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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68616_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_long-chain_fatty_acid_transport_protein_4-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0000038 P very long-chain fatty acid metabolic process
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031526 C brush border membrane
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0042760 P very long-chain fatty acid catabolic process
GO:0043588 P skin development
GO:0044539 P long-chain fatty acid import into cell
Transcript
Level		FPKM:0.38 TPM:0.65
ORF EntryO_BomoEE16654_5prime_partial:A_BomoEE_comp68616_c0_seq1
Sequence
(Nucleotide)
GCTCGGTCGTGCCCTACTGGGCTATTCGCCAGCTACAGCATGGACGCGTTGCTGGCAGCG
CTCGTGGCTCTGATGGCAGTTGCCGCCGCGATGGCCGCCGTGCTGAGTACGCTTTCTAAA
GCTGCAATATTCGCTATCCTCGCGATAGCGCCCTGTGTGTATCGTTACAGAAAGCAGCTC
TACATTATTTTCGTCACTCTTCCACGAGACCTCAAATTCCTATGGCGCTACGCGAATGGC
ATGGTAAGGTCGAAGCGATGGGGACGTCAAGATGCAACTGTAGCGGAATTGTTCACGCGA
CGTGCTAAACGGAATCCCGATGCGCCATGTTTTATTGTTGTTGGAGATCGAACGTGGACC
TTTGGACAGATTGCGTCGAAATCGAACCAAGTGGCGCGAACTATGCAAGAGCACCTGCAG
CTCAAACGCGGTGACGTGGTCTGCGTATTCCTGCCCAACAGCGGCGAGTACATCTGGACG
TGGCTTGGCATCGCTAAAGTCGGAGGCGTTTCAGCACTGATCAACAGCAATCTGCGACAT
AAACCCCTCTTGCACTGCATACAAGTGGCCAATGCAAAGGCTGTAATCTTCTCTGATCAA
CTTACGGATGCGATTGACGAAATCCGTGATCAACTACCGAAGGGACTAAAAATGTTTCAA
CTGTATGGAAAGTCTAAACCTGGTATTCTGGATCTTGAGAATGAAATGAGCAAGCATTCA
ACAGACTACCCAGTCGTCACGGAGAAGCTTCATTATAAAGACACATTGCTTTACATCTAC
ACGTCAGGCACGACGGGAATGCCGAAGGCTGCTGTTATGCCAAACTCCAAGTATTTGTTG
ATTGTAGCAGCGACGGTCCACATGCTGGGTTTGAATTCATCAGACCGCGTTTACAACTCG
CTACCACTGTACCACACTGCGGGCGGTGTGGTGGGAACAGGGGCGGCGCTGGTCGACGGA
ATCCCCTCTGTGATCAGGCCCAAGTTCTCGGCGAGCAATTTTTGGACTGACTGTATTAAA
TATGATTGCACGGTGGCCCAGTACATTGGCGAGATGTGTAGATACTTGCTGTCTCAACCG
GCGCGACCGACTGATTCGCAGCATCGCGTTCGCATCATGGTCGGCAATGGCATGCGACCC
GCTATCTGGCAACAAATAGTGGACCGGTTCAAAATACCGCAGATCAACGAGATCTACGGC
GCGACCGAGAGCAATGCAAACATCATCAACGTAGACAATACCTTGGGTGCTGTAGGCTTC
CTTCCCAAGCTGGTACCAACCAGCCTTCACCCTATAGCGTTGGTGCGCTCGGACGATCAG
GGAAACCTGGTGCGAGGACCTGACGGCTACTGCATCCGATGCCCCCCAAATGAGCCTGGT
ATGTTCATTGGACTTATCGCCCAGGGGAATGCGTCCCGAGAATATTACGGATACGTCGAT
AAGAACGACAGCAACAAGAAGTTGGTACGTGACGTTTTCTGTAAGGGAGACGCAGCCTTT
GTGAGTGGCGACATCTTAGTGGCAGATGAGTTAGGTTATCTGTTCTTCCGTGATCGCACC
GGGGACACGTACAAGTGGAAGGGCGAGAACGTCGCTACCGCCGAGGTCGAGAACGCCATG
TCACCAGTGTTGGATGAGAAGGCCTGCGTTGTCTATGGTGTTTCGATCCCTCAGACGGAA
GGACGAGTCGGCATGGCTGCCATAGCCGATCCGTTAGGCGAATTGGACTTGAAGAAGCTT
GCGCGGGATTTAGATGATTGCTTGCCTTCGTATGCGAGACCAATGTTCCTGCGTTTCATG
AATGATTTGGACATAACAAGTACATTCAAACTAAAAAAGTTGCAATACCAAAAGGAAGGT
TTTGATCCTGACGTCATCAAGGAGCCGTTATACTTCAGATCCGGAGACAGTTTTGTACCC
ATAACCTCTCAACTATTCCATGATATTTGTAACGGAAAATTGAAAATTTAATTATTAAAA
GCATCCGTTTTTGAAAACGATCAGGGCAAATCGTCGCGTTTGCAAATCGTACAAGTTACT
CAATGTCACAATCGTTAGTCTAAATGAGGAGTATTTCACTAAATATATGTATTGAACAAC
GGATATGGAGAATGGAATATTATTAAATTATTATGAGAGAAATAATATGTTAAATATAAT
TATTATTTAAATAAATATTGATAAGATTATGAAATGAATCTGTCAATGGGACTGTAAGTT
CTTTTCAATTTCAAAAACACGTCTAACGTGTTTGGTAACTTTGATAGCAAGTGTGCTTAG
TGCGAGTTCCTCTTTTTCATCATTTTTGATTCCAATAAGAGGTATAGCGTTAATAGCTTC
TCAATAATGTTTCTTGTAAAAAAATTAAAATCGCATTACGGGAAGTGTTTGTGATGACCG
ATCCTCTGTGATAGCGTTTTCTTCTTTACTCCTCTGAATGTCTCTTTCAATGCATTGCCA
ATCACTAGTAACGTTACCGCGACCGAATTAGTAAAATAAATCTCGCACTCGGCACAGAGA
TTTCAATTTTTTATGTGAATGTAGTAAATTAGACGTACACCAACGTTACCTTGTGATAAA
AAACAATATATTAGCCACATTGTTTTGGCATAGGCAATATTGTAGGTATAGTGAATTAAG
TTGCCTCTCGCTAAAAATTTAAAACACATTAATCAATCGAAACACAATAACAGCAGTAAC
TTTACTTGATACATAGTAAAAATACTAGGGAACATTCCACCATCTATCTAGTCACATAAG
ATTTTGTTTTTTAGAATTCCATAAAAATATTTCTGTTCCTTGTGTATTGTTTTTAGTTTG
TTTTTGTAGATTTGGTTACTTTGTTTAACGCATGATTTTTTCGGTATTATTGTTTGATAA
ATGTGAAGGCACTAAAAGCGTTTTAGTATAATGGTTCAGTCAAATCAGAATTCGAACGTT
CGGTTTTAATTTCGACTAGGTTTGTAAAAACAACAATGTACTAATTTTCAATGGGAGTGA
TGTAATCAAGTAATTGTTTTGCATAAAATGTAAATAAACACAGTTCTTTACGTCATAATG
TTGTATTT
(3068 bp)

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