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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68413_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		clathrin_heavy_chain_[Bombyx_mori]
Ontology
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007291 P sperm individualization
GO:0007594 P puparial adhesion
GO:0008021 C synaptic vesicle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030129 C clathrin coat of synaptic vesicle
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0030135 C coated vesicle
GO:0030136 C clathrin-coated vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032051 F clathrin light chain binding
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040008 P regulation of growth
GO:0045451 P pole plasm oskar mRNA localization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0071439 C clathrin complex
Transcript
Level		FPKM:29.29 TPM:51.09
ORF EntryO_BomoEE16162_complete:A_BomoEE_comp68413_c0_seq1
Sequence
(Nucleotide)
ATTATATGAGCCATGCTATCAAGTCTTTCAATTTTATTTTTGGAATATTTTGATTGCATC
TCTAGACTACTATTAGATGCGATCGCATCATAATGAATGCAGAAATTGTGATTGAAGTTT
ATATCATGCTTTCTCTTTCTCTTTTGTCTACCATTTCATTCATTTGTATATGTGGCATCC
GAGGGTGTACATTATTCGTCATATTACTCCGAAACAGCCAAATTTATCCGCCCCTATTCT
TCTTCATGTAGAATTCTAGAAGTTAGTTCGCGATTTTAAAAGGGTCGCCCGTTTTTTCGT
TTTCGGTTTGTGTAGGACGGAGTGATCAATAAACATGGCGCAAGTATTACCGATACGGTT
TCAAGAACATTTACAGCTTACCAATGTGGGAATCAATCCTGCTTCTATTTCTTTCAACAC
TCTCACCATGGAATCGGACAAGTTTATCTGTGTTCGCGAGAAGGTTGGTGAGACTGCAGA
AGTTGTCATTATTGATATGGCAGATCCAACAAATCCAATTCGACGACCAATCAGTGCAGA
CTCTGCTATCATGAATCCAGCTAGTAAAGTCATTGCTTTGAAAGGCAAAGCTGGTGTTGA
AGCTCAAAAAACACTTCAAATCTTCAACATCGAGATGAAATCCAAAATGAAGGCGCACAC
CATGACCGAAGACATTGTTTTCTGGAAGTGGATTTCACTGAACACACTCGCTCTGGTCAC
CAAGATGTCGGTGTACCACTGGTCGATGGAAGGCGACTCGACACCCGTAAAGATGTTCGA
CAGGCATTCGTCGCTTGCCGATTGCCAGATCATTAACTACAGGACGGATCCGAAGCAACA
GTGGTTACTGCTGGTCGGTATTTCTGCTCAACAAAACCGGGTAGTCGGAGCTATGCAGCT
GTACTCTGTCGAGCGCAAGTGCTCTCAGCCTATCGAGGGACACGCCGCGTCATTCGCCAC
ATTCAAAGCGGAAGGCAACGCCGAGCCGTCCACTCTCTTCTGCTTCGCTGTGAGGACTGC
CCAAGGCGGCAAACTACACATTATTGAGGTTGGCCAAACGCCGGCCGGCAACCAACCATT
