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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68469_c0_seq5
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:11.72 TPM:20.44
ORF EntryO_BomoEE16316_5prime_partial:A_BomoEE_comp68469_c0_seq5
Sequence
(Nucleotide)
GAGTAAAAATATGGCGTCAGTCTTTTGTAATGATTTATGAAAGGAAATAATCTAATTACG
ATCACAGAATTTTCAAGTGTAGTGCACTTTATTAAAGTAAATAATTTAACATCCGGCCTA
AAGTGTTAAGATACTAGGGAAGTTACTCGTAATTACGTTACAGCAGGTAAACGCTACGAT
GTCTTGGCGAAGTCGAGAGGAGCGCTGCTCGAGGTGGGACACCAACAAATGGGAACTCCG
CGATCGGTCGCCTGTATGGGAGCCTAGGAACGTCAGCCCTGAGTGCAGGTCGCCATCCCG
ACACCGACACTCGCATGATAGACGGCCTCGTCACGAGCGCGACTTTCGGCGTGACCGCCA
CGACCGGGATCGCGACCGTGACCGAGAACGCGACAGAAAACGGTACGAGGAAGCGCCCGC
GCCCCCCTCGCCGCCCGTCATCAGCGATGACAAAAAGAGCTCACGGTCTAGTAGTCGATC
CGATAGTCGTGAGAGGGACAGGTCTGATATGGAAATAGAAAAGGACAAGCACCAGGATGA
GGTGCAGAACAACGCATCACCGGGTGATTGGATCTGCAAGTGTGGTCTATACAACTTTAA
AAGACGTCAGGTCTGTTACCGTAGAACTTGTAATGGGAAAAGATCGGAGGGTGTAGTTTA
TGGAGGTGATGGGGATCGTAACGGTGTAGTCGAAACACCTGGCATCACAAAGAGGTTACT
CTTTAGGAGGCTAGATGCTTTGACTACTGAAGAAAATATATTGGAAGAGCTTAAACTACG
TTGCAGTAAAGAAGTTCTAGAGTTAATTGTAGGTATTTCAATTGGTAGAGAAACTTTAAC
AGGTGCATCAAAGTGTCTCGCCTACATCAATTTCAACTCCATAGCAGATTCTACAACAGC
ACATACAGAGTTGGTGAATCTCCAACCACCATTAAGGATTGACGGTCGAGAAGTGCTTAT
AAGCTTTTACAATGAACCTAAAAAAATTGTTAAACCAACACAAGTTGACTATACGTCATA
CTACTCTCAAATGTCTTCGTACAGTGGTGCAACAACTCAAGCAATGTCTGAGGCTGATCG
AGTCAATGCAGCTGCTGCAGTAGCTCAGTCTGCTATATCGGCAGCCCAGGCTAGACAGCT
ATCATGGACGCCAGTTGGTGCTGTACCTTTCACTGGTACTACCCAAACTACAAAAACAAA
TGTACCCATAGGTGATGGGAAGACAGTTTATCCTGCCCCAGATGTGAGAACATTCATGTA
TGATGAGTCATCTGGTTACTATTATGACCCGTCAACTTGTTTATACTATGATGGGAAGAC
ACAATATTTTTATAATAGTCAAATCAGTCAATATATGTATTGGGATGGTAAAACAAACAC
TTATATTGCTGCAACACAGGCTCAGAATGCTGAACAAAACAAACAAAGAGAGGCCAAGGA
GCCTGATGAAAAGAAAAGGAGAGACAAAGAAGACAAAGTTAAAGTAGCTAAAAAGATAGC
TAAGGATATGGAAAGATGGGCACGGACTCTAAATCAAAAGAAAGAGAATGCTCGGAGTAA
CTTTGTTATGGAACAGCCAACTGACACAAGTGCTAGCAAAGGCTCAGCAGACATTGGTTT
TTCAGTACTAGGAGCTGGACCATCATTAACTCATGTAAGAGAAATATCCCCACCTCCCAA
CACAGATGAATTCTTGGTCAAAAAGATCTCAGAACCAGTATTTGATAATGATGATGACAT
TATTGACTGGGACAAATTAACCTGCTTGTTATGCAAAAGGAAATTCCCTTCTGTAGAAGT
GTTGAATAAGCATAAAGTTATGTCAGACTTGCACAAACAAAATCTAGTTGAATTTAGGAA
