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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68975_c0_seq5
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_ligase_1-like_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:22.47 TPM:39.18
ORF EntryO_BomoEE17476_complete:A_BomoEE_comp68975_c0_seq5
Sequence
(Nucleotide)
TTTCTTTTTTTTTTTTTTTAACATCAAAATAAGTCTTTTATTTTGTAAACATTATCTAAT
TTAAGCAGACACAATGGGGTATGTGAAGTAACTCAGTTCATGTTAGTTGGATGCGCTCAG
TAGAAGTCGTCTTCGTGAGCGGCGTCAGGTTGTTTGACTTGGTTCTTGATCTGGTCCTGC
GCCAGGTAGAGCTGCGCCACCTGCGCCGCCGTGGTGGCCTGCTCCGCCGCCTTGTCCTCC
CGCACCCGCACGAACCTGGGGAAGCGGAGTGACACGCCCTTGTGCGGGTGCAGGCGCGCG
ATGGCGGCGCGGTGCGCGGGCGAGAGGGACAGGTCTGCGCAGCGCACCTCCACCACCACG
GCGGCGCTGGTCCATACGTCGGCGGAGTGGGAGCTGTCGTAGTTGTAGTAGTTTCTCGGA
GAATCAATAATGTGTTCCTTCAGCATGTCGGACAAGGCCTGCAGGTCCTCATCGGAGAAG
CCGGTCCCCAGCTTGCACAGCGACTGGAACTGCTCGGACTCGGGGTCGTAGCACGCGACC
AGGAACCCTCCGTAGACGCCGGCGCGCTTGCCCTTGCCGCGGTAGGCTCCGATAATGACA
GCGTCCACCGTGTCTCCGACGCCTTCCAAGTAGTCTTTCTTCAACTTTAGCCAATTGTGT
GACCTCCTAGCTATATCATATTTCGAATTGTCACCAGTGAGCATCTTCACCATGAGTCCC
TCGCAGCTTTCTTTCACAGCTTCTTCAAGGAACAGCTGCACTTCCTCGATAGTGCTGCAG
TCTTTGGACGTGGCGAACTGCCATGTACCGGGCTGGGTGCGGAAGTGTTCCCGCAGCAGC
TTGCGGCGGTGCGCCAGCGTGCTGCCCACCAGCGGGGCGCCGTTGAGGTACAGCAGGTCG
AACACGAACACGCAGACCGGCACGCGCACGTCCTCCGCACTCGCGCACGCACGCTTGCGG
CTCGACAGCACCTGGAAGGGCAGCAGCTTGCCGTTGGCGGCGTCGAAGGCGACGGCCTCG
CAGTCCAGCACGCAGCTGGACACGCCCTCCTTGAGCAGCGTGGGCAGGCGACTCAGCACG
TCCGGGTACTTGGCGGTATTATTTTCTTGGTTCCTGCTGAATATGGCAGCGTTGGCGAAG
TCCGGCTTGTCGTCGGGCGCGGCGGGCACGTGGATCTGGGCACGCTCGCCGTCGTACTTG
TACTCGCAGGTGAACTCTTCATTCTCAAACCTGGCGAGCACGTCGCGCACGGCGCGGGTG
GGGTGCGCGAGCATGGGGCGCAGCGGCACGCCGACGCGCATGCTGCAGCGGGAGGCCAGC
GCCGCCACGCCGCCGCGCAGCAGCTCGTGCAGCAGCTCGGCCCAGTCGGGACACTCGCAG
TACGTGCGCCGCACCACCGCCACGTGCTGCTCCACCAGCGCCTTGAACTTGTCGGCGGAC
ATGTGCTGCGCCGCGTCGAGCTGCAGGTTGGGTCCGGGCGGCGTGGTGGCGACGGCCAGC
GCCAGCGCGTGCAGCACCGACTGCTCCGCCAGGCCGATGCGCAGCTTCCCCTCCAGGGAC
CTTATTAGGAATCGTGCTTCACAATCTCTGCAGGCGACATACAAGGACTGGATTTTATTT
ATTTTCTTATTCACTGATGCTTGACCAGTCATGTGAGCAATTTCTTTTAGTGCAGCAAAA
ACCTTTCTTATCTGAAGTTTAGGGGCCGCAAACATTGTCTTTTGTGCGGCTCGAGCCTGT
TCTGCCACTCTTCCCATATCCCCACACTTCTGTACTGCAGACTTCACTTGTGCTAGGGTA
CGGCCTGTACACTGGCCTATGGCTTTCATTAGGTACGTTTCTGCTATGCCAAGCTCCAAA
CTGTGGTATGCTGGTGCTAGTTGATTTAAGCACAAGTAAATACAAGGCAACAAGTCTTCT
GAAGTCAACACCATTACAGACCTATAAAAATTACTTAATATTTCTATTATCTTCAGTCGA
GCTGATGTTCCTTCTATAAGATCCAAAGTCTTAGCTAATGCAAGATACGGCACTGGGTCG
CCTTTAGACCAGCAAGCATCTTTTATAGGGTGGTATTTTGATTTTGATGGATTGTATGCA
TTTTCTGCTACTTTCTGTATTTCTTCACTCTCATTTTCAATATTATCAATATGCTCGGTA
TTTTTCACAATATTGTCTTTTTCCTTTGATCCAACAATCTTCAATTTTAAGCTGTTTTCT
TTTACCTCATCACGAGACAAACTCTTTGCACCCTTTTTAGGTGATGGGCTTTTGATTTCT
TTTTTTATTTTAGCTTTTTTATTTTTTGGTGAGTCATAAGTTTTGTTTACGCTCTTGTTT
AAAGTTATAGAGTCATCATTGTCTGAAAGGTCTTCCTTTTTCACTTTAACTGGAGATTCT
GATTCACTACTAGAGCTTATCACACGTTGTCGTTTAGCTTTATTTTTCGGTTTCAAAGAA
TCTTGGGAGTCACCGTCATTATCTATGCTGTTGGATTGTTGTCTTTCAGAAGGCTTGTCT
TTTTCGTCGGATATGGGTGATGTGTCCCCATTTACATGGCTTACTTTGGATCCACCATTA
CTTTTTATTTCCATAGGTGTAAATGGAGTTTTCTTGAAGAATGACGTGATACTCCTTTGA
GCCATGTTGTGACTGGTTTCCTGGTAAATTTTATTGTTATAGCAGATTGTACGGTTACTT
GTAATCTGTTTATATAACAAACAATAGCTAATTTTTACTAATCTATTTACGAATAAAGAT
TTAGTCAAATTCATTTACAAATCACGGTAATCACAGTATGAACCCGGTCACTTGACGACA
CCATACAGCTAGTTATTGTTTACTGGTTCCAGAAAAAATTGATTCCAATCACTATAATAT
TATGTTCTGGTTTTCAAAAAAACCTGATTTTACATGTTAACCCATAGATTATATACTTAA
TATATTTGTTTTAACCTACAGGAATATTTCAAAATTTTAACTTGCTGGATGTCGTATTGA
CAGTCATTAATTTGGCGCGGGAAACTTTATGCTTTTTAGCTTGGTCAGTTAAGCCAAGGT
ATCTTTTATCATTATCTTCACATTTGCGCCTGAACTATTTATTTCTGTCCTATATTTTAT
TTATTCCACTCATAACATAATTTAAT
(3146 bp)

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