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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68835_c1_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_developmental_protein_eyes_absent_[Bombyx_mori]
Ontology
GO:0001744 P insect visual primordium formation
GO:0001746 P Bolwig's organ morphogenesis
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006470 P protein dephosphorylation
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007283 P spermatogenesis
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0007435 P salivary gland morphogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007498 P mesoderm development
GO:0007526 P larval somatic muscle development
GO:0008134 F transcription factor binding
GO:0008406 P gonad development
GO:0008584 P male gonad development
GO:0009416 P response to light stimulus
GO:0009996 P negative regulation of cell fate specification
GO:0010628 P positive regulation of gene expression
GO:0016787 F hydrolase activity
GO:0030707 P ovarian follicle cell development
GO:0030946 F protein tyrosine phosphatase activity, metal-dependent
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042051 P compound eye photoreceptor development
GO:0042675 P compound eye cone cell differentiation
GO:0045087 P innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0070285 P pigment cell development
GO:0072499 P photoreceptor cell axon guidance
Transcript
Level		FPKM:1.81 TPM:3.16
ORF EntryO_BomoEE17122_complete:A_BomoEE_comp68835_c1_seq2
Sequence
(Nucleotide)
TTAAAATTTCAAACATCTGATCAAACTTTTAGAAAACAAAATAAGCAGATACTTTTATTT
ATTATTATAAAAAAATAGTATACATATATGTAGCTGCATCCATATTACGGTGTTTTAAGT
TTATTTACAAAGTTTACGTAACATTCCAACATTGGAGTTCCTTGACTCCTTTAATTACGG
AAATGGACAAGGAAAATATGAATATGAACTCAAATAAGCGTAGGAAACTTACTGAAGATG
ATTCGAGTGATCACTACGAGAACATAGATGATAATTCGGATTACTGGCCCGAGTCGGAGA
GCGGAGATGATTCACCATCATCAATGTTGCCATCAATTAATGATACGAGTCCATTATCTC
CGATTAAAGCTGAAGTACACGCGGCCAGCAGAAGATGTAGAGAGAATTCTGGGGAAAGCA
CAGCTAGTAGGTCTCGAGGTCGAGGACGCAGGAACACCTCATCATCGCCAGCCCAGCACG
TCCCAGAGCCAGCCACAGACAGAGTCTTCATATGGGATTTGGACGAGACTATAATTATAT
TCCATTCGTTGCTCACTGGAACTTATGCTACTAAGTACAATAAGGATACGCAACAGATAG
TGCAATTAGGATTTAGGATGGAAGAAATGATATTCAGCTTGGCTGATACACATTTCTTTT
TCAATGATGTTGAGGATTGCGACCAGGAGCACATAGACGCGGTATCGGCCGATGATAATG
GCCAGGATCTCTCTGCGTACAACTTCACAACGGATGGGTTTCATGCGGGCGCGGCGGGAG
GCGCTCTGTGTGCGCCTGGGGTGCGAGGCGGAGTCGACTGGATGAGGAAACTAGCCTTCC
GGTACAGGAAGATCAAAGACACCTACAATAATTACAGGAATAGTGTTGGAGGGCTCCTAG
GGCCAGCGAAGAGAGAACAGTGGTTACAGTTGAGAGCAGAACTTGAACAGGCCACGGATA
ACTGGTTAACATTAGCCTGCAAGTGTCTGAATATGATTAATTCTCGAGAGAACTGCGTGA
ATGTTTTAGTGACGACGACTCAGCTCGTCCCGGCTTTGGCTAAAGTCCTGCTCTTCGGTT
TAGGGGGCGTGTTTCCTATCGAAAATATATACTCCGCCACGAAAACGGGTAAGGAGACTT
GCTTTGAGAAAATTAAGCAGCGCTTCGGCGAGCGGTGCACGTACGTCGTCATAGGGGACG
GCCAGGACGAGGAGGCCGCCGCCAAGGCCAAGAACTACCCTTTCTGGAGGGTGTCGAGCC
ACTCCGACATCGCGGCGCTGTACAACGCGCTCGACATGGGCTTCTTATGATCTGCTGCTG
CCCTGGTACCCGATACCTCCAATTTCACGCAACGAAAAACAACGGAACGTGTCAGCTCTT
ACGGCTCATGTACTCCTGGTACATAGATAATTGTGTTTTATGTGTCGTCAATTGAAATGT
CCTTTGTTTTGCGTTTTTATACCCGATTTATACCGGATATATATATTTTATACCGGAACC
GAAACTTCTTTTGCGATGCGTATTAATGTGGTTTTCACACCAAGTTTCACCAAGTTGCAC
GCGCACCATTT
(1571 bp)

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