TCCGAAGAAAGCCGTCGACGTGTTCTTCCCAGCGGAGGCGCAGAATGATTTCCCAGTGGC
GATGCAAGTATCGCCGAAGTATGACGTCATTTACTTGATTACCAAATATGGATACATTCA
CATGTACGACATCGAGACGGGAACGTGCATTTACATGAACCGTATCTCGTCGGACACGAT
CTTCGTGACAGCGCCCCATGAAGCGACTGGTGGTATTATCGGTGTAAACCGCAAAGGTCA
AGTGCTATCAGTGACGGTAGAGGAAGACTCAATAGTTCCGTACATAAACACCGTGCTCCA
GAACCCCGAGTTAGCGTTACGCATGGCCGTGCGTAACAACTTGGCAGGTGCTGAAGAACT
GTTTGTGAGGAAATTCAACATGTTGTTCACGAATGGACAATACATTGAGGCTGCTAAGGT
AGCAGCTATGGCACCTCGAGGAATCCTCCGTACACCGCAAACTATCCAGCGTTTCCAACA
AGTGCCCACGCAGCCAGGTCAAAATTCGCCGTTGTTGCAATACTTTGGTATCCTCCTTGA
TCAGGCGCAACTCAACAAGTTTGAATCCCTTGAATTGTGTCGTCCTGTTTTATTGCAAGG
GCGAAAACAACTGCTCGAGAAATGGTTGAAGGAAGAAAAATTGGAGTGCTCAGAAGAACT
CGGAGATCTTGTAAAGCAAGTAGACCCTACACTTGCTCTCTCAGTTTACCTTCGTGCCAA
CGTCGCCAGTAAAGTTATTCAGTGCTTTGCTGAGACTGGGCAATTCCAGAAAATTGTATT
ATATGCCAAGAAGGTTGGCTACACTCCAGACTACATTTATCTTCTTCGTTCAGTGATGCG
TACTAATCCTGAACAAGGGGCGGGATTTGCAGGAATGTTAGTCGCCGAAGATCCCCCTCT
AGCAGACATCAATCAGATAGTAGATGTTTTCATGGAACAAAATATGGTGCAACAATGTAC
AGCCTTCCTTTTGGACGCTCTGAAGAATAACAGACCTGAGGAAGGACCTTTACAAACTAG
GCTTCTAGAAATGAACTTGATGTCAGCGCCGCAGGTAGCAGATGCGATCCTCGGCAACGC
GATGTTCACGCAGTACGATCGCGCGCACGTTGCTCAACTCTGCGAGAAGGCTGGATTGTT
ACAACGGGCGCTTGAGCATTACACTGACTTATATGACATCAAGAGAGCTGTTGTACATAC
TCACCTTTTACCAGCTGACTGGCTTGTCACATACTTCGGAAGTTTGTCTGTAGAGGACTC
CCTTGAATGTTTGAAAGCAATGCTTCAGGCTAACATCCGTCAGAATCTGCAGATTTGTGT
CCAGATCGCCACTAAATACCATGAGCAACTAACAACAAAGGCTTTAATTGAATTGTTTGA
GAGTTTCAAAACATATGAAGGGTTGTTCTATTTCCTGGGATCAATTGTAAACTTCAGCCA
GGATCCAGAAGTCCACTTTAAATATATTCAGGCTGCATGTAAGACTGGTCAAATCAAGGA
AGTGGAGCGTATCTGTCGCGAATCCAGCTGTTACAACCCAGAGCGCGTGAAGAATTTCCT
CAAAGAAGCAAAGCTTCCCGACCAGTTGCCTCTTATCATAGTTTGTGATAGATTCGACTT
TGTTCACGACTTGGTTTTGTACTTATATAGAAACAGTCTTCAGAAATATATTGAGATTTA
TGTACAAAAGGTTAATCCTTCTCGTCTGCCAGTCGTAGTTGGTGGCTTGTTAGATGTTGA
TTGTGCTGAAGACATCATTAAGAACCTGATCTTGGTTGTTCGGGGACAGTTTTCGACTGA
TGAATTGGTTGCTGAAGTGGAAAAGAGGAATAGACTGAAACTCCTCCTTCCTTGGCTGGA
AACAAGAGTACATGAGGGCAGCAACGAACCAGCCACACATAATGCTCTAGCCAAAATCTA
CATTGATTCCAACAACAATCCTGAGAGATTCCTCAGAGAAAATCAGTGGTATGACTCCCG
CGTGGTTGGCCGCTACTGCGAGAAGCGCGACCCGCACTTGGCGTGCGTGGCGTACGAGCG
CGGACAGTGCGACCGCGAGCTCATCGCCGTCTGCAACGACAACTCTCTCTTTAAGACCCA
