SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68556_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_unconventional_myosin-XVIIIa,_partial_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
Transcript
Level		FPKM:6.27 TPM:10.93
ORF EntryO_BomoEE16548_5prime_partial:A_BomoEE_comp68556_c0_seq1
Sequence
(Nucleotide)
GCGTTGTTCGATGTGCTTGCTCTAGCGGCGCGGCGTTCAGCAGAACTTCAGTTCGTCTCT
TTCCGATTTACTAACGTTACGTTGTTTAGGGTGTAAAAACATCGATATTCCAAGACAACT
GTCAAAAAATCTTTGGATGCTGTGATAATTGTGAGAATATTTCGTATTTTTTTCTCTAAT
ATGTCCTAGATTGTGACAGTATATACACGTTGAAGTGCTAGAATTCATGATTTCTTTAAA
CTATGTGGATATAAAAAAAGGAATTTGTGATGTTTGTGTATAAATAAAGTGTTTCCAAAG
GATTGACCACTTAATTCGGATTACGACTATACGAATCGCCCAGCTATGTTCAACTTTATG
AAAAAGTCCACCGTGCTGGCTGGAGGCGACAACGGTGGCTACGATGATCGCGACGGAGAG
AAAGAACGAAGAAAGAAAGAGAAGAAGGAGAGGAAGGAACGAGAGAAGAGAGAGAGGATC
GCAGCTGGCCTCGAAGAGCCTCTCCGACTTGAGGAGGTCCGACGATCGCTCAAATTGCGG
GGTAAACGCAAGGAAAAGGAAAAGTTGCCTTCTGGTATCACCGCTGACTACACCGCCTCG
CTGTTCGCCCATCTGGAACACGATTCCAATTATTCGAACTACCCGCTGATTTCCAACTCC
GGTTCGAATTCGAACTTGAGCGACGAGACAAACCATTTGTCGCCGAGCTTCCCCACAACG
CACACGTGGGGCAAAAAAGAAAGCATTCTACAGTCGGATAGTTCAGAGACCTCTCTAAAT
TCTTTGAATAACCCAAATAATATTAACAACACCAGTCCACGACAACCGCCGAATCTACCT
CCGATTCCACCTCGACCTCCGAAACGAGGAATCCTTAAAGGCCCTCGTCTAAGCAATACT
AGTTCGAATTCTCAAGAGAGTAACGTTAATAATGCCGATGTAGTGGACCATGTGACCAAC
GGTCAAGATTCTAACCTGTTGGCACGTAACACGCAACAAAACGAAACCGTGTCTTATGGT
ATTTCTGCATCGAAGAGTACTTCGTCCAGTGATGACTTGCAACACGTTCAAAACTTTACA
AAGAAAGTCATTCACAGTCCCGTGGAGATGCAAAGCAAAAATTATAAAAACAACTCCGCC
AATCCAACAATCACAACGCAAGATGTTGACGCAGCGCCAAAGACGAACGGAAACAGTTAC
ATGGGAATAACATCCACTTCTCCCAGCGCTGATTCCTTGACCGACACCACGACAAATTCC
TCATTTGCTACACCACCGTTTTCTACGTCGCCCGTTGGTGAATCTCAGGGTTTCCACAGA
TGGTCACGAACCAGTAACTTTGACGATACCTACCTACCATTACCGGCCATAATGCCAGTT
CAACTGCCGAAGCCGAGAACATTAACGATTCAAAGGCAAAAAGCACCGCGTAACGACTTC
GGATTCAGTTTACGAAGGGCAATGGTCCAAGAAAGAATATTCATAGGCGATCTAAATAGT
CACGGAAATGGCTTAACGAACGGGGACAACAAATGTAGTGGCACCACTAATTTGATCAGC
