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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68744_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_HIT_domain-containing_protein_1-like_[Plutella_xylostella]
Ontology
GO:0000182 F rDNA binding
GO:0000439 C transcription factor TFIIH core complex
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006364 P rRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0071480 P cellular response to gamma radiation
Transcript
Level		FPKM:8.36 TPM:14.57
ORF EntryO_BomoEE16920_complete:A_BomoEE_comp68744_c0_seq1
Sequence
(Nucleotide)
GTTTTTTTTTTTTTTTATTGTTTTATTAAATTTTATTACGTAAATTATCACAATATTAAC
TTAAAGATAGTTTCTTGAAATTAAGCAGTCCATTTGAGGCATCGCGTATCCAAGTGAGTT
CCGAGACACTTTACACTACAATATCTAGCACCACATGGTATACATGTGTAATTCGATGGA
AACCCACAAACAGCACAGAAATGTCGCTCGGGAAATCTGAAAATGTCGCATTTTATTAAA
TTTCCCATTATTTAAGATTATAAAGTATTAGAAATCCTTTACAGTTATATAAAGTTTTTC
AATCTAACTTTTCAAGACTAATTTCATGATACGCCAAAATATGCTTAGGATTTTATCATT
TCTGAGAGACTACACCATTTTCGAGAACGATATATTTAGTTTTACAATAGTTCAGGCGAT
AATACATAGTTTATTTTTATTAATTCATACATTAATTCATTGAGATATATTTGAAAAGAT
TTTAAGTTAACACATCATCGACTATAATATGAACTTCGACAGTTCGAATAATTGTTTCAT
TATAACAAGAGGATTTGCAGAAGATCAGTTCAAAGAGGAGAAAAAAATTTGAGCACTCAT
AACCACAGTTTATAATATTATTGTATTTCCAAAGCTGCCTACATATTGGCACGAATTTCG
TCTTGTACCTACAACCTTACATACATGAATGCCAAAACTAGGTGAATAACAATAACTTAA
CAAGTGCTTTTACTTAGAAGGTGGCGCTTGTGCGGACAAGTAGTTAGGAGGTTTTGATCT
AAAACTTGCATCCTCTTCTACCAGCTGCGCAAACGTTTTCCGAAATCGCATCTTATAATA
TTCAGCGCTTTTAGACTTCTTCTTCCTAGTTGGTTTCTCATTAGAGTCTGCGAATTTCGG
CACCTTCTTTGACATAACTAAATCTGCATGTGGGTCTTCATGAAAGTTATCTTGTTCTAG
GGCCTCAACTGCTTTTCTCGCTCGACGTTTTCTCGCCACATCATCCAAAACCTTTCTTCT
CTCGGCATCTTTGACTCTTCCAGATTCGCGTGAGGTCATTTTGATGTAGCAACTCGTAAT
TTATAATCCTTTATCGTGCACGGGTATGCTGAGCTGGTCCATTAAATCGTCAACGCGAGC
TTGTAGAGTCTCCACAATATCAGCTGATATGAACAAGTGTGTTTCATCCAGGTCTTGAAG
AATAAACTTTCTACCAAGTGCAAGAGTTTCATCCAAGTGTAGTAAGAATTGTTTCATTGC
CGGATCACATTCAACGAGGACACCTTTCATTACATTCACCATGGTTCATTGTTTTAGAAC
TTGTCACTTTATGTAATAATTAATTGTAAATAAAGTATGTAGGTACCTATTTACTCCCTA
CTTTCAGTAGATACCATAGGTTATACAGAATACTATTACTATTATAAACTATTATTCATA
GACTATACACTTAATATCTATTATTTATG
(1469 bp)

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