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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68851_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_COPII_coat_assembly_protein_SEC16_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003680 F minor groove of adenine-thymine-rich DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007455 P eye-antennal disc morphogenesis
GO:0007478 P leg disc morphogenesis
GO:0007548 P sex differentiation
GO:0046660 P female sex differentiation
GO:0048070 P regulation of developmental pigmentation
GO:0048071 P sex-specific pigmentation
GO:0048086 P negative regulation of developmental pigmentation
GO:0048092 P negative regulation of male pigmentation
Transcript
Level		FPKM:10.35 TPM:18.05
ORF EntryO_BomoEE17147_complete:A_BomoEE_comp68851_c0_seq1
Sequence
(Nucleotide)
GTTGAACATTCTGCTGTATGCCCAGCACTTAACACCAGTCGCTCTTTGAACTCGTCTTTT
GACTTTTGCAAAAAAATATCGAACTGTAGGTAATCTTTGGCTTCAGAGCGCGCTGTGGTT
CATCAGCATTTATTACAATGTCTACAGCTGATTTGCTTATTTATGATCTATAATAGTCGC
ACAATTGCAACTATTGTGAAAGGTCATCCTTACACATACATTTATTTATTTTTTGGTCTA
GGTGGACAAATAACTATATACATAAAAATATAATCCCTACTATAAATTTGCTTGCAGTAC
TTACGTGATGTCAAACTTCCTTGAATAAGTCAGTGGAATCCCTAAATTAGAAAAAAAGGA
TACCAAATAAAAACAATGAAATATGTGCTATATAATATACTATATCTGATAGTTGCAACA
GCTCAAGAGAGTCTGGATCGTAAACTTCCATGTTCTGATCTAATATCATATATTATGATA
TATTTTTATTATCAGTAGCTTAGTAGTACTTCAACGTTTACGAACATCGGTAACCATTCA
CCTTCAGGTAGGCTGCATGCTCTTCTGTCATCTGCCACTGACAATAAACTAAGTGTAGGT
ACAATGTTACCGTGATATTACTTCGACCGAAGTCAATACTGATTAAAATAGAAATACAAA
GGCATTTCGATATTATTAAACCTTTAATTGTATTTATAACATTATATTATATGTAAATAT
AAGTGATCTTAGTTTTAATATATAGAAACGAGACGAAAATGCCCGCTATAATATAACTTA
GGTTTATAGACACGATGTAGATACTAAATATTTAAAGTACATACGATATCTTCAATTCAC
AACTTAAATATTAAAAGAAGAATAAAAGTGCACTTAAAATGATCAAATGTTTTGTTTACT
TAACAAATAACATCACACTTAATAAATGTATTTATAGGCACAATAGTGGACATTTAATCA
TAATAATATAATAAAAATATAACATATCGATTCAACAAAACTGAGGTATATTATGAAAAC
GATATAACGGGTACAAATGGGTTTTCTACTTTTAGTAACGCCACTTACACTGACATAAAA
TCCTAAAGAATATAATATTTAGTAGATTCCTCTGTGAGCGCATCGATCTAAAACACGAAT
GTGCATCATTACTACTGGAATGTCCTACGCACATAATGTCTTACAATGACGAAACAAAGG
CACAAATTAGTGAGACCTAAACGTGTAGCTTCTACACACTCAACACGTGAGTTTCATCTT
AGTAAATTATAGAGTTACGTATGCAAATACCAACTAGGGTAATTCTAGTACATTATCGTA
