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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68973_c0_seq3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		Luc7-like_protein_3_[Papilio_xuthus]
Ontology
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:16.70 TPM:29.13
ORF EntryO_BomoEE17467_complete:A_BomoEE_comp68973_c0_seq3
Sequence
(Nucleotide)
AATATCTATGGGTCCAACTAAAAAATGTCTTTGGTCTTCCTTTCTTTCCATTCCAAACAT
TTCTCGTTTTTTATTTGATGTTAAATGTGATGAGAAATTAATACGTTTTGATTCGTATTG
GCAACTAGTTTTATTTAAACTAATTAAGATTTTTATACTCCATAGTTTAATGTATTATTG
TTGTGTCTGAAGTTCTAGAAAGCGTTAAAAAGTAGGATGGCGGTGCTAGCGGCAGCACAA
CTCCTAGATGAATTGATGGGCAGGCACCGGAACACCGATCCCAACGAAAAAATTAAAAAG
CCTAATTGGGAAGATCCTGAGTACTGCAAATACTACATGGTAAAGTTCTGTCCGCATGAT
CTGTTCGTTAATACTAGAGCTGATCTTGGTGCTTGTCCTAAAGTCCACGATGAAGAAGTC
AAAGAGCTTTTTGAGAAAGCCGACCCATCGTATAAGAAGTCTCAGTATGTCGAAGAGTTT
CTACGGTTCTGTAAACATATGATTAATGATGTAGAAAGGAAAATACAAAAAGGAAAACAA
AGATTGGATCTAATGAACTCAAAACCAGAGGGCCCACCAATGACTCAAGCACAGACTGAG
AAGAATCAGGAACAGGTTTCGTTGCTGTCTGAAAAAATTACGGGCTTGGTACAAGAAGCT
GAAGAAGCGGGTATAAGAGGAGATGTAGAGCAAGCCCAGGGTTTGATGAAGCTTTGTGAC
AGGCTCAAGGAAGAAAAAGAACAGCTGCTTAAACAACAAGAAAATAGCCATTGGTCTATG
ACAGCTGAACTAGCAGCTGCTCAGGAGAAACAAATGGAAGTCTGCCCTGTATGCGGAGCC
TTTCTTATTGTTGGCGACGCTCAACAGAGAATCGATGATCACTTGTCTGGGAAACAGCAT
GTTGGATACTTCAAACTTCGCCAAGCTTACGAAGACATGACCGAAGCTCGTGAGAAAGAA
CAACAAGAAAAAGAGAAGAGGCGTCGTGAAGAGAGGGAAAGAGAAAGAAACACTCGTTCT
GGAGGACTCGGATCCGATCGCCGTGATCGAGAACGCATGGAACGCGATCGAGAGCGGGAG
CGAGACCGCGGCGACCAACGTAGTGACCAACGGGGAGAACGCGGTGAACAACGCGGAGGA
GAACGCGGCGATCGCGTCGAACGAAGCGAGAGAGGCGAGAGGGAACGGGACAGAGAACGT
GAGAGGGACCGACATCGCGATCGATCAAGTCGAGACGAGCGAGGCGGCCGCCACGAAGAG
CGGGATCGGGACCGTGAACGTGATCGCGACCGGGAACGAAAACATCGTAAAGAAAGAAGG
TCGTCTCACGAGCGCTCCCGTCGTCGATCTCGAGATCGCCACTAGCACTTGACTGAGGTA
TCACAAAAGCACCTCGATCCGGTAAGTATAATAAATCAATTTAACAGTACGCGACGTCCG
GATACGACACACAATCAATCCATCTTATGCCATACAGTCCGATTATTTTTTTATCACTCA
TGTTTTTTTTTTCTTTTTCTTTTATTTCAACATCCGCCGACTGTTAATACAATAAGTAAT
AAAGTGAACAATGTTGTTTTGCAGCTTAATGTGTAGCATACCAAAATATAACTTCGGTAT
ATGGCATACATATCGGGAATAAATGACCCCGTTGCACTCTCTGTAACGTAGTTGTCGTCA
CACCGGCGGACATGGCAGGTATTTGATTGGTATTTTGAATAGTTTCCGAGAGCCGAGAGC
TAGAGAACTTATTTGTTAATCGTTGTTCGCGTGTGCCACGGAGGCAACGAACGATTTACG
AATAAGATCTTCTCAGCCGTGTGCAGGTCGCTTCGTTGTCGTTATTTATTTTTGAGGTAT
ATCAGCGTGTCGTGTTTCGTCGTCGCGAGTGAGAGTCGTCTGGCGCCCGTCGCTAATGCG
ATGCCAGGTATTTGTTAGGGTACTTGTGTCCAACAATGAAGACAATTAATTCTATTCTGA
AATAGGGTCCAATTTTATTCCATACCGAACATTTTTATGATATGAATACATCTAATGGCG
ACCATAAATTGATATAGGTAATACCTATATATTGTAGGTACTTAAAGTTAAATATAATTT
TAAAAAATCGCTCAAATTATCCCACTAACGAGGAAAAAACAAATGCTCATGCCATTCTCA
ATATATTTCTGAAATACATGAAACTTTGTTCTAATACTTGAAAAGTCCAAAATATTTCTT
AATTTAAACACTATAACATAGAAAATTACCATAAAACTGCCATTTAAAGGAGTCTTGAAG
AGCGCACTGTTGTGCTTCTTTCACAATATTGGATGCTGTGTTCACATCTACCATGTATTT
CCAGGTACCCAAATATAGTGATGTCATATTTCTATAAAATTACATAGCATGAATGAATCA
ATAATCAAATATTCTTTAAATTGCAAGAACCGAAATATGACGTCATAATACTGAACTAAT
AATAACCCCAATCCCAAAGTGGAAATGAAAAATCAATGATTAACAAGTTAAGTCCACTGA
TTACAAATATATATATATATATTTATGGAGCCCTCTCTGGGGTTAATTTCATTGATTGAT
CAGTTCCACATTAGCTCTACTCAAGCTACCTTTACTAGCTTCCTCCATGGACTTTTCAGT
GGGGAAAATATGAAGGAAGATGGCCGGCTTCTCGGAGAGGACCACAGACAATGAGGTACT
TATGAAATTAAGACACCCCCGCGAAGAGTTCAACCAGTGCAGTAATCGACCATCTGTCTC
GAGGTGACCTAGGATAGTCATATTATAATAATTATAAGATAATTTCGATGTTAGTGAACC
TTCCAAACATTAGATGCAATGCATGTCGTCTATATTCAGATGGGCACTTTAATCCGCCTC
TTCCACACTTCTTTTCAAACAAGATTATGTAGCTGTTAATTTTTTTAAATCCTCTATTGA
AGTGTGTAAGAAGTGAAGATTTAGATTATTGTCTATAAATAATGTAAACATGTAGCTACC
TCTGCAAATTGTTCGATCCCTAGGATGGTCACTCATTCCTAAAACGAGTCTCCAATGAGG
AGTGTTTCAGGTATTTATGACATTTTTATTTCATCCTAATGTTTGTTAATTCTTTTCTTT
GGATAGTAAAGTGTGAGTAGGACTAATTTCAAACAAATAAAAG
(3163 bp)

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