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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68433_c0_seq3
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_biotin--protein_ligase_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0031090 C organelle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
Transcript
Level		FPKM:2.15 TPM:3.75
ORF EntryO_BomoEE16224_complete:A_BomoEE_comp68433_c0_seq3
Sequence
(Nucleotide)
CACCTTAAGATATGAGTTCTAAGGCCTCAGTTTTTACAGTAAAACAGCTGCTCCACCTTT
CAAACTGAAACCTATTACTAAGGCAGAAATAAGTAGGGTGGTGGACTCACAAGACGTCCT
ACAACCAGTAAGTCGGTAGTAGGACGTCTTGTGAGTATTTGCCGGTGTTTTCATAATAAA
GCCACTATCTTGGTGTGTGTCACGCGTACTATTAGACAGAGTTCTATGCACAAGATCACC
GACTTATAATTATCATTTCAATTAATTATTATTCATTAATTATCGCACATATAATGATTT
GATTACAGTGTTACACAATCCTATTTCGAGTTCCTTTACATTTCAGATCAAAACGTATTT
AATAAAGTATTTTTTTTTGTTTTTCAATATACGGCAAAGCAATTTTTTTAGGTTCTTAAA
AACACTTACTTGGTTAGGTTTGACTCTGATCCTGTTTCTGATGATAACCAAAAACTGAGA
CATGGTGATATCTTCCGGGACTAAAAATTTTTTTTTGTCCAGTGTTGGCAGATTTCTCTC
TTTATGATATCGCTCAACGATTAGTGGTATTTTGGTGGGGAATTTACTCTTGATTGCCAT
TACTTCTTCTTTTCGGATAATAAATGGCTTTTTGGATTTGAAACACTGTTTCACGTTGTG
ATTAACATCGTGTTTGATTAATGTTGTTATAAAATTTAGCTCCATTGCGAGGGCACTGGT
CGCGTTATGTATCGCACGATGTATGGGCAAGTACACTGAACGCAGCGCGGACTGTAACTA
GCTAGTCGACTACCAACAGTACCAAACGAAGCCAACAAGTAAACAATATGGGTAGTTTTA
TCATTAGACTGGAACAGTGATTACAAATTTCCTTTTCTTTTCCGTTCGAGATTGTTTATT
TAATGAGGGATAGTTAACCTGTCCGTCAATTAGACTAAGCATGTTTGTTCTTTATTAATA
AGATTAATATCTGTTTGTTCTCTTTTTAAACGTAAATAATTATGATTTGTTTCCCTCCTT
TCTGTGGTACAATGTAAATAATGTGTGAATATACAGTTGGTTATCTATTTGAAGTTCGTA
AATGCATTATCTACTCCCAAAACAAATAGGAAAAGTCGGGACAAACGTTATTTCGATTCG
ATATTGTGTGTTAATATAGTAAAACAGAAACCGGTTCTCGTATCTCCCGCTGGAGTGCAA
CGCTAGGAAGAGAAAGATATGAATCTGGGTCCCTGCATGGTCTGCTATGGAACTAACCCA
TGTAAAACCATCATGTTAACCAAGGACTTCCATCCACATTTCGGGATCCATAGGCGAAGC
ATTTCGGAGTTGAACAATCAGGTTCTGGAGCGACAAGCGGTTCTGATCGGTCTGAGCATT
AAATGGGTGACCAGAAAAGCTTAAGACTGGTAATTAATATTACGGTGATTACCGAGACCT
ATAAGCACCACGACATGTACAGTCTTATTCATCTTGGAAGCCTCTTCTTGTCTCTCTATG
TTTCCGGTACTCGTCACACAGAAGATGCTCGGAAGAAATTCCAACTTATAGTCGCTATAA
ACAGTAAACAGTGTTACACAAGCAGATAGGAAACTCTGTAAACTGTTACATAACAGAACT
TAAGGGTGTCCCAAAAGAAACCATAACCTGGCACCGGGGGAAATACTCTCTTATGTTGAG
TAGACTCACGGCGAGAACTCTCCGCGTGAAGGCTCGGCGAGACTTGAAGAGAAATAGGGG
CACTGTTCACACTCACGAAACTCCAACACTCAGTTCAAAACTCTGCACCAATCCTAAAAA
TGCATATCTTTGTGACCTTCTTGATTACACAAATAAAACACGAATATGCAGTATGAAACC
AACACAGTGCATTGAAATCAGTGATTGGGTAACTTGTTCTGGAGGTATGCCACTTGGATC
CAGTGATCAGTCTCCAGTGACTGATTTAGATGTTGACATCCTTTTTGAATGTGAAATGGA
TCCTCATGAAGATAGCAGTCCAAATGTTACAACTTTAGAGTCAATGGGACAACCTATTGC
TTGGAAGGCTGGATCTCATCTGGCCATAGTCCTAAAAACTAACATTGAGCATCTCTCTGT
GATTGGATTTCAATTTGTTGGTGGAGAATTTGTGATAGATCATAACTTGCCAGTTGTTAG
GATACAAACCGTGCAAATATGTGGAGACCCTAATAAAGCTGTAGATGCATCAATGAGAAG
CTTAAGAACTGACATTCAGAACAATCTTAAGAATCCCTTAGAGTTTCAGTGGTCGGTCCA
TGCAGCATTACTAAGGAAACTATCAAAAGTTGTTGACATAAAGTCTGAAGTTAGATCCAC
CACAGCTCAAATGAATGGGAGTTATGATTCACTGCAAGAAACCACATCACTCAGTAGAAG
AAGTGTCACTTTGGCCGATGTCAGTGTCAACACTGGCAGGTCACTTTCCGCTGAAGATGA
CACTGACGGAGATATAGTAGAAAAAAGTTCTGATATCATTCAAAGTGAAGAAAAACCTAT
AGAGCAAATAGAGACTATACGAGTAGACACAAAAACAGATGACAAAGATGTGGTTCTGGA
GAATGTAACTGTTGAGATTCAACATAATATTACTCCAAAGAAGTCCAGCTTAAAACTAGA
CCTCAAGAAAGGAACAAGCCAACTATCCACATCGTTACTAAACATATCAAGTCAAATCAA
ATCAGTGACAACTCATAAAAGGATAGTCAGTACTACTGGACCAAGAAAAGTAATTCCTTT
AGAATCTACTTCAAAAGTTAAAGATGAACATAAGCCTAGCTCATCACAGCAGAGCACTCC
AAAGTCTGCAAAAACTTCCCGTCCATTAGTAAATACTAAATCACCAAATGTATTGGTTTA
TTCTGATAGTTTAGTTGCTAGAGATAATTTAGAAGCGTCATTGAAAAAAGTTTTGGACTG
CGATAGGTACACGGTGCAGAGCGTGTCCCGGGCGGCGCTGGAGGCGGGCGCGTGGCGGGG
GG
(3002 bp)

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