GGCTCGCTACCTGGTGCGCAGGAAGGATCAAGACCTCTGGCTCGAGGTGCTCTCTGAGGA
GAATCCTTACAAGAGGCAACTTATTGACCAGGTGGTGCAAACAGCTCTTTCTGAAACCCA
AGATCCTGAAGATATCTCTGTTACTGTAAAAGCTTTCATGACAGCCGACCTACCCAACGA
ACTCATTGAGCTGCTTGAAAAGATTGTTCTTGACAATTCTGTGTTCTCTGATCACAGGAA
CCTTCAGAACCTTTTGATTCTTACTGCTATCAAGGCGGACCGTTCTCGTGTAATGGAATA
CATCAATCGTTTGGATAACTACGACGCACCTGATATCGCCAACATTGCTATCAACAATGA
ATTATACGAGGAGGCATTCGCTATCTTCAAAAAATTCGATGTTAATACTTCTGCTATACA
AGTACTGATTGAACAAGTGAAAGATCTCGAACGTGCCTATGAATTTGCCGAGCGATGCAA
CGAGCCTGGTGTTTGGTCTCAGCTCGCAAAGGCTCAACTACAGCAAGGTCTGGTCAAGGA
AGCCATCGACTCTTACATAAAAGCGGACGATCCCTCCGCTTACATGGACGTTGTCGCTAC
TGCTACCAAGCAAGAGTCTTGGGATGATCTTGTTAGGTATTTGCAGATGGCCCGGAAGAA
GGCGCGCGAATCGTACATAGAGTCCGAACTGATCTACGCTTACGCCCGCACCGGTCGCCT
CGCCGATCTGGAAGAGTTTATCTCTGGCCCGAATCATGCTGACATCCAGAAAATCGGTGA
CCGTTGTTTCGACGATAAGATGTACAACGCTGCGAAACTCTTGTATAACAACGTCAGCAA
CTTCGCTCGTCTTGCCATTACTTTGGTGCATCTGAAAGAATTCCAAGGTGCCGTGGACAG
CGCGCGTAAGGCCAACTCTACGCGTACATGGAAGGAGGTCTGCTTCGCGTGCGTGGACGC
CGGTGAATTTAGACTCGCGCAAATGTGCGGATTGCACATTGTAGTACATGCTGACGAACT
TGAAGACCTCATCAATTACTACCAGGACCGAGGTCACTTTGACGAGCTGATCAGCTTGTT
AGAAGCTGCCTTAGGGCTGGAGAGAGCTCACATGGGAATGTTCACTGAACTCGCCATCTT
GTATTCAAAATACAAGCCCGTGAAGATGAGGGAGCACCTCGAACTGTTCTGGTCACGCGT
TAACATTCCCAAGGTACTCCGTGCTGCTGAACATGCCCATCTTTGGTCAGAGCTGGTATT
CCTGTATGACAAGTATGAGGAGTATGACAACGCTGCTCTCACGATGATGCAGCATCCCAC
CGAGGCTTGGCGCGAGGGACACTTCAAAGACATAATTACTAAAGTCGCGAACATGGAACT
GTACTACAAAGCTATCCAATTTTACCTAGACTACAAGCCACTTCTCCTTAACGATCTACT
GTTAGTACTGGCCCCACGCATGGATCACACCCGAGCAGTTAACTTCTTCACCAAAGCTGG
TCATCTGCAACTAGTGAAGGCCTATTTAAGATCAGTGCAGAGTTTGAACAATAAGGCTGT
TAATGAAGCATTGAACTCGCTGCTTATTGATGAGGAGGATTATCAAGGCTTAAGAACATC
GATCGACGCCTTCGACAACTTCGACACTATTGCGTTAGCGCAACAGTTGGAGAAACACGA
ACTTACAGAATTCAGACGGATTGCCGCCTACTTATACAAAGGTAATAACAGATGGAAGCA
AAGCGTGGAGCTCTGTAAGAAAGACGCTTTGTACGCCGATGCAATGGAGTATGCATCGGA
GTCGCGCCAGCCCGAGGTCGCCGAAGAGCTCCTCAACTGGTTCTTGGAAAGAGATAATTT
CGAATGTTTCTCGGCTTGCTTATATCAGTGTTACGATCTCTTGAAACCCGATGTTGTCAT
CGAGCTCGCATGGAGACATAACATCATGGACTTTGCCATGCCCTATCTTATTCAGACAGT
TCGCGAGTTGACAACTAAAGTAGAGAAGCTTGAAGAAGCAGACGCCAAGCGAAGCACCGA
