SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68975_c0_seq7
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_DNA_ligase_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006266 P DNA ligation
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0043596 C nuclear replication fork
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
GO:1903461 P Okazaki fragment processing involved in mitotic DNA replication
Transcript
Level		FPKM:21.94 TPM:38.26
ORF EntryO_BomoEE17477_complete:A_BomoEE_comp68975_c0_seq7
Sequence
(Nucleotide)
TTTCTTTTTTTTTTTTTTTAACATCAAAATAAGTCTTTTATTTTGTAAACATTATCTAAT
TTAAGCAGACACAATGGGGTATGTGAAGTAACTCAGTTCATGTTAGTTGGATGCGCTCAG
TAGAAGTCGTCTTCGTGAGCGGCGTCAGGTTGTTTGACTTGGTTCTTGATCTGGTCCTGC
GCCAGGTAGAGCTGCGCCACCTGCGCCGCCGTGGTGGCCTGCTCCGCCGCCTTGTCCTCC
CGCACCCGCACGAACCTGGGGAAGCGGAGTGACACGCCCTTGTGCGGGTGCAGGCGCGCG
ATGGCGGCGCGGTGCGCGGGCGAGAGGGACAGGTCTGCGCAGCGCACCTCCACCACCACG
GCGGCGCTGGTCCATACGTCGGCGGAGTGGGAGCTGTCGTAGTTGTAGTAGTTTCTCGGA
GAATCAATAATGTGTTCCTTCAGCATGTCGGACAAGGCCTGCAGGTCCTCATCGGAGAAG
CCGGTCCCCAGCTTGCACAGCGACTGGAACTGCTCGGACTCGGGGTCGTAGCACGCGACC
AGGAACCCTCCGTAGACGCCGGCGCGCTTGCCCTTGCCGCGGTAGGCTCCGATAATGACA
GCGTCCACCGTGTCTCCGACGCCTTCCAAGTAGTCTTTCTTCAACTTTAGCCAATTGTGT
GACCTCCTAGCTATATCATATTTCGAATTGTCACCAGTGAGCATCTTCACCATGAGTCCC
TCGCAGCTTTCTTTCACAGCTTCTTCAAGGAACAGCTGCACTTCCTCGATAGTGCTGCAG
TCTTTGGACGTGGCGAACTGCCATGTACCTGCAAGAGTATATATAGTTCAATGAGCCGCT
GCGTGGAGCCGGGCTCGTCGGCGCGGTGTCGGGGCGGAGGGCGCAGTC
(888 bp)

- SilkBase 1999-2023 -