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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68308_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		mRNA-decapping_enzyme_1A_[Papilio_xuthus]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0042802 F identical protein binding
GO:0043085 P positive regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:1903608 P protein localization to cytoplasmic stress granule
Transcript
Level		FPKM:19.50 TPM:34.00
ORF EntryO_BomoEE15868_complete:A_BomoEE_comp68308_c0_seq2
Sequence
(Nucleotide)
TGCGCATGTGAGTGACCGGTGTTACTGTACTAGGTTTGTTTTGTATCAAAGAGTAAATTA
AAAGAAAAAACAAAGCAAAAGTATTATTTCAACAAATTTAAGACAATACCCACATTTTTA
ATAGAATTAAATATTTTGTTTGCTACCTGCATAATATAAAATATGTACATCCTGATTATG
TATGTATACTAGTTTTAATTTTTCTATATTCTAGAATTCCTAGTTTTTGCGTACGAATAG
TCTACCTGAATCATTAAAAATAATTAAATACATCCAGATTTCAAAACGTAACCAAAATGG
CGAAACTGTTCGTTCTTGTCATTTTGCTGTGATGCTTGTTCGCTGATCAAAACTATTTTA
TTATTAGTAATATAAAAAATGGCTGACACCGGGTTACGTAGTATGAATTTCGCTGCATTA
AAGCGGGCAGATCCATATGCTCGTGAAATTGTCGATAGTGCTACCCACGTTGCCCTTTAC
ACATTTGAAGAGAACGAATGGGAGAAAACCAACATTGAGGGTGCTTTGTTTGTGTACAGT
AGAAATGGTGAACCATACCACAGTTTAGTGATTATGAACAGGCTGAACACTAACAACCTA
ATAGAACCAGTGTCTAAAGGAATTGAACTACAGTTAAAGGAGCCGTTTTTACTATATCGT
AACGCCAAGTGCCGCATTTACGGTATATGGTTTTATGATAAGGACGAGTGCGTGCGAGTG
GCCACGAAGTTGAACACATTAGTGAAAGAGTCCATAAAACAGTCGCAAGGCGAAACCATG
CCACAGAATTCAGTTTACAATTCGTCTACAACTTCAACTCAATCTATAGATATCTTCAGC
ATGTTGAGTAAAGCGCAAGACGATTTCAATTCTAATAAAGGTGTTGCTGGAAACAAATCC
GAATCGACGCCGGCCAAAGCGCCTGACATGACGTCGCAAAGTGTAATGGATTTCTTTGCA
AAGGCTGGGAGTGGAGCATCGGCTCAAATGCCTGCAGTGTCTTCATTGCCCTCACCAGGG
ATATTCGGTCCGCGTGCCACTGATTCCAGAGAAGTACCACAGCTTTTACAGAGGCTCATG
AGTAACCCTGCACATTCAGTAGAACATATTGAGAAGCAACAGCGATCTGTTACTCCTCAA
GAAGGGCAAAGCTCAAATGGTAATTCTACACTAGATTCTGGTATCAAACCAAATTGTATG
TTCTCATTAAAGTCAACTCCTTTGGAGAAGCAAAATCAAAGGATACCAGGATTGAAAAAA
GCTCTGGATAGTAGTGATGCTAATGGAATAGTCACCATGGAGAATGAACTCAATTTGATG
CACTTATCTTCTCCCAAGACAACATCGCCATTAGCTGCATACTTGAATCAATCTCAAGAC
ATAGGACACACGAAACCGGCGCTGATGCCCCCCACAATGTTCACTGCAAGTTCAGGTGGT
GATGTCCAGCCATCACCGCAGCCACTCACCAGGAATCAACTCCTTCAGGCCTTTAATTAC
TTACTCAAACATGATGCAGATTTTGTGAATAAACTTCACGAAGCCTATGTCAAATCGTTT
TCAGAAAAAGCATTTTCTGTGTCATAAGATAATCTTTTATGACTGTGGCTGATGTTGCCA
GCCATTATTATGATGTACAGTTGTAATATGAAGCATAATCTCTTTAAAAATGTTGTGTAG
