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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68317_c0_seq3
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		Poly(U)-binding-splicing_factor_half_pint,_partial_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:30.53 TPM:53.24
ORF EntryO_BomoEE15901_complete:A_BomoEE_comp68317_c0_seq3
Sequence
(Nucleotide)
TGTTTTTTTTTTTTTTTTTACAAAAAGTTAATCTTAAGTTTATTTATTATTATTTAGTAG
AGTAAGTGTATGTATGCGGCGGCGCGGCTACCCGGAGAGGTCTCCGTGGTCGAACAGGTC
CTGGTCGTAGAGCGCGGCGCGCACGGTGCGCCCGCCGAAGTACCGCCCGTTGAGCGCGCC
CGCCGTCGCACTCGCCTCTTCAGGTTCAGCGAACTGTACAAAGATCTTAACATTAGCGTG
CGAGGGGTCGTCGTCTTCGTTCTGTCGCTCGTTGTAGATCACGAGCCGCTCCACACTGCC
CCACTTCGAGCATTCCTCCTGGATTTCGTGATGTAGCGCCTCGTCCACCTCGTCAGCCGA
CACCATGTTGCACAGCAGCACGGTGCGGGAGGCTCGACGCCGCATTAGCCGCTGCATGAC
GAGGTGCCGCGCTGATTGACCAGATATTGAAAGGGACTCCTGCTGCTGCAAGGTGTCGGG
TGACGCATCCAGTAGCTTCTGCTGTAAGGCAGCTTGTTGCTGTCCTTCCGCTTCCGTGAG
CGTGGGGGGTGCGGCCGGTGCGGGGGGAGGCGGCGCAGGGGTGGGGGGAGGTAGGTCGGC
GGGAAGGGGGCCGACCCGTGGAGCGGGAGGGATTACCACGCCCGGAGGAGGGATGGCAGC
CGGCAGTACTCCGGGCAGGGCCGCCGGGATCACTCCAGGTAAGGCTGCGGGCAGCACGGC
CGGGATGGCGGCGGGCAGCGCGGCGGCGAGGGTGGGCAGCGCGGACGGCTGCGGCGGCCC
GGCCAGCGCGTTGGGCGGCGTGATGGCGCGCCCCACCCGCAGGTACTGCCCGCCCAGGTC
GAACAGGTTCATGGAAGCTATGGCCTCGAGCGCCGCGGGCAGCGTGGCGTACTCGATGAA
CCCGTAGCCCTTGTGCTTGTGTTGGGAGGTGCCGTAAGCCAGTTTGCAATATGTGATCGG
TCCAAATGCTTCGAACACGTTCTTGATGTCGTCCTCAGTTAATTCCGGGTGTATGGAGGC
GACGTATATCCGATTGAACTGTTTAGCTTCCTCTTGAATCTCATCAATGACTGCCTGCGC
CTGAGGCATGTTGGAAGGTCGCCCGACGACTTTAATGTTCCTTCCTCCCAGCATGACGCC
GTTCATCTGTTCGAGCGACAGCTGCGCGGCCTCCGGTATCTCGTACTCCACGAACGCGAA
CCCCTTGTGCTTCTGCGTGACGGGGTCCCAGGACATGTTGATGGACTTGATCGGCCCGAA
CGGCAGGAACGCTTGTCGGATGGTGTCCTCCTTCAATTCAAAGGATATCGAACCCACGTA
CACCCTGCACATGAGCGCGAGGGCCTGCTGCCGCTGCACCTGCGTGCGCTGCGAGGCCAT
CTGCTGCTGCTGGTGCGCGAGGGTTTGCTTCATGAGCACCATTTTGATGCTTTGCTCCAT
GGCGTATTTCTTAGCGCGTGCCACGGCGTCCGCTTGTTCCGACGACAGCCGCGGCAGCGA
GCCGCCCAGGATGGCCGGCAGTGTTGCGCATTTCGCTCCTGGCCCCGTAAATACGTCTCC
TTGCTGTTTGAAGTCGTAGATGGGGGCGACGAAACATTGGTCGTGGCGCGTGGCAGCCGG
CGCCGCTCCCGGCCGCAGTCAGTCCTTAGCATTTACCTAACTTATATCTAGCCTGAAACA
GAAAGCAGAACAACGGATCACTGAGCGAGTGAACGTGTGTCGGTCGTGCGGTGTGCGATG
GCGCGCGTCGGCCGACCTCTCTGCTCCGCGGGTCCTGCAACAGCGAGCACAACCCAGCGG
CGTTAGCGGGCTCCTCTACAAATACCGGTCTTCCTACCTCGGGGTGTCGTCGTCATACTT
ACCAGGAGCGGGGGCGGGGGCTGCGGGGGCCGCGGCGGGGACCAGTGTGGTCAGCAGTGG
TACGGCCGGTAGGGGAGGCTGCATCGTGCCGCCCTGCAACATATCCATAGTTGTTTTAAA
ATTATAAATTATTAACTGAAAAATCAAATAACTGAATTAGAATATGTTTAAGCGACTAAA
TTATTATAAAATTCATTAAAATACGATTTCAACACAAGTAACGCGAGAATTTTGACATTG
AACGAAGTGACGCGATATCAGACACCAGCGTGTAGTGACAGCTGACAACTACAGTAGCAG
TAATTCCATTTTTTCAATTGAAATGGCAAAGGTATCACAACATACTACCTACTCTTTTGT
ACAATATTCTGTTTCATGAAAAATTAAATGGAG
(2253 bp)

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