SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68235_c0_seq3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_2_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030552 F cAMP binding
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0043025 C neuronal cell body
GO:0044316 C cone cell pedicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0071320 P cellular response to cAMP
GO:0071805 P potassium ion transmembrane transport
GO:0072718 P response to cisplatin
GO:1903351 P cellular response to dopamine
Transcript
Level		FPKM:0.21 TPM:0.37
ORF EntryO_BomoEE15742_complete:A_BomoEE_comp68235_c0_seq3
Sequence
(Nucleotide)
GTTTTCTTCATTCTTTTAATGCATTTTCTCTAATTTGTTTACAGCGATGAGCACTTTTGG
TGAAAATAGATAATTACCAGAAATTATTTTTAAATAATTAACAAATAACATTTATAAATT
AAAACTCTTTTTTGATATAGTAATAGATTCTCTTTCATACAATCATTAGTTTAACTTCAC
AATCAAAAATAGATTTCTTCTATAAAATTCATATAATTTATAAAAGCATTAATGTTAGAT
TGATAAAATAACAATAAATAAATGCCTCTGGGAATGAAACGCAATAATATTTTGTTATTC
TCTTTGTAGATAAATTGACAGATAATCTTTCTGCTATGATCAATATATAAATCTTATGAG
TATATAAAGTATCTATTGGTGTTAATTGTCGATCTGAACTAGGCTGCGTTTTTTCTACAA
AGAAAGCTAATGCATATTGGTTCTTCATTCATTAACTATATTTTGGCTAAAGTTCAACAT
TCGCAAAATCGTCATTTACAAATTTGTCATGACACTAAGTATTAATCAACGATGATGATT
TCGCGTTCCGGGACGTCCGCTCCGCGACCCTATTCCCGAGCTTCGCTAGGATATGTCGCT
CATTAAAACTATTCCCCTAATTATATAAGTGTCTACAGTCGTGTGAATACAGGCAAGCCA
TATTGATAAGCAATCGTTCCAGTTCCGAGTGAATCGAACGCGTATAGTTGGAGTAATGGA
ACGTGAAACTAATTTCCGGTGTCCTGAAGCACGTGTTGCATGAATTCGAGCTACGCTAAT
GTCGGTCGCGGAGAGTACGGCCGAAGCGCGTGCAGCTTTAGCATTCCCACTATCACATAC
GTAATTCGTCCGAATTTGTTAACGCTTTGGCCTACTTATTACTACTAAATGATCACTATC
GACAATAAATTATTTTCGCCTACAATTAAAATGAAATTATGAAGTTTAGTGGTGCATTGA
GATAAGAGACGTCCGTCTCGCGCCGCGAGAGCACGGATTAATTGACTGAACCGCTCGACC
GAACGCCCCCTAGACTTACGTAAATTTATCGAACCGCATAAACGCGCAAACTCACAATAA
AATATATTTACATCAGAAATAATTCTCGAAACTTCCGAAGCTCTAACTATATCACCTCTA
CTTAGGAAACCGAGATATTAATGCTGGCGCTAATTATGCCCTTTTATATCGGTGAATATA
ACTACTTATAATTAAAGTTAAACAAAGCAACGTATGCTATTTGAATCGTATGTGAGAATT
AACTTGTGCGTCACATGTACAGCGTGAGATTTTTGTGAGGCGCAATTAGATATATACTAA
GGAATGTTTCCTTGTAATTCTTGTGTTTAACGTTTGTTAAATATTAGAAGGCTGCTGTTC
CTTTTCTGTTTAGTCCGCAATTGAAAGCTTAACTGATAATCGAAACAAGTTAACTTAGTT
GTAAATCATAATTTTTAGCCGAGAATGCGTCACAAATGTCACCTCCCCACGTACTCCGCA
ACGATTCAATAACACTGTTACACAGTAAAATAAAATAATGGAACGGAAATCGATGGAACA
ATATAAAGTCTCTGAACCGTGTTATTCAGGCACGTTGATTTATTACTATGCACTTATATC
CCACCGTTTCGCCATCGAATACCCCGTATCAACAAAGATCAATTTCAAACGTCATTACAT
GTAGCATAAAATATTGATATTTTTAAATTTCAGTCTAGTCTAAATCATTATTTTTTCTTT
TAATAATGGCAAGGTATCTATAAAGATCTCCCTATAAAGATTTAATAGTAATCGTTTTTT
TCAATACACAACAGGTATACATTTATATCTATACAATCGGAATACGTCACGTATTCATCG
ATTCCTCACAGCGTCAATGATATAAAATTTAACCTAAATTATAACACAGGAGAATTAAGT
ATAAGATCACAAAATGAGATTCAAGGGGCