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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68415_c0_seq2
Scaffold_idBomo_Scaf125
NCBI non-redundant
(nr)		PREDICTED:_X-linked_retinitis_pigmentosa_GTPase_regulator-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007601 P visual perception
GO:0030030 P cell projection organization
GO:0032391 C photoreceptor connecting cilium
GO:0036064 C ciliary basal body
GO:0036126 C sperm flagellum
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042462 P eye photoreceptor cell development
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0044822 F RNA binding
GO:0050896 P response to stimulus
GO:0060042 P retina morphogenesis in camera-type eye
GO:0071482 P cellular response to light stimulus
Transcript
Level		FPKM:0.59 TPM:1.03
ORF EntryO_BomoEE16172_3prime_partial:A_BomoEE_comp68415_c0_seq2
Sequence
(Nucleotide)
AAGCGGCATGTTTGAGCTGTTGAGTTGAAAAATATATTTTTGTACAGACACAGGTGCCGT
ATTCACGTTCGGCAAATCTCACTTCGCGGACAACGAGCCGAGCCACTTCTTCATCAAGAA
CGATCCGGTGGTTGCTATTTCCTGCGGCGACGAACACAGCGCTGTGATTTGCCAGAATGG
TCGTGTGTTTGTGTTCGGAGCTAACACGTGGGGTCAGCTGGGCCTTGGTCATAAAGATGA
GGTGACGCGGCCTAGTTGCGTGAAATGGCTCAAACCGCAGCGAACAATGTTCGTTGCGTG
CGGACGAGCGCACACCGTTTTCGTTACAGAAACAAACGCTATATACACCGTGGGCTGCAA
CGATGAGGGGCAGCTCGGCACCGGCGATATGGAACACAGCACAGTTCCGCAAAGTGTCGA
ACTTGAGGAGCCCATAGTCGTGAAACAGATATCCGCTGGAAGCAACCACACGGCTCTACT
GACTGAGGATGGTCGCGTGTTTATGTGCGGCTCCAACTCCGAAGGGCAGCTCGGTTTAGG
CGAAGACTCACGATCCGCTGTACGGTTCACTGAACTCAAGTTCATGGAGAAGATAGCCTT
CATCGAATGCGGGTATTATCACACCGTCTTTATAACTACCAAAGGAGCAGTCTTTGTAAC
TGGCGACAACGAAAATCAGAAACTAGGTATCCAGAAAATAGCCACAAGCATCTACGTTCC
GGAAGTTTTGCCCATAAGTACTCCAATAAAGAGCGCCTGCTGTGGGGCTGCACACACGTT
CCTTCTGACAATGGATGAATCTAAAATATTGGGCTTCGGTTCCAATGAAAAGGGTCAGCT
GGGAATGCCTCGAGAGGTCGAGTTTGTTACTGAGCCTAGCGAAATTGACATGGACATTAT
GTTCGACGGATACCAACTAAAGTTGGTCGCCTGTGGCGCAATGCATACAGCTTTTGTAAC
TGACAACGGACTACTGTACACGTGCGGCGAGTCGAGGCATAATAAACTGTGTTTGGAAGA
TATCGACGACACCAACTCAAACGAGGTGGTCCCCAATCAATACACCCCTAAACGGGTCAC
CGCCATGAATGGGCACATCGTAGACAATGTGGCGTGTGGGGGCTGCCACACTCTACTTAC
GGCCACCAAAGGCTCGAACGCGGACTTCACGAACAACGATTTCAACATTATTAACGAAGC
CACCAGACAAATAACTCTCACCGAATTACCGCCCTTACAGAAAATACCAGCGATGAACAA
AACCGAAGAGAATCCGTTCTTAATTGAAGACGTGACAAACTCTAACGTGGACGACAAACA
GAAAGCGGATAACTTGAATGGAAACACGAACGAGGAATCCGGATCAATAGACTCGTTAGA
GGCCAACGTGAGCGGATCACACATCGTAAACATAAACGACCTTGAAATTGAAAATGGAAG
TACGCATGACCTGGCTGACCTAAACAAAGACAACATTGATCGTGTTTCCGACACAGGTGA
CTCGGCTATGGACGTGGTCGAAATTATGGACACGGTGCTTGACGATATGCAGACAAATGT
TCATGATTCTGTAAAAGAGGTCACCGATACAGTCCATGAGAAAAAGGAAGTGATTGAAGA
AGTAATTCACAAAACGGAAGCAAATGCAAAAGGGCTGCGCGATGATGTCACAAAGATTTT
GACCGTTCCTGATAAAGTAGTCGAAATTGCAAATTCCCCGCTGCCTAAAACACCCATATT
GCAAGAACTACTCCACGTTCCCGATATATCACAACTCAGTCCTGCTCACAGTAAGCACAG
TGACGAGAAAAGTGAAACAGGCCAGTCCGAAAACGAAACAATAACATGCGCATCGGATAA
ATCTAGTCCTCAAGCTGGGAAGACAGCTAAAACACAAGCCGTTATGCCGATTGTCAGGAG
CGAGGACCATATAGACTCTCATGTTGATGAAACCAATGAAGAATCAGATGTTGTTGTTAA
TAAATTGGAAGAGAAGGGTCGATTTGCGAGGATGTTTCAGTCAATACGAGACAAGGAAAA
CTCTTGTATGGGGAAGGGCAAAGTCATTGAAGAGAAAGTTGTTGAGACGGTTCACAAAGG
CATCGACAACGCCGAAGAGTCGATTCACAAAGTTGAAGAAACCGTTGAAACAGAGATACG
GAACCAGACAAACTCTAGAACCTGCACTATATTGTAAAAACGGCTACATCATGTATGGTT
TTGGCAATAAAATCTTACTTCTTAAAAAAAAAA
(2253 bp)

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