TCTATGGCATTTTCAAATTAGACTAAAATAATCAGTCTTCCAATCAATTACAAAATAATA
AGTATTCGCTTAGGATTACGATAAAATTATTAAATATACATTTAATTCAGAAATTAATAT
TACTGTAGATACGTATGCTATTAGTACATCTGAACACAATTTAATATTAAATCATATAAT
TCCAAATCAATTTTATCTGAAAATTTGATATGATCTGATTTTTTAATTGTTTTTTTTTAT
ATATAAAATATGAGAAAACAATTATTAGTAAATATGTAGGTTTATGTGTATTATAAGTTT
TTTTTTTTTGTTAAATTATCCTATAAAATACTACCTACTCACATAAAAGACGTTGAGCAC
TATTATCTAAGTGTTGACAAAATCACTTATATCTAACAAGAACCACCGTGCTTGTGCAAA
CAATTACAAACTACCGATGACAGTGAACACAACAAGGTATCGATCAACAATGAATATTAA
TTATGGCATTCTATACAAAAATAAATAAATCTAACCCGTAACTCAAGGAATTATAATTAT
TTCGTTCTGTACCTATAGGTCGCCATCCGCGATTATACAGAAATACTCGTAAACGTCGCA
CACACGGCTAAATAGTTTTCCGTCCGATCGAAGAGATCGCAAGTTTGCTAACGGAACAGT
TTAAATAATATGGCAATTATTGCGACGCTGGACTAGAGTTGAGCTGTAGCTAGCGTGAGG
TAGTAGCGGCGTTTCAGTCTATAAACATCACAGTCGCGGACAACAAATTGCACAATAACT
CGTCTAGGCGAACCCGCCTCAGGCGCGATGGCGTGGCCGGCACTGCCCTTCGGCCCTATG
ATGTTCCCGGTCCAACTAAAATTATTAAAAGCTAATTAAAGCTATCCTAATCTGCTATTT
ATTAACAAAGACGTAAACGTTATAAAACATAATAATCAAAGAAGAAATATAAACAAAAAT
AAAAATCACAATAACGCATCCTCGACCTTGTAACGGAAATTTTATTTCATTATCAGGCTC
GGATGTCGTTTCGAAATAAATAGAGAAGAAATAAACAGGTAGTATGAAAGTGGCCGCGGG
GCCCATTGCAATAGCCCGGCCGGAGCGCCCGGTCAGTGAGGAGTGCGCACGCGGCGCGTC
CTACTAGTAGCCTACCAATAATGCCTTACGTCTATCTTTGTACGCCTAAGTCAGTCAGTC
TTGATGTCTATGTCTATGAATCTCTCAATCTCTTTCACTACTACAATCTAAAGCAAAGTT
CCGTGGCGGCACGATTACACCTGTAGGTGGGTCTAGATCGCGGCGACGAGAGACTGATAG
GTCTTCTACATGATCATCATCAGGCGGAGGTGTACGGGGCGACTGTGGTGGAGACCGTGG
TGGCGTACGAGGAGCTAAAGCTGCATGTGCCGCAGCAGCCAAAGCCATGGCATGTAATGC
TTCTCGACCCCCGTCTCTTGTAGCTCCTTCCAAAGCTTGTTGCAGAAACGATGGGTCTAT
CAATGGTGTGGTAGGATTGCCTTCATCATTCCCTCCAGCTCCAGTTAGTCCATAAGGAAA
AGCAGCTCCATTGGGTTCTCTCTTGACCCCGCGACTCATTGGTCGACTCGTTGTAATGCC
AAGTTTCTTCACTTTATCATACAACGTACGTGAAGGAACGCCGTATTTGCGCGACGCTTG
CAGAGCGCTCATACCGTTTCTCACACATTCTATGGCGGACAAAATGTCAGATCTTGTATA
TTGTTTGTATCTTTTCCATTCGGGTTTTTGTTGTGGCGGGACATATGGTGCTAGCCCAGC
TCGGACATCATGTTGAAAATTGGTCGGTGGTGGAGACGGATGGAAATTTCGTGGGGTTTC
CTCTTCAAATGAACGTTCAGTATATGGAGAGTGTGCATCTTCAGAACGATCTGATCGATG
AAAATGAGGCGATGAAGCACGAGACGATAATCTACGTGGGCGGTAATCGAAGGGTCTTTG
GGGACTGGAAGCTCTGTCAGTTTCATGTGCTGACCCATTGGAGTGCAAACGTGGCGGAAC
ACTTTGCTGATTGACAGGGTGACATACTAATGAAATAGGCTGCGATGAATCTACAGGGGA
ATTCTGAGCAAGCACGTTTCTTAAGATAGGGGTGTCCCGAGTGGCTAACATACTCGATAG