AACTTGTTGTTTTTTAGTGACTTACCATTTGGACAGAGTATTTTAAATAAGTTTAAAAAT
ATGCAAACCAGTTGTCACTTAATTTTATATAGTGGATGAATTTTAGTGACTCCAGATGAG
TGATATTCAGTCAGGTCTTTAATGACACAAATGTTTGTGATATTTTTAGTTACAAGCTAA
TTGGCTTCAGCTTGATGTTCTGTAAAATCAAACTCATCCAACATCCAGTTACTGTTCTTA
CACATCCATCATACTTTTAATGTTCTTCTTATCACAAAAAAACGGACAATACATAACAAA
GTATACACTTTTCTAAAATATATTAAATCTCGTAGAGATATTCAGCTTTACGTGTTGTTG
CAATTGTAATTTTCAAAATATAAGAGACTTGCCAAGCTGCAACATTACTTGATAGGTGTT
TTTATGGACTGTAAAAAATATTTTCTATTCGTTTATAAAATATGCCTTATGTTACATATA
GGAATCAGTTTACTATATTTCTGTTTAAGTAATGTTTTTCAAATCATATTATACTCATTT
AAAAAATTTAATGATGTAAAAAATTGAATTTCCACACATCTAACTCTTACGGTATGCTTG
AAAAGAATTTAATTTAAATAAAACGAAAGACTTGAGTACAGATTAGAAAACTAAATATAT
GTAAAAATAAAGATTTGTTGCAATATACTTAATTTTTATAAACTTATTTAGTTTTAGTGT
AATAAAGATCCTGAGACCTTTTTTCATAAGACCAAGTATTTACTACAAGTTGAGTACATC
CTTTCTTTATTCAAAAACAATAATCGATAAAAAATGCCTAGTTTCTATATGAGTAAGAGT
GCCAGTGCAAAACATATGGCATGGCACTGGAAAACCAAGTTACATTTGCAAGCTAAGAAA
ATGTTAAACTATATAAACTCAATGAAACAAGTTAAGTAGAATGCTAAAATTTATTTAGGA
GTTTGTTCTAAAGAAAGAACATTAATGAATTTCAACAAAACAATATTATTGAACAAATGA
CATGTTTGCTTTGAATTTGTTTCTGGGTGGTATCTTGATTTTTGATAACTCTTGAAGTTA
AAGATTATTATGATTTCAAAACAGATTTCGTACAAGAATGTTTTTAGTGACTTTCATGTC
TTTGTTCTTGCATAGTAATCTTATAACTAAAATCCCAATAAGTTAGTAATTAAGACACAG
GTGGATGTATTTTTTTTGTTTTTCACCATCCACAAATCTACAACCGTGCACCTTTCTTGG
GCTTGCAGTGGATAATTTTCACACCTGCCATTTCTGATAGTCAATGAATCAGAAACTTGA
TGTTGCCTGTGACCTTGGCGTACTGCTCTTGCCTTTGGACAAGAATTGTCTTCTCAACAG
ACTTATATGCTTTGGTGAACTAAAATAATCCGACGTATTGATAAGTGTTGCTTTTATTTT
ATAAACCAAGAAGCTATTTTAATTAATTCTATTACACATTACTCCGTTTTTTTATTTAGT
TAACATAGCTTTGTTTATGTTTGGATTAGCTGATCTAATTTTAGTCAAAACCTCCATATG
AAGTTGAAAATACTTCAAATTATATTGTAATACTGACCTCGGCAAATTTGAAGCAAACAT
GTATCTTACTATACATTTATATACTTCAAATTTCAATTTCCAAACATATCTTTTAATTTC
AAATATTTTTTAGATTCATTTAATTATTATTTAGGTTCTATCTTGTTATTTTAAAAGATC
GACTTAAATAATTTGGATTCAACATTTAAAAAGCATGTATTTAATATAAGAATACGTCCA
TATTCACAAGACTCATAAGATGGCCTACAAAACTATATTTTGTGATCTGTATCATGCATC
AGAACAGAATGCATTGTTTTTTGAAAAACAAAAAAAAAGATATTCGATATTAAGGTTTTT
GTTATAGCAGAATTTAGTGATAAAACCTGTAGGTACCTAACTTTTCAAATTAGTGTGTTG
AGGGAATTTCAAAATATAAAATCTTCCCAATTACAATTTTTTTAAAGAACCCGATGTAGT
TATTTTGTAACAATTTCCCTTTATTAATTAGTTAAAAAAAATCAATTGTCCGATTCTGTT
AAAAACCCATTTGAAAATGTTAGTAGTGTTCAATTTGACATATTCAAACTAGAAAGATGT
TATCAAAATCGTTCAAAATTAAAGGGTTCACTGAGATTGAAAAAAAAAAAAAAA
(3894 bp)

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