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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68868_c0_seq2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_putative_tRNA_pseudouridine_synthase_Pus10_[Papilio_polytes]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008033 P tRNA processing
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:24.11 TPM:42.04
ORF EntryO_BomoEE17171_complete:A_BomoEE_comp68868_c0_seq2
Sequence
(Nucleotide)
GGATACATTTGCCTGCTGAATAAAGAATTTGTTTTCTTTTTATGTTTAAATTAGGGCAAA
ATTTATTTTAAACAAAACTAAAATAAACTAATAAAATTTGAATATATACAGAATTCAAAC
TCATGCAACTCCTGACACTGTTGAGTTGTTCTCTTCTTTCGTAACTGCAGAATTTTTATA
CTTAAAACTGAACTACAAAAAAAATTGGAAAGTGATATTCATTTGTTTACTATACTTCGT
TACATGCTTTTTAGCAGTGTAAAATAAAAGGAAGATGGACAATAAAGCCATCGTTAAATT
CTGTAAAGAGGTAGGGTGTTGCGATATATGCTGCCTGCGTTATTTAGGGCTTAAGAACCC
GGCAACTTACGAAAACTACAAAGAATACATACATAAATATACAGAAAGCGGTGTAGAAGT
AGAAAATAATTCAGAAGAACAACAAATCACTAGCAATCCAGTAGACAATATAAATGGCAA
TAAAGATGTCAATGGCTGTGATGATGAACCACCGAAAAAGAAAAAGAAGATATCGATATG
CGTAAGCTGTTTAGGTATACTCCAGGAAGAGAACTGGTCTGAATGCTTTAATATGGTCAA
AGAGACTTTGGAGAAAAAACGTTACGAATGCTCAACTTTTGCATGTGCACTCTCTGCTCC
GATCGCTACATTATTACGAGATAAAGCCATAATCCTACACCTGAGTGATGCCTTTAAAGA
TTATAAAGAAGATACCTTAACACCACTGAAGGAAGCATGGAAATGGACGTTTGGTGTCAA
ACTTGCCGAACAAATAGGTATGACACTAGATTCCGGAGCCATTTCACCGTTACTGATTAC
ACTTAATATGGAGTATCCTGATGAACCACAGGAACTAGAAATCTTAAAGAAATTATCACC
ATCATTGTTCCAAGAGAGACAGAAGCAGAGAAGGAGGTTCACGGTTGAGTTTACCCGGCC
ATCAGTAGAACAGGCCATGGACAAGATTAGTCTTGAGCAGTTGAAGGGTGTCGATAAGTG
GAATAAAATTCCATCGGTGGACATTGAAGCTAAGTGTGTCAGTGCTATGTGCGTGCATGC
CCCTTCTTATCTGGGGGGTAGGTATATAAAATTGAGCAGAGAGCTTCCGCAGACGCCCTG
GCTGATCAAGGGCAAGAGGATGATGGAATCATCCGTCCAGGAGATCTTATTCGAACCCAT
AGCAAAAGTATTTGACTTGACACCTGAAGACGTGGACCACAGATTGAAGTTCATGTCGGC
TGGACGCGAAGACGTGGACGTGAGGTGTCTCGGTGATGGTAGACCCTTCGCTATCGAAAT
CACAGACCCGAGAAGAGACCTCACCGGTGACGAGCTGAAGAGGGTCTGCAAGGAGATTTC
GAAAGGTGGCCAAGTGATCGTTCAGAAACTAATGCATGTCTCCAGGAACGAGTTGTCGGA
ACTTAAAAAGGGGGAAGAGACGAAATGCAAGACTTACGAAGCTCTGTGCATAAAGCTCGG
AAATGAGAACGCTGAACCGAATATTCTGAATGGAAAAACGCCTGTCGCCGTCACCGAGGA
GGACATCCAGAGGATAAACGAGTACAGGAACACCGAGGCAGGGGACGAGGCCAGGATCGT
GGTGAAACAGAGAACCCCGATCCGAGTGCTGCACAGGCGCCCGCTGCTCACCAGGACCCG
GAGGATATATGACGTAGTGGCCAGGAGGGTGCCTGACTACCCGCAATTGTTCACCCTCAC
AATCCGCACGGAAGCGGGCACGTACGTGAAGGAGTGGTGCCACGGGGAGTTCGGTCGCAC
CACGCCGAGCCTCCGCGACGCCGCGGGCTTCCGGGCCGACATACTGGCGCTCGACGTCAC
CGCGGTGCTGCTCGACTGGCCGCGACCCCAATAAATGATTCGATTTGGACACTGAAGCTC
ACGGACGCCAACAATGCCACGGAAACACCGGAAACAAGTTCATTCCAATGAATGACTCAG
TGACGCGGTAGTCATCGCTGCTGACTATGGGGCCGAGTGTTGGGGGTTCGATTGATGATC
TTGTGATGATTTATTTGCTTTTTACCCGTACGGTGTTGAATATTTATACGTGTATTTATT
TGAAATTAAGCATTTAAATTCTTCTTTATCTCCACCTTATCCTACTAGGTGGGGTCGATA
CAGCGAATTTTTCTCTTCCATTCTCTTCT
(2189 bp)

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