SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68494_c0_seq2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:23.75 TPM:41.42
ORF EntryO_BomoEE16393_complete:A_BomoEE_comp68494_c0_seq2
Sequence
(Nucleotide)
TTTTTTTTTTTTTTATTTTTATCTTGTTTATTTGTTGCAATTTATACAAATAATGGAAAC
AACGTGCAAAAAACAAGTCTTAATACTGAGCTCCGACGGCAAAATACAAGGTTCTCCTTT
TAGTTAACACAAGTTAATTTTAATAGAAAAAAGCGGCATTTTTTTTAACGTTTCCTAATT
AAAATTAAATCAAGACATTAAACAAAAACTCGAGTATTAGACATAAAGCAACATAGACTA
AATTGAATATAAATACTATATTTTGAGCACTGTTGGAAATATCCTTCATAGAAAATAAAA
GAGAAGTGATTAGACCTATATATCTTACTTAAAAAATGCAAAGAATACAATAATGGAAAA
TAAAAAAAATCATTAAAAAATACACAGTCCGACGTCAGCAAGTATTTATAGAAGTTAAAT
ACTCGTTATATTTCTTCTCTTGTGCTTGTTGTAGTTTCTGCAGCTTTTTTAGGAGACCCT
TACTCAACTCCTTACCCTCGTGGTCGTGCGTGGGTAGACCCTTTTCATCGAACTTCGAAT
ACTTGTCAGTTTCCTTCCTGAACATTTCGGCGGGTGATATTTTCTTTTGTTCCTCCTTCA
AACGTTGCGCCTCGAGTAACTCCTGTTTCTTTCTTTGCTTCTCTGCTTCCAAACGCTTCT
TCTCTTCTCTCTCCTTTAACAGTTCCTCTTTGCTGACCAATTTTACGACTGTCCGATCTG
GCTTGTCCTCGAGGCGCACGCCGAGGTCGGGCAGCACGCGGTCCCGCAGCGCGTCGCACA
GCGCCAGCACGGCGCCGCCCTGCCCCGCGCGCGCCGCCTCGCGCACCCGCTCGCGGAACG
CACTCAGCGCCTCCAGGTACGGCATCACCGTCTCTTCCAACGAAACACCATCAGCGTCTC
CGACCGGGAAGCCGATGCCGCCCCTGGGTCCCTCGACGACGCCGAAAACGTGCAGCACGT
CCGTGACGTAGCGCGCCGCCGCCGCCAGCGCGGGGCTGGGCCGCGCCCGCGCGCCGCGCA
GGTACACGTGGCACGCGCACACCAGCTCCCGCAAGGCGTCGATGGCGCCGCGGGTGTCGA
TGTTGTCACAGAGTGCCGCGTGAACTTGTTCCTTGGCCATTGACAGTTTAGCAAACAGCC
GCTGTTCCTCCGGTTCCCATCCACCGCCGCAACCCTCGTCGTAGCCGCTACGAAGAGCAT
CTTTCACTGTCAAAAAGAATTCGTTAAATTGTTTTTCTGTCTGAATGGCCATTTCCATTG
TATTCTCCGAGTAATCTAAAGTTTCCTTCCATCCGTGTAGCAGGAAACCGAACCGCAGTT
GTCTTGCGGTGTGGCGTTTCAGTGCGTCTGAGATCGTGATGAAATTTTTCAAAGATTTCG
ACATTTTGCAGCCAGCTATCATCAAATGTCCCGTGTGAAGGAAATAATTAACCCAACCGG
GCTCGTCGAAATGTGCCTCGCTCTGGGCCAATTCGTTGTCATGATGAGGGAATTTTAAAT
CGACGCCCCCTGTGTGTATATCAAGTTTATTTTGGCAAACATCCGAAGCCATTGCGGAAC
ACTCTATATGCCACCCGGGTCGACCTGCCCCCCATGGGGAATCCCATGATGGCTCGCCAG
CTTTACTACGCTTCCATAGAGCAAAGTCGTTGGGTGATCGCTTTTCTGCTGCATCATCAG
TTAGATCACCTTCTCCTTCTTGCAACGATTTAGTATCACCGTATGCCTCAGGCACTAATC
TTGCATAATGATGCCTTTCATTTCCATCGAACTCACTCACATTAAAATATACAGAGCCAT
TTGATTCATATGCAAAACCATTGCTAATAATCTTTTGTATGTATGCAATTATTTTAGGGA
CATATTCACTTACTCTTGTCAGTACATCCGGTGGTAATACATTAAGTGCTTTCATATCTT
TATGAAATTCATTTTCCCAATACCTAGGTAGAGTTGTGAATATTGCATTGTCTGTAACAG
TTTCTCCATATTTGTAATCTAACCAGTCAGAGATTGGACTCTTTGCTGATGTTAATAAAT
CACATCTTGAATTCTTAATCCTTTCATTGTCTTTTGATTCAATAGCAACTTTAAGGGCTT
TTACTGAGGCCGCAATCTCATCCAATGTTTTCTGCATCAATTTTTTTTTATCTGGATCTT
CTGCATTTTTTACAGCTTCCTCATAGTAATTTATAACGTTGACTGCATCATCAACGGTGT
CGTTAAGGTTTCGTGGTTCTTTTAAATATTTTTCATATAAATATTTTTGTCTGGCTCTTT
TAATTATTTTATCATCTATATCAGTTATATTCATGACATATAAAATATCATATCCAAAAT
AATTAGCCATTACCCTCCTGAGTATGTCAAATGACATATAAGATCTCGCATGTCCCATGT
GAGATGCATCGTAGACTGTAGGGCCGCAGCTGTACCAGTTGACACGATTACCATTAGCGG
GTATGAATTCTTCTTTTTGTCGGCTCAAACTATTGTAAAGTTTTAAAACTGGTCGCTCCT
TGTTTCGAACCGGAGGTGACCAAGCAGGTTGACTTCTTTTAGACATTTTTAATTGTTAGA
ACTATTAAAAAAATGTGATTTTCTTGCTTAAGTCTAACGTAAAATTTAACGTAACCTTAC
TAGACAAAAGTATTTATTTCTATTAATAATTTTTAAATTGTTCTCGCCACGTAGGTACAA
CCTACGTTTTATTTCATCACATTGAACCAGGTGAGCGTAAAATAAGAATTACTGTGAAAA
TTTTACTTTATACGGTACATATGTGTAACATGAAATTTTCTAAATTGACAATTTGGACAA
TTGACATATTTGACGTCACGTAGCCGTACTCATTTTTTTTAAGGATTTTATGACCTGGTA
ACTGA
(2885 bp)

- SilkBase 1999-2023 -