SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68835_c1_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_developmental_protein_eyes_absent_[Bombyx_mori]
Ontology
GO:0001744 P insect visual primordium formation
GO:0001746 P Bolwig's organ morphogenesis
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006470 P protein dephosphorylation
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007283 P spermatogenesis
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0007435 P salivary gland morphogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007498 P mesoderm development
GO:0007526 P larval somatic muscle development
GO:0008134 F transcription factor binding
GO:0008406 P gonad development
GO:0008584 P male gonad development
GO:0009416 P response to light stimulus
GO:0009996 P negative regulation of cell fate specification
GO:0010628 P positive regulation of gene expression
GO:0016787 F hydrolase activity
GO:0030707 P ovarian follicle cell development
GO:0030946 F protein tyrosine phosphatase activity, metal-dependent
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042051 P compound eye photoreceptor development
GO:0042675 P compound eye cone cell differentiation
GO:0045087 P innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0070285 P pigment cell development
GO:0072499 P photoreceptor cell axon guidance
Transcript
Level		FPKM:0.27 TPM:0.47
ORF EntryO_BomoEE17121_5prime_partial:A_BomoEE_comp68835_c1_seq1
Sequence
(Nucleotide)
GTGGGAAGTGTGCCCGCCACAGGATTCGGCACTCAACCCTCGCCGTACGCATACTCTTCA
TACAACGGAGGACTATCGCAAACCTTCACTCCTACACAACAAGATTATAGTAATTATGCA
GCCGGCTACGCGGAACACAATGTTGCTCAGTACAGTGGCTATTACGCAGCACCCAGCTAT
TCACCTTATGTCAGTTCGCCAAGCAGTAGTGGGAGCGCCGGTCACACTTCATACCATCTC
GGAGGAGCATTGTCAGATTCACCATCATCAATGTTGCCATCAATTAATGATACGAGTCCA
TTATCTCCGATTAAAGCTGAAGTACACGCGGCCAGCAGAAGATGTAGAGAGAATTCTGGG
GAAAGCACAGCTAGTAGGTCTCGAGGTCGAGGACGCAGGAACACCTCATCATCGCCAGCC
CAGCACGTCCCAGAGCCAGCCACAGACAGAGTCTTCATATGGGATTTGGACGAGACTATA
ATTATATTCCATTCGTTGCTCACTGGAACTTATGCTACTAAGTACAATAAGGATACGCAA
CAGATAGTGCAATTAGGATTTAGGATGGAAGAAATGATATTCAGCTTGGCTGATACACAT
TTCTTTTTCAATGATGTTGAGGATTGCGACCAGGAGCACATAGACGCGGTATCGGCCGAT
GATAATGGCCAGGATCTCTCTGCGTACAACTTCACAACGGATGGGTTTCATGCGGGCGCG
GCGGGAGGCGCTCTGTGTGCGCCTGGGGTGCGAGGCGGAGTCGACTGGATGAGGAAACTA
GCCTTCCGGTACAGGAAGATCAAAGACACCTACAATAATTACAGGAATAGTGTTGGAGGG
CTCCTAGGGCCAGCGAAGAGAGAACAGTGGTTACAGTTGAGAGCAGAACTTGAACAGGCC
ACGGATAACTGGTTAACATTAGCCTGCAAGTGTCTGAATATGATTAATTCTCGAGAGAAC
TGCGTGAATGTTTTAGTGACGACGACTCAGCTCGTCCCGGCTTTGGCTAAAGTCCTGCTC
TTCGGTTTAGGGGGCGTGTTTCCTATCGAAAATATATACTCCGCCACGAAAACGGGTAAG
GAGACTTGCTTTGAGAAAATTAAGCAGCGCTTCGGCGAGCGGTGCACGTACGTCGTCATA
GGGGACGGCCAGGACGAGGAGGCCGCCGCCAAGGCCAAGAACTACCCTTTCTGGAGGGTG
TCGAGCCACTCCGACATCGCGGCGCTGTACAACGCGCTCGACATGGGCTTCTTATGATCT
GCTGCTGCCCTGGTACCCGATACCTCCAATTTCACGCAACGAAAAACAACGGAACGTGTC
AGCTCTTACGGCTCATGTACTCCTGGTACATAGATAATTGTGTTTTATGTGTCGTCAATT
GAAATGTCCTTTGTTTTGCGTTTTTATACCCGATTTATACCGGATATATATATTTTATAC
CGGAACCGAAACTTCTTTTGCGATGCGTATTAATGTGGTTTTCACACCAAGTTTCACCAA
GTTGCACGCGCACCATTT
(1518 bp)

- SilkBase 1999-2023 -