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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68520_c0_seq3
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735866_isoform_X3_[Bombyx_mori]
Ontology
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006301 P postreplication repair
GO:0010976 P positive regulation of neuron projection development
GO:0031372 C UBC13-MMS2 complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042275 P error-free postreplication DNA repair
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045739 P positive regulation of DNA repair
GO:0051965 P positive regulation of synapse assembly
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
Transcript
Level		FPKM:6.62 TPM:11.54
ORF EntryO_BomoEE16439_complete:A_BomoEE_comp68520_c0_seq3
Sequence
(Nucleotide)
TTTTTTTTTTTGAGTGTTATTTGATTTATTTTTGCTAGTATTACATTGGTAAAAATATTC
ATGTTATGAAACAATTTGACTTAGCATTTGGTTGGTACTATGAGTTTACAGATACATATT
GTGATTACTGCAGTTTTTTTACTCTTTAATGAATTGGCGATTATGCCAAATGCACATTGC
ATTAAATGCATAAATTACAAAGACCAAGAATCAATAGTACATTTACCTTATTTTCCTAAG
AAATAAACACCTATGTTTACACATGTAAAACTATTAGAAAACTAAAGCAAATATAATTAA
GCAAAAAGCAAGTCCCATAGTAAGTTTATGATAAATATTCAGAGATAAATAAATGTTTTT
GCTTATCAGACATTGTTTGAGATATTATTATATATTCCACATATTATGAGTACTATTAAA
CATTGTTGTTTTAAAGACCATGAGTAATTTAATACAACAATATTATAGCACTAGTGTTTT
GCTAGCCTAAAATGAAGAAATTAGTAAAACTAGCCTTAATTTTACCAAAAGCAAGTTTCA
CTTTTATAAAGGCCACAATAATTTTGGTAATGTGATAAAATAAATGGGTACTAGAATCAG
ATATGATAAACACCCAACCTACATCTCAGAACAATATTTAAATTATAAAGGCAATAATTG
ATCTGCAGTACATGCACCAGCATGACAGTTTTCCCAATATAGAGAACATTTAATTTATTT
TAAAATTATTGTTTTATGTGAAAGTAGATTGGGCCTGTTGAGACTTGATTGAAGGAACTA
GAAAGTGCTTCCCTCTGGTGGCTGAGAAAGCTTCATGTTATCTTTAAGAGTCATGAGACG
TCTCACTTCTTGAAGAACTGTTTTGATGGTATAGTCACGCTGCCATCTAGCAAGAATTGG
GACTTGTCTATTATCCACAAGTCCAGTTTGACTATTGACACAGTTCATATGAATCCTAGA
AATAAAGCGGGCTGTTGGTGGCTCATCAGGGTATCGTGTTCCACATTCAATTTTAAGGGA
GTACATTCTATTCTCGTAGGGTGTCTGTAATTTTAAATTATAAAAAAGTAGTTTAGATAT
CACAGATAAAAAAAGTATTTAAAAAAACTTTACCCTTGGTGGGCCAATAATCATTCCAGT
CCAATGAGTAAGAGTCATATCATCATCGCTTTCAAGACCCCAAGAAATGGTTCCATCGCC
CACTCCCTTTTGGCCTTGTTCAAGTTCTTCTAAGAGACGAAAATTCCGTGGCACCACAAC
GCCTGATGACGGATTCGCCATGATCACAGTATCACCGGCTTAGAGAACTGTAAAAACTTA
GATTAATTCAGTCAAGCTTTATTGCATAGGCGCTACCTAAACAGATTCGTTTTATTTAAA
GTAAGTATGGCAATTTACAACAGAGTAATTGTATTTTAATTAAACTAGATTTTGTTCCAA
TAAAGAGAATGAAGGTTAGCAATTTTTTGTTGACTTTGACAAGTTGCATTAACCATAGAT
TTTTTGTTTGCTAATTCACTTAGCTAGGCGAAAGAAACAACGCAGACAGCCAAAAGTATT
AGAATTTTTTTCAACACCTAATTTGAGAACTCAACTTTATTCACGTGCTTTTGTGCATAA
AGTTGAATCAAGTGTGCCTCTTATTATAAAATATTACATCTTTACCTAAGAAATTGCTGT
TTAGGCTTACAGAAAGATAAAGCATTCTTTATATTTTTATTATCGATAGGATATGCTCTT
CTTGAAGAAGTCAGATGTACGAGAGCCAACAAAATTTTTGTACTGACTCTCAAGCATTAT
TTTTTTCCCTGCCAAGAACTTGTCCAGGCTTTGAAACAAGGAACAGACTGTCGGCGCAAG
GCCTGCTGAGTACGGTGGATGACGCAAAACTTCCAATCCTAGCTGTGTAGTGCCGCGTGA
AGTCGTGTCGTGTAGGAGCAGCGGAGACCAGCGATTAACGAAGGGTGGCTGGAGGTTCAC
GAGTGCTCCACTGTGTCCTCGACGCAGCTACGGCTTTATACGTGTAAAACAAATTTAGGT
CTGGATCTAATGACAAGACCACCATCGTCGATGGTCGATGGCTGGGATCTTCATGAGAAC
CTTACTCTGAATAAAACTGAAACAATAAAACTGTAGCAATCAATATCTCCCAGATACATT
CTTAGCGAGTAATCCTTTAGATGCATTCAGCAGAAAATTGCGTTAGGGTCGTTCCACACG
CATCGACGCGCGCTGATTGAAAATGTATTGGCGCGTGGCTTATCAGGCCGGGGCACTCCG
CGGCGGCGAGCACGGCCCCACTCCGCGCCGAGCTCCCGCCAGACTCCACACGCACTCACT
CACTCCTCTGGAATCCAATAGAGTCTCTTGTAAGATGTCAGAAGGCGTATCGAAGGATGC
CTTTGTAGCCTTCTCTTTGATTTATTTTACGTTCTTCTTGGACAATGTTTTGTTAACCGT
GCTGGTGCCCATAGTCCCGGACTGGATCCGCGGCGAGTCCTTGGAGCTGTGGGCCCGCCG
GGAGGCGCCGCTCGCCGCCATCCTCAACACTACCATGCGCCACATGCAGCGAGACAACTA
CCAAGGTGTCGGCAGCTCTCAAGCAGCCGTAGGACTAGTTCTGGGAGCAAAGGCGACGGC
CCAGCTGGTGACGGCTCCGTTCGCCGCCGCCGCCGTCGGCAAGTACGGGCCCGCCAGGGT
GCTGCGGGCGGCCACCGCGCTGCTGGCGGCTGCTGCCCTCGGTACTTATTGTTCTGCTAT
ACGACAGGTATAGGTTACAGGTACAGGTACAGGTTAGTAAGCTGAAGTGGCAATGGGCTG
GCG
(2823 bp)

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