TTTCTTCCGTTTGAGCGGGTTCATATCAACCGAGTCGTACGCAGCAGAAAGCACGGGGGC
AGTAGGTGGCGGCGGCCATCTCGAGGGTGGTGCAGGTGCCGGTGGTGATAAGCTGGAAGG
AGCAGCGGGTACAACTCGAGGCGGCGAAGCGCCAGGAGTCCGTTCTGTGTTGCCGGGCTG
CCTACGCAATTCCGTCATGTCGAAAAGACCCTTGACTTCAAGTTGTTCAGCGACTTTCAT
TATTCGAGGGATATGGGCTTGTGTAACATTAACTTCACCCGTGTACATATATTCAAGGAG
CGCTCTCATTTCGAAATCCTTAACCCCCGGAAACAGAATACTGCAATGATCCATGGGCAC
ATCGGCTAATATGGATTGGAAATACGGGGAGTTAGCGGCGAGGACAACTCGATGCGCTTT
AAATGTTACTTGGTCATCGACCACAAGCGTACAGTCCACATATGTTTCCCCTTTTATCAG
AGCCTCTAGGATTTCTACTAAGTTCGTCTTGTGATGATTCCATTTTAAACAGAAAGTTTG
TTGACCTTCGTTACTCTCCATTTTTCTCAATTGCGCTTCATAAAAACAGAATCCGTGCAC
CTATACTGCTAATGAGATACGAATGTACATGTATAGATGAGTCATATGAAAATGTTTGCA
CTGTCACTAGAAAGTTTTAATCACGTTCGGGGTTGTTTCGCGTTAATAGTGGTTTCGCCC
TGAATGTGTGGGGGCGGCGTGCTCTCGCGAGCGGCTGGCGATGACTGTGTGTGTCTGGTG
GCTGCCGCGCTGGGTCGCGGGCCCGCCAACGCCGCGCCCCGCGCCTCTTGCGTGCGCTTT
TTACGCACGTAGCGCAGCGCAGAGCGGAGTGCAGTGCAATTGCGTGCGGGCGAGAGGGCG
CGGGGCGGTCCGCTCCCGACGAATTGCAGCGCGGTGAGGAGGGTTTGCGGCTCTGTGTGC
GTGAGTGCGCACGCGCATATTACGTGCACGTTGTTGTTGTGTGCACCGCGAACAACTCGA
TAGCACAGAGCCCGCTCTACAGAATAAAGTATTTAAAGTATAATTTTACTTAAAACTTCA
GCCGCACCTCACCAGAGTTTTAAGTTTAGTTTCCTACTCAAAAAATGAAACGCATGACTT
GGTTAAGCTTTATAAGGATTATTAATGTTAGCTTAGTCTATTAAAAAAGTATGTTATGAG
TTCATGTTACTCCGTGTGCTTTTTGGACACTATTTGCGACGCTTTTTAGTACTGAAAAAA
GCAAAATATTTCCATCAAAATTACTTTAGTTGAGTACATCTAAGGTACCTAGATCCCTTA
TTAAAAATTCAAATATTTAAAGCTATAAAATGTTGCAATAGTCGTGCTTGCATTAGCTTT
GCGAAACGTAGTGTTAAATTTGTCTATTCACATCCGCAATTTTTTAACTTAACGACTTAG
TTAATTACATTACTTTATTTGTCTATGCAATATGCATATCGCCCTAAAATTCCCAAAACT
GCGTGAACAACGCCGACAAACGGGGTCATTGACACATTACCCGCGGAGGGAACGCCAAAA
TAGCGCGAAATGCACTCAAAAATAGAACATGATGTGTGTGCAATATTTTTTCTAAGATGG
AGAATGACTTCCGTTCCGTTGAAAACAAACCAATTTACTTATTTAAATAACAACTACAAT
TTGTCTCAAATATATGTATATTAACAAAAATGATCAAATCAATTACCTACAATTTGTATT
ATATTTTTCGGAGGAAGTGCATACGTCTATCCTTAGGGACACACAATACATCTTTAATAA
AACCAATTCAGTGACCCCGTTATCAGTGCGATAAAGTGGCCAGGGATATGTCTGAAGGTT
TAAGTAGACTCTTAACAAGACGACAAAAAATACATATATCAAAAATGTTATAATAAACAA
TTTTAAATATAACGAAGCTCGCGAATTCCTGAAAAAATTCTGATATGTAGAGAATAACAT
TTATCCTAAAGTAGCGCGGTAAAGTATACCTAAGATTCAGCAAAAACGTCTTTATGGTGA
AATTACTCATAGGTACTAAATTAATGGACGAAACGCAGAT
(5560 bp)

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