AAATTGATTTACAAGGCCGTTATCCTAGCAGAGCCCGGCTCTTATCCTGGAGCCAGCGAG
ACGGGCCTATTACCCGGTGACAGATTGCTCGAAGTTAATGGTATCAGCGTTGAGGAAAAA
AGCAGAGAAGAGGTCATCGATCTGATTAAGGGCAGCCAAGATTACGTTACTATCAAGGTG
CAACCAATAGCAGAGCTGTGTGAGTTGTCGCGCAGACGTGCGGCAGACGGTGGCGGTGAC
GTGGATCTTTTAGACAGCAACGTCCGTGGAGGCACCCTGAGCCGGTCCGGAAGTCGCCGT
TTCACATCCGCCCAGGCAAAATCGGAGGAGCAGTTAGCATGCGAAAAGGAGTGGCTCCAA
GCCGGTCACATGTGGCTGGCGCATCGCGGTGGCTTCACTGCCGTAGTGAGAGAGGGTGAC
GCAGAAGCTGGTCGCACTAAAGTACGCGTACTACAAACCGGGGAGGTCCTGACTGTTGAT
GAAGATGACCTAGAGAAGGCGAATCCGATTCAGCTGGAGCGCTGTGAAGACATTGCCTCC
CTGCGTTGTTTGAATGAATGTGGCGCTCTCAATGTATTGAGATCTCGATATGCCGCCGGA
CTGACGCACTCCCGCGCCGGTCACGCTCTCCTGGTAATGGGTCCACCTAAACGGACTGCC
CCGATTTACACGGAGAAGGTGGCGGCTATGTTCCGCGGCTGTCGCGCCGATGACATGCCG
CCCCACGTGTTCGCCGCAGCTCAATCTGCGCACCGCTGTATGCTCGCATCTAGACGAGAT
CGAGCTATAGTCTTCCTCGGCAGGTCTGGTTCGGGTAAGACATCGGCAATGCGGCACTGC
GTTTGGTACCTGGCAAGTGCCTACCCAACTCAAGGCTCGAAATTGACTCCTGAGCGACTG
GACGCAGCTTTCGATGTTCTACACATGTTTGGATCCAGTCGCACTGGATCTAATCCTCAT
GCGTCGCGTTTCGTGTCTCTGACGTCGCTCGACTTCGACGGCGGCGGCGCTCTCGTCTCC
GCCTCAGTGCAGACGTTACTACCTGACTTCAAACCTGGTCAGACAACGCTTCGAGCACTC
CATACGCTCTTCCACGGCTGCGACGGTCGCCTCCGTCGCGAACTCCTGTTCGAGCAGGCT
CCGGTGACGGCGCCCAACCCCTTCCTCAGCTCTCAAGAGAAGGCCGACGCTCCCGCCGAA
TTCTCAGCGCTAAAGGAGGCTCTGCAGAAACTGGGCGTTACGGAATCCGAGCAGATGGCC
ATTTGGAAGATCATGGCTGCTATATGTCATTTAGGATGGGCTGGTGCCGTCAAAGCCAAC
TCTGGATCAGCCGTCAAATTTCAATTCGCCAGCACGGGGTGCGGTCAGCGCGCTGCCAAG
ATGCTGGGCGTCACTCCCGAGGAGTTGATGCGATCTGTCTTCGCAACTGTTCCCACTTCC
CCACAGTCTAATTCCAACTTGAGAACTCCGTCGCCTTCGAACGAAAAAGAGATCTCGGCG
ACTGAAGCGCTGGACGGGTTCGTGAACGGTCTCTACAACGAAACCTTCAACATCGTCGCT
GCACTCGTCAACAGGAGCTTATCCACGTCGGCGAGGACATCAGCTTCGATATTATTGCTG
GACACTCCCGGAGCTGACAACCCTATGTGCGCCGGACAACAGAGCGGGGCAGGGCTGTCC
AAACTACTGTCTAACTATTTACAAGAACGTCTCCAAGCTGTGTTCCACGAGGCCATGCTG
GTGGCGCCGCGGGACCGGTACGCGCAGGAGGGGATCGCGCTCGACGACGGAGCTGATGAA
GATTGGCTGTCGGAAGCGGTGAGCCCGGGACCGATGGTGGAACTGCTGGATAAGGCTCCG
CAGAACTCGATCGTGCGGAGCTCACAGACCGACCTGCGGGAATGCGACCGACGCGGACTA
