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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68822_c0_seq6
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_flap_endonuclease_GEN_isoform_X1_[Bombyx_mori]
Ontology
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.04 TPM:3.55
ORF EntryO_BomoEE17104_complete:A_BomoEE_comp68822_c0_seq6
Sequence
(Nucleotide)
ATCACATCCAAATTATGTATGTACGATGCATGTAGTTAATAAATAGTAACTCTATGGTAC
GATGATATGACGGCAATATTGGCAATTCTTGAATATTTAGTGTATTATCTAATATTATCT
ATGATGGCAATATTGAAATTGTCGTTGTATGATTAGGTTTAAAAATTCAAAATAAATGGT
TATTTTTCTGCGAAAGTCAAAATATCATATAAACAATATAAGAATAAAACTGAAATATTA
AGTGTAACGTCTATGATTATATGTAATACGATTTACTAACTACAAAGTTCATAAATTGCG
ATATATATCCAGCAAAAATAGCAGTAGCTGTTACATCAATAAATAATCACACAAAATACC
AGTAACCTATACATTTAAGCTCTTATCAGGGTAGTAACTCGTAAACTTTGGAATTTTATT
ACGGTTTTATTGTAATAGTATGTCTAAATGAAATGGGTATAAAAGGTTTGTGGTCTGTGC
TGACTCCTTTCAGTGAAAAGAAATCCTTGCATGAATTACGGGGGGAAACAATTGCAGTAG
ACCTCTCTGGTTGGGTCTGTGATAGTCAGAATGTTACGGAACACCATGTCCAACCGAAAT
TATATCTTAGAAACCTGTTCTTCAGAACGGTGTATCTGCTATTGGCTGAAATAAATCCTA
TATTTGTATTGGAAGGAGATGCACCAGAACTCAAAAGAGATGTAATGGCTACTCGAAATG
CTGTCCAATTTCGTGGTGCCGCACCCAGATCTGAGAAGGCTTGTTCAAGTGAAAAACTGC
CTAATGTTTCCAGAAAGAGATTTAAAAATGTTTTAAAGGAAGTATGTGGATCACTCTAGT
AATTACTCAAAGTAATGCAAAGATAACTTGAATATGTTAGGAAAATGTGAAAATTACTTT
TTTCAGTGTGAAACTCTTCTCAAGAGTATGGGAGTGATATGTCTTAAAGGTAGCGGAGAA
GCTGAAGCAACATGTGCCCAATTAAATGCTGAAGGTGTATGTGCTTAAACAATGTAGAAA
AAATATACATTTATTAATATATCTGTTTAAAAAAAAGAAGGGATTAAGTAGTTTAGTACA
TAGCAGTAAACATATTATAGTAATAGCTTAAACAATAGTGCATGGAAATTTTTGCATGTG
AAACTCATCAGAACCTTCAATTTACGATTCTTTGAGTTTTAGACACTATTTCTTAAATGA
TTCTCTTTTGTACTCTAACAGATGTTGTGTTTGTAACCAGATACCAATTGTTTGGTTGTA
GTTTCTTCTGAATTTTCATAATTCAATGATATTAAATTAATGAGTTTATTTTTATTTTAC
AACAAAATTTGGAAACAAACAACAAACCTATTATTTGGAAACTTACAATGAGTTTCTTTG
ATTTGTACATACACTGTCGTACATTTAAAACATACTTTTGGTGTAGTTCGTCGATGCAGT
TGTCTCCCAAGATTCGGATTGTTTTGCTTACGGAGCGAAACGAGTGTACCGAAACTTTAG
CGTGTCGAGTTCAGCCGGCGGAGGTGCGATGCAGGGCTCTGTTGACTGCTATGACGCCGA
AAAACTGTACAAGTCGAATGGGTTCGGCCGCAACAAAATGGTGGCGTTGGCTTTGCTTTG
CGGGTGTGACTACGTCGTGGGCGCGTGTGGTTCGTCCATAACGACGGCCGTGCAATTTTT
GCACACTGTTGCTGATGATGATGTAATTCCTAGGTTATTATCGTGGGTGTCGGATCCCGA
TTGTTACGAGAGGCGGGCTCGCTGGGCGTCCGCCCCGGGACGCTGCGACCGCTGCGGTCA
CGTCGGACGCACACACCTCAGGAATGGATGCCCCGTTTGCGCCACGGACCGAGGCTGCAA
CGATCTCGGACATAAGTCGAAAGTAGCGGAAGCGAAGCGAGAGCTGTCACTTCGCAGCCG
GGCCCTGTCGAGCGGCGTGCTCTTCCCCGAGCCGAGAGTTATGAAGGAGTTTTTGAAGCC
CACAATTGAAAAAATTGAGTTGGACAGCTTGAAAACGCCGGTTCCGAGTTTGATACAGTT
TGTGAAATTAATGGTGAAGAAACTTGATTGGTCGGAACGGTACTGCGTCGAGAAATTCTT
GCCGTTGCTAACGAAATTTCATTTACAAGAACGCGTTCCGTCTAGAACCGTGCAACCCAT
TCGTATAAAGAAAAAGCGGAACCCGAGAGGTGTTCCGAGTTACGAAGTGGTGTGGGCTGA
CGTTAACGGAGTATACGAAGCACTAATTCCTGATGATCAATTTGAAGAAGATGAAGATCC
CTCTGTTGTTTGGACGTCAACAGAGAGACAAGATCTCATGCGGCAGTTTTATCCGAAGAT
AGTTGAGGCATTCGAAGAATCTATAAAGAAACCTCTAAAAGCAAAGAAATCAAGAACCAA
GAAAAAGAAAGAAGAAAAAGAAAATATACAGGAAGATAAACCGAAAAGGCGTTATAATAG
AAAACCTAAAAATAACGTTGAAATTTTAATATTAAATGAATCTAATAAACATTCGAAATT
TGAATCGAATTCGAGCAAGCTGAATGTCAGTGTTTCCGTGAATAAATTAAAAAGGAAGTT
GAAAAACACGAAGAAGTCCACACAAAAAACCATGGACAGTTTTATTGCGAAGAAAAAGAA
GAAATCGTTGCGTAACAGTTTGGTCTTGAGTGTGAGGAGGAGCTTTAAGAATTTGTCCAT
AGCTGAGGATAAAAAAATAAATAAAAATAAAAACTTTTTGAGCATACTGAATAAATCAGA
CGAACTAGATCACAGTGACTTGTCAGGTATTATAGAGACTATAATTTCGAGATCACCCGT
AGTCGAAACAGCCAAAGTGGAAAACAAAACGTTCAAACTTGTATTCGATAAATATTCAAC
GCCGACAAAATTCGCTTTACGTAAAACTGTACTGAGCGATATACAGAATAATTGTTCGAC
ACCGAAAGACAGTCCGAAGAACAGTTTTAATGCTTCAATGAAATCTAAATTGAATACGAG
TTATTTCTTTGATAAATTGACTGAGGAAAGGGACGCCTTCGAAATGTCGCTCGATTACAA
GCACAATAGCGCTGTTATTGTTGAATATGATAAGACTTTAGATTATAGTTTGCCCGAAGT
CTGGTGATTAACGTAAAGATATTAAAGAGTTTGTTGTCGAAAAAAAAAAAAAAAAA
(3176 bp)

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