGGGCGGGGGCGTGTCGCGGAAGCGT
GCGTCGCGGCGACACAGTGGCAGCGGCACGAACAGTGCCCTTCCCGGTGCGCACTCGAAC
AACTGCACGCCGCCGCGGCTGCCGTCCCCCAGGCCGCACACGCTCTCCTCCAGCTCGACA
CCCGCGGTTGCAGTGTCATCAATGATACCAATCCACCTCACAACTCCGTAGTAATGTTGA
TCTACATCTGTAGCAACCTCCACCAGGGATCCCACGCCGATTTCGTCTTGTAAAATATCT
ACCGAAGCTTTTGGAATCGGCGCCACAGCCCGAGGTGAACCCAAAGCTGGAGAATCGTAG
ACATTTTCGCGTTGTTCAGCGCTGCACACGTCAACTAAGATTCCAGTTTCTACAGTTTTA
GGTTCTTGTATCATTTTGGGTTTTTGTTGATTTTCTTCAGTACTAAGAATAGGACTGTTG
CTTGATGTTGATTTAATCCTACGTCTATCAGGTGCCAAGTGAGCTATAAGGTTGGCAGAT
TTCACTCTGTCATTGTGTGAATTGCGCTGCATGGTTGCTGTGGAGTGCTTAGACATTGAT
CCATAATCAGCACACTCAGGTTCTCGAGGAGCCGGTGGCCAGCTTCCTCCAATTAAATGA
AATAAATCAACCTGGTCATTTGCGTTGATCAATATATTATTTCCAATCATTTTATTGTTT
TCGTCATTCATTGTACAGTTTTGAATTAGAATCTACAAAATTATTTTTTGAGCATAAAAT
CTTTTGTTATTATTAAATTTTTTGATACTTTATTTACTTCGCTTTTTCGTAAAAATACAA
GCAGACAAGCGGACTGTTCACTTGATGTTCAGTGGTTTTCAAAGAATTTAGACTAGACAT
GAATACTGCTGCCGGTCTTGCAACATGGGATTAAAGTTTCAAATGTGGCAATTGTCCTAT
CATTAAACTGGAGAAAAACACTTTTTTCACTTGATTGGTACCTAACTAATCAAGTATTAT
CTACATGGAGAGCACCAAGAGATTACAGTAATTTATCGGTCTCGCAAGTCTTAGTCATAA
TTACTAAGCTGTTTGTTATTCGTAGACTTCACGAAAACTGTGGCGCGAGATAAAATCACA
AAAGTAGTTTCAAGTTTATAAGTAATTCGAAAAAAAAAAAAACAATTTCAAATGACATAC
CCCAATTAAAAAGTGTCACACATTTTTGTTTGTTTTCATAAATAATTACCAGAACTATGC
ATAGAGCAATTATTTTCAATTAATACAATTCGGGGTGATAGCTTCGTGATAAAATTGTAA
TTAATTAACTTCATAATTTTTTTTATTAATTATTTTGATGTATGTACATATTTATTAGTG
ACAATAAATTAATATCTTTAATTAAATATTTGTTGATTGCTAACATAGATTATTATTTAA
ATAAATTGTTTCAAATTTTATTTGCTACATACTATTCAATTAGGTCTATGATTCAATTAC
GTTTATGACGTATTTGATATGGGAATAAGTGTATTATCTATGGTGATAATAAAATGTCTT
TATTTATGTATCACTGTTATTTAAACATTTGTTCAAAGATTTTATGGCAGTAGTCAAATA
CAACAATTCAATTTTCAATACAAATTCTTTGATGCTAAAATAAATACATATAATGTAGGT
ACTACTAGGGGCGAGGCATATTTAGCGGAACAGTCAAACGCAACAGGTTCGAC
(2453 bp)

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