GAAGAATGACTTGATTCCACAGATGAATGGTTATAGAGACAGGGCAGCTGAGCGACGTAT
GAAATTTGGTGAAGATGAGCCTCCAATGATAAGAAAACGTTATGAGCCTTCTGAACCAAT
AGGTCCACCCATTAACCCGCACCCACCTCCAAATGTAGTAGATACAATAGGAGGTAAAAT
GCTGCAAAAAATGGGCTGGTCGGAAGGTCGAGGTTTAGGTAAGACTGAGCAGGGACGAAT
AGCTCCCATAGAAGCAGAACAGAGGCCAAGTTTAGCTGGTCTGGGGCAGAAAAGAGGTAT
ATACACTCCCACACCTGGTGAAACATATCGCGATACAGTTAAGAAACTTATGATAGCAAG
ATATAAAGAAGTTGTTGGACAAGAAGAAGGGAAATAGATTCGACCTGGAATTCTACAACG
CTCCCGTCACACGCGTATTCGACAATCGAGTCTACGCGCGAAGCTGGAACCACGTGCCAA
ACAAAATATTAAAAAGTACTTCATTTTATACTCGTTGGATCGGAAATGAATTGATCAAAC
GCCATTTTAAAAATATTTAGCTTTCTTCCGTAGCGTTTCGTGTATAGTTTAACTTTAATG
TATATATATATAAAATAATTATGTAGTAAGGAATTTTGAGATTGCGTTTGATTGTAAATA
AAGATAAATATAGGTAGGTTATATTATAAAAACACGCTCTAATAATAAGCCCAAAAATTA
AAGTAATATTTTAATTCTAGTGTTTTTCGGGGCAAGATATTACGCTAAAGTAATGAAACT
AATGTATTTTCATTGATGAATGTCAATATTTAAGTTAATCTGCGTTGATTTTGTGAATAT
TACGTTGGCTAGGTCGATACAGGTCTAGCTAATGAAAGCCTGTCGAAGATGAGTTCTTGT
ACAAGATTAAATTAAGCCTAAACATAGGTGTTCATTTAAGCTAAATTTAATGATGATTAT
TACAATAAAGACATAAATAATTTACAGAGATTAGTATTAAAAGGTAGGTAATCAAGTTGC
ATAATTGTTGTTAAAATAAATGTATATACATGAAATCCTAAACTTATATAGAAGCGCCGA
AATGCGCCCTTGTCAGCTGTACGGTAGCATTTTCCCGTAACTTATAATTTGTACTCAATA
AGTGCATACTAGTCGATTGAATTTGCCGTCCTAGTAAAACATCACAACGACGTCTGTTGA
TGGATTCTATTCGATAATAAAAGAATGATTTATTTTAATAAAAGAATAAAAACAGCAATT
AACATATACGTGTATATAGTTAGGTACATTTTAATTTCACTAGCATATGTGTAGTATTGG
GTAAATGGGATTTTTAAATTTTTCATTCAGTCTTATTATTATTATCATTATTACTTAGGT
ATTTATAGCAGTTAGTTTTGAACAAATTTTCGAGATTCGATGATTGTAAGGCGTGGGTTA
AAAGTATTGTGCATTTAAAATATGTACGATAAAAAAATGTGACGCGGTCTTTAATATTTT
AAAATAAATATTTCTATACATAACGGACTATTTATAATTATTTTACCTTACTAACCAACT
AATGTTACGTTTATGAATAAAAAAATAATAATATGCATTTGAGTTTTGATGAACTCTGTG
GTCATTTAAGGACTCGCGCGGTAGATTATTAAATGATCTCCAAAAAGTAGCCAAAAATTG
TTTATTATTACATATACAATGCTTTACGTATAGTTAGATTTCTGTAAAATTTTAGGATTT
TAGTTAGCTTCCCCTGTAGGTAGAGTATCCGTAAGGGCTGAGCAACAACGGTATGTGGTA
ATGTTCGTCCTCTTTTGTGTTAAACACGATCTCAACAATAGGGTAAAGGGTTTCCTTATT
CAAATTATTATAATAGTCTCCGACATTAAACCTCAATTTGTAAATTCCGACGGCCATGAA
GTCTTTTGAAAACGGGAATTGTATTCTGCCGTCGCTAGATGTCACTGTATTGTGCCACAA
AGTCCAACAAGAGTCGTCACGTTTTTTAAATAATTTTACAATTAAACCATTAGCCGGTTT
CCCGGTACTGGTATCCAGAACATGTGTAGATAAAATCGGTCGAGACATGTTTGCGAGGCG
CGAGCTCAGGG
(3971 bp)

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