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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68822_c0_seq5
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_flap_endonuclease_GEN_isoform_X1_[Bombyx_mori]
Ontology
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000738 P DNA catabolic process, exonucleolytic
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:14.59 TPM:25.44
ORF EntryO_BomoEE17102_complete:A_BomoEE_comp68822_c0_seq5
Sequence
(Nucleotide)
ATCACATCCAAATTATGTATGTACGATGCATGTAGTTAATAAATAGTAACTCTATGGTAC
GATGATATGACGGCAATATTGGCAATTCTTGAATATTTAGTGTATTATCTAATATTATCT
ATGATGGCAATATTGAAATTGTCGTTGTATGATTAGGTTTAAAAATTCAAAATAAATGGT
TATTTTTCTGCGAAAGTCAAAATATCATATAAACAATATAAGAATAAAACTGAAATATTA
AGTGTAACGTCTATGATTATATGTAATACGATTTACTAACTACAAAGTTCATAAATTGCG
ATATATATCCAGCAAAAATAGCAGTAGCTGTTACATCAATAAATAATCACACAAAATACC
AGTAACCTATACATTTAAGCTCTTATCAGGGTAGTAACTCGTAAACTTTGGAATTTTATT
ACGGTTTTATTGTAATAGTATGTCTAAATGAAATGGGTATAAAAGGTTTGTGGTCTGTGC
TGACTCCTTTCAGTGAAAAGAAATCCTTGCATGAATTACGGGGGGAAACAATTGCAGTAG
ACCTCTCTGGTTGGGTCTGTGATAGTCAGAATGTTACGGAACACCATGTCCAACCGAAAT
TATATCTTAGAAACCTGTTCTTCAGAACGGTGTATCTGCTATTGGCTGAAATAAATCCTA
TATTTGTATTGGAAGGAGATGCACCAGAACTCAAAAGAGATGTAATGGCTACTCGAAATG
CTGTCCAATTTCGTGGTGCCGCACCCAGATCTGAGAAGGCTTGTTCAAGTGAAAAACTGC
CTAATGTTTCCAGAAAGAGATTTAAAAATGTTTTAAAGGAATGTGAAACTCTTCTCAAGA
GTATGGGAGTGATATGTCTTAAAGGTAGCGGAGAAGCTGAAGCAACATGTGCCCAATTAA
ATGCTGAAGGTTTCGTCGATGCAGTTGTCTCCCAAGATTCGGATTGTTTTGCTTACGGAG
CGAAACGAGTGTACCGAAACTTTAGCGTGTCGAGTTCAGCCGGCGGAGGTGCGATGCAGG
GCTCTGTTGACTGCTATGACGCCGAAAAACTGTACAAGTCGAATGGGTTCGGCCGCAACA
AAATGGTGGCGTTGGCTTTGCTTTGCGGGTGTGACTACGTCGTGGGCGCGTGTGGTTCGT
CCATAACGACGGCCGTGCAATTTTTGCACACTGTTGCTGATGATGATGTAATTCCTAGGT
TATTATCGTGGGTGTCGGATCCCGATTGTTACGAGAGGCGGGCTCGCTGGGCGTCCGCCC
CGGGACGCTGCGACCGCTGCGGTCACGTCGGACGCACACACCTCAGGAATGGATGCCCCG
TTTGCGCCACGGACCGAGGCTGCAACGATCTCGGACATAAGTCGAAAGTAGCGGAAGCGA
AGCGAGAGCTGTCACTTCGCAGCCGGGCCCTGTCGAGCGGCGTGCTCTTCCCCGAGCCGA
GAGTTATGAAGGAGTTTTTGAAGCCCACAATTGAAAAAATTGAGTTGGACAGCTTGAAAA
CGCCGGTTCCGAGTTTGATACAGTTTGTGAAATTAATGGTGAAGAAACTTGATTGGTCGG
AACGGTACTGCGTCGAGAAATTCTTGCCGTTGCTAACGAAATTTCATTTACAAGAACGCG
TTCCGTCTAGAACCGTGCAACCCATTCGTATAAAGAAAAAGCGGAACCCGAGAGGTGTTC
CGAGTTACGAAGTGGTGTGGGCTGACGTTAACGGAGTATACGAAGCACTAATTCCTGATG
ATCAATTTGAAGAAGATGAAGATCCCTCTGTTGTTTGGACGTCAACAGAGAGACAAGATC
TCATGCGGCAGTTTTATCCGAAGATAGTTGAGGCATTCGAAGAATCTATAAAGAAACCTC
TAAAAGCAAAGAAATCAAGAACCAAGAAAAAGAAAGAAGAAAAAGAAAATATACAGGAAG
ATAAACCGAAAAGGCGTTATAATAGAAAACCTAAAAATAACGTTGAAATTTTAATATTAA
ATGAATCTAATAAACATTCGAAATTTGAATCGAATTCGAGCAAGCTGAATGTCAGTGTTT
CCGTGAATAAATTAAAAAGGAAGTTGAAAAACACGAAGAAGTCCACACAAAAAACCATGG
ACAGTTTTATTGCGAAGAAAAAGAAGAAATCGTTGCGTAACAGTTTGGTCTTGAGTGTGA
GGAGGAGCTTTAAGAATTTGTCCATAGCTGAGGATAAAAAAATAAATAAAAATAAAAACT
TTTTGAGCATACTGAATAAATCAGACGAACTAGATCACAGTGACTTGTCAGGTATTATAG
AGACTATAATTTCGAGATCACCCGTAGTCGAAACAGCCAAAGTGGAAAACAAAACGTTCA
AACTTGTATTCGATAAATATTCAACGCCGACAAAATTCGCTTTACGTAAAACTGTACTGA
GCGATATACAGAATAATTGTTCGACACCGAAAGACAGTCCGAAGAACAGTTTTAATGCTT
CAATGAAATCTAAATTGAATACGAGTTATTTCTTTGATAAATTGACTGAGGAAAGGGACG
CCTTCGAAATGTCGCTCGATTACAAGCACAATAGCGCTGTTATTGTTGAATATGATAAGA
CTTTAGATTATAGTTTGCCCGAAGTCTGGTGATTAACGTAAAGATATTAAAGAGTTTGTT
GTCGAAAAAAAAAAAAAAAAA
(2661 bp)

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