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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68975_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_ligase_1-like_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:2.87 TPM:5.01
ORF EntryO_BomoEE17473_complete:A_BomoEE_comp68975_c0_seq1
Sequence
(Nucleotide)
TCTTTATTGGCGCGGCTTATACAAATAATATTGACAATAACTAAGAGACAATGTTCCAGA
ATATCCGCATTTATTTTTCTTGACGACTAAAGGTACGCGTCCATTTGTATGATTTTACAT
AGTGCTGCGTCCACTATCCGCGCCACCCACACTAGACGCACCGGCATTTATGAGCAAAAG
CACAAAAGCAAAATAAAATCCGTAGCATACGGTGCGTCCAGCGCAGCCAATGGATGCGTA
TCTTAAGCGGTACCGTAAACATTAATAACGTGCTTACCTGGGGAAGCGGAGTGACACGCC
CTTGTGCGGGTGCAGGCGCGCGATGGCGGCGCGGTGCGCGGGCGAGAGGGACAGGTCTGC
GCAGCGCACCTCCACCACCACGGCGGCGCTGGTCCATACGTCGGCGGAGTGGGAGCTGTC
GTAGTTGTAGTAGTTTCTCGGAGAATCAATAATGTGTTCCTTCAGCATGTCGGACAAGGC
CTGCAGGTCCTCATCGGAGAAGCCGGTCCCCAGCTTGCACAGCGACTGGAACTGCTCGGA
CTCGGGGTCGTAGCACGCGACCAGGAACCCTCCGTAGACGCCGGCGCGCTTGCCCTTGCC
GCGGTAGGCTCCGATAATGACAGCGTCCACCGTGTCTCCGACGCCTTCCAAGTAGTCTTT
CTTCAACTTTAGCCAATTGTGTGACCTCCTAGCTATATCATATTTCGAATTGTCACCAGT
GAGCATCTTCACCATGAGTCCCTCGCAGCTTTCTTTCACAGCTTCTTCAAGGAACAGCTG
CACTTCCTCGATAGTGCTGCAGTCTTTGGACGTGGCGAACTGCCATGTACCGGGCTGGGT
GCGGAAGTGTTCCCGCAGCAGCTTGCGGCGGTGCGCCAGCGTGCTGCCCACCAGCGGGGC
GCCGTTGAGGTACAGCAGGTCGAACACGAACACGCAGACCGGCACGCGCACGTCCTCCGC
ACTCGCGCACGCACGCTTGCGGCTCGACAGCACCTGGAAGGGCAGCAGCTTGCCGTTGGC
GGCGTCGAAGGCGACGGCCTCGCAGTCCAGCACGCAGCTGGACACGCCCTCCTTGAGCAG
CGTGGGCAGGCGACTCAGCACGTCCGGGTACTTGGCGGTATTATTTTCTTGGTTCCTGCT
GAATATGGCAGCGTTGGCGAAGTCCGGCTTGTCGTCGGGCGCGGCGGGCACGTGGATCTG
GGCACGCTCGCCGTCGTACTTGTACTCGCAGGTGAACTCTTCATTCTCAAACCTGGCGAG
CACGTCGCGCACGGCGCGGGTGGGGTGCGCGAGCATGGGGCGCAGCGGCACGCCGACGCG
CATGCTGCAGCGGGAGGCCAGCGCCGCCACGCCGCCGCGCAGCAGCTCGTGCAGCAGCTC
GGCCCAGTCGGGACACTCGCAGTACGTGCGCCGCACCACCGCCACGTGCTGCTCCACCAG
CGCCTTGAACTTGTCGGCGGACATGTGCTGCGCCGCGTCGAGCTGCAGGTTGGGTCCGGG
CGGCGTGGTGGCGACGGCCAGCGCCAGCGCGTGCAGCACCGACTGCTCCGCCAGGCCGAT
GCGCAGCTTCCCCTCCAGGGACCTTATTAGGAATCGTGCTTCACAATCTCTGCAGGCGAC
ATACAAGGACTGGATTTTATTTATTTTCTTATTCACTGATGCTTGACCAGTCATGTGAGC
AATTTCTTTTAGTGCAGCAAAAACCTTTCTTATCTGAAGTTTAGGGGCCGCAAACATTGT
CTTTTGTGCGGCTCGAGCCTGTTCTGCCACTCTTCCCATATCCCCACACTTCTGTACTGC
AGACTTCACTTGTGCTAGGGTACGGCCTGTACACTGGCCTATGGCTTTCATTAGGTACGT
TTCTGCTATGCCAAGCTCCAAACTGTGGTATGCTGGTGCTAGTTGATTTAAGCACAAGTA
AATACAAGGCAACAAGTCTTCTGAAGTCAACACCATTACAGACCTATAAAAATTACTTAA
TATTTCTATTATCTTCAGTCGAGCTGATGTTCCTTCTATAAGATCCAAAGTCTTAGCTAA
TGCAAGATACGGCACTGGGTCGCCTTTAGACCAGCAAGCATCTTTTATAGGGTGGTATTT
TGATTTTGATGGATTGTATGCATTTTCTGCTACTTTCTGTATTTCTTCACTCTCATTTTC
AATATTATCAATATGCTCGGTATTTTTCACAATATTGTCTTTTTCCTTTGATCCAACAAT
CTTCAATTTTAAGCTGTTTTCTTTTACCTCATCACGAGACAAACTCTTTGCACCCTTTTT
AGGTGATGGGCTTTTGATTTCTTTTTTTATTTTAGCTTTTTTATTTTTTGGTGAGTCATA
AGTTTTGTTTACGCTCTTGTTTAAAGTTATAGAGTCATCATTGTCTGAAAGGTCTTCCTT
TTTCACTTTAACTGGAGATTCTGATTCACTACTAGAGCTTATCACACGTTGTCGTTTAGC
TTTATTTTTCGGTTTCAAAGAATCTTGGGAGTCACCGTCATTATCTATGCTGTTGGATTG
TTGTCTTTCAGAAGGCTTGTCTTTTTCGTCGGATATGGGTGATGTGTCCCCATTTACATG
GCTTACTTTGGATCCACCATTACTTTTTATTTCCATAGGTGTAAATGGAGTTTTCTTGAA
GAATGACGTGATACTCCTTTGAGCCATGTTGTGACTGGTTTCCTGGTAAATTTTATTGTT
ATAGCAGATTGTACGGTTACTTGTAATCTGTTTATATAACAAACAATAGCTAATTTTTAC
TAATCTATTTACGAATAAAGATTTAGTCAAATTCATTTACAAATCACGGTAATCACAGTA
TGAACCCGGTCACTTGACGACACCATACAGCTAGTTATTGTTTACTGGTTCCAGAAAAAA
TTGATTCCAATCACTATAATATTATGTTCTGGTTTTCAAAAAAACCTGATTTTACATGTT
AACCCATAGATTATATACTTAATATATTTGTTTTAACCTACAGGAATATTTCAAAATTTT
AACTTGCTGGATGTCGTATTGACAGTCATTAATTTGGCGCGGGAAACTTTATGCTTTTTA
GCTTGGTCAGTTAAGCCAAGGTATCTTTTATCATTATCTTCACATTTGCGCCTGAACTAT
TTATTTCTGTCCTATATTTTATTTATTCCACTCATAACATAATTTAAT
(3168 bp)

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