GAATGCGGAGCACGAAGCGAAGCCCACCATGATAATAGAACCACAACTCATGCTGACTGC
CAGTCCATCGATGCCGTACGTGGTGCCGCCCCAGCCGTCGCAGTACGGGTACACTGCGCA
GGCGCCCTCGCCCGCCCCCTACCACGGGTACGGCATGTAGAACGCCGCCACCCGCCTCGT
CTGGGGGAACCTCGCTCCCTACTGAGACAGGCGCCCTCCCACACACCGACACTACACCAC
ACGATTCGAGGCCATGACACTCAGAATGTCCTTATCGCCTACACAAAAACTTCAGTCTCG
ACAAAAAAATATAAATTATGTTGTTAAGTACTTGTAACTTTCACACATTTCCATCTAACA
ATATACCGCTATATATGGAGAACCTTAATTAATTTTAAACATTTATGGCGGTAGTACTTT
CTATGTTTGCAGTAGGTACATTTTGCTAAACAAAATTATTATATTGAGAGGAATACTCAT
TTAGCTGATTTAGCTCTCGAGCCCTCCTCAGAACGAGATTTACGTGAATATTTCAATAGC
GACCAGATATAAACTTATATATATATAATAATATATGCTGTGCCCTCACAACCTTCGTAA
TTGTTACGTAAAATCCCTTGATGATTTAATTTTTCTGCGATGCTGTGGCCTAATCTTTCA
TTTATATTAACATGATTTCAAAATTAATCTGTCGGTAAAGCTGAGGGGTGCTTTCTCTGC
TGCTTCTTCTGCTGGTCCTTTGAGAATCATACAATTTAGCGTGTACAAATTATATTAGTA
TAGTCGCTAATCGACTATGTATTGTTAAAAGTGCTTTATTTTTAAATAAAATGAGTTTTC
AAAATATAAAGCTTCTTAAACAGATACTATAATTCAACCGTATGTAACGTGCATTCTGCG
AATATAGAGATATGTATACTAATATTCTAATTTTGCAGTTTCTATAAACGAACGTAGTTG
ATTAAAAAAATGTATAATATTTAAACTAAAAGATTCCATGTGATAGATATTGTTGAAGAT
AATACAGCCGAAGATATATATTGAATTATTTCAGTGAAAGCTTGGTTCGCCACTACGTAA
ATAAATAAGTAAATTAATGAATTTACTTATGTACATAATTGGCGGTACTTTATCATTGCT
TTCTCACATCTGAGAATTACATTAAATTATTACATAAAATATAATCTACTTAAAGATAAT
TTATATTCATTGTAATGAAACAAGAAATCATTTTGGTCGAACGAAAATTAATTAATATTA
TATTCTCTACCGTGCAATAATTTCAGTTCTCTCATAAAGAAGAGATGCTTAATATATTGT
AATATGTATATAATGTTTACAGTTTTGAGCCAGTTGAAATTAAAAAGGAAAAATGTTTAT
TATTCGATTATGAATATTATTTAGATATGATTAGGTTTAGTTTTAGACGGAAAATAGTGG
TATGATGTTAATTTTTGTGTAATGTATGTGTGCGAGTGTGTAAGCGGACCGCACGCACGT
GATCACCTGAATTTGATGCCTTCACTTAGATAGTTAGAACGCGTATAGAGGACGCGTTTT
TTTTTCTATTTTGTTAATTTTTTTTGAACACAAGGTCTAATTCCTCGAGTTATGGTATTA
GTAATCTAAAGTTTATCTCGGTTCCGCATACAGTTATATAGTAATAACCGTATAGCCGCG
AGTCGCTAATGTAGAACGTTGAATCATTCAAATAATCATTCCTGTAAAGAAAATGAAGTA
ACGAAATAATCTATACATTGTTGCGAAATGTTTAAAACCTTCTTTCGAAGATTTATAGAG
AATTATCTAAATGTAGAAGGAAAGTTCATTGTTTAATGGTTAGAATTGTATTTATTCATG
TATGATACTGTTTCCCTGAATTTTATTATTGTAATAAGAATATAATAATGAAGAAAAAAA
ATGACTTTTATTGTTCTAAGACTTGAGGTTTAAGAAGAAGTGTTAATCGCCATAAGTATT
CCTTAATGTTTTAGTTGAATTATAAATATGATGTCGAAAAAAAAAA
(7246 bp)

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