CTATGGCTACTAGACGAAGAGTCCATGTATCCCGGCTCGTCCGACGACACGTTCCTAGAG
CGAGTGATGACGCACTACGGTCCGCCGAATCAGATGCAGTACCTCATCAAGAAGGCCCCG
CATGCCAGACAGTTTATATTGCAGCATTTACAGGGAACTAACCCGGTGCTATACGACGTC
ACCGGCTGGGTGAAGGCGAGCCGCGAGAACCCAGTCACGAAGAAGTCTCTCACATTACTA
CAGGAGAGCCAGAACGAGGAAGTGTCACGGCTGTCGTCGTGGGCTCGCGGCGCATGCGGC
GTGAGCGCGTGGTCGGCCGCAGTGGGGGACGCCACTACTCTACGGCGGGCTTCTTCTATC
CGACGAACCCTTACTTCGGGTACGGCCGGCATGAAGCGTCGCTCGACCGCCCTGCAAGCG
AAGTTCGTTGCGGACGGCGTGGTGGACACGCTGCGGCGGTGCGGCACGAGCGGCGTCATG
TTCGTGTGCTGTCTGCTCGCGAACCGACCGACCGACTCGCCCGATGACGTCAACGTGCCG
CTCCTACGATCGCAGTTCCGCGGATTCCAACTGCTGGACGCGTCGAGGCTTTACAAGCAA
GGTTTCCCCGAGCACATGCCGCTGTCGGAATTCGCCAGAAGATATCGTCTTCTAGCGACA
TCCGAGAGTGAAGACTCCGAAACGAATCAGCAGCAGACCCTCTCGGACAGGCAGGTCGTC
GACGACATGCTCCTGGCCTTGGACTTGGACGTCACCAGCTACAGGCTCGGGCTCACTCAG
ATTATGTTCAGGGGCGGCGTCGTCGGCGGCTTGGACGCGCGTCGAGACGCCGCGCTTGCC
CGCGTGCTCGTTCGCCTGCAGGCGAGGGCGCGCGGGTTGCTCGCCCGACGCAAGGCCCAG
CGTTTGCGGACGCAGCACACGGCCGCACGGTGCATCCAACGCAACGTGCGGGCCTTCCTC
ACGGTGCGGGACTGGCCTTGGTGGAGGCTGCTCGTGCGAGTCACGCCCCTGCTCGCCGTG
CACAGGACTGAACATCGACTTAAACAAGCACAGGACGAGTTGGAGACGCTTCGTTCTAAA
TTGGACAAAGTCGAAAACGAAAGGACACATTACAAGAGCGAAACCGAACGACTCGAGACT
AAGCTCTCGGAAGTGGGAGGTGAGCTAGCAGAGGAAAGAGCGGCCGCCGGACTCGCAACG
GAACGAGCGGACGCCGAGGCTGCAGAACGCCTTCGAGTGGAGAAGGAGAACAGAGACTTG
GTCGCCAATAACCAGCGATTACAGCAGGCTTCAGAACGTCTAGAACTTGAACTCTTGCAT
TGGCGTTCGGCCGATAACGGAGCAGCGGAACATTCAGATTCGGAGGGATCCGAAGCGGAC
GCGGCCTCCGCCGGCGACAAGTACAAACGGCGATACGAACGCGCCCACCGAGAGCTGCAG
CTGATCAGGGCGCAATTGAGACGCCAACACGAGGACGACCTCGAACAACTCGTTACGGTC
AAGAAGCAGTTGGAGAAGAAGGTTCAAGATGCATACGAAGAGGTCGAAGAACAGCGAGCC
GTGGCCGCGCAATGGAAACGAAAATTGCAGAAACTCACCAACGACATGGCCGACCTGAGG
TCGCTTCTCGACGAACAGACGTGCCGCAACAACTTGCTGGAGAAACGCCAGCGTAAGTTC
GACGGTGAGCTACAGGCGGCGCAGGAAGAACTGAAGAGAGAACGATCGGCCAAGGAGCGG
ATCTCTCGCGAGAGAGATCTAGCGCAGGCGGAGAAGTTCGCAATGGAGCAGTCCCTTTCT
GAAGCTCGTATGGAGTTGGAGCTGAAAGAAGAGCGGCTGTCGGCGGCGGCGCGCGAGCTG
GAGGAGCGGGGCGGCGGCGGCGACGAGCTGGCGGCGCTGCGCCG
(5384 bp)

- SilkBase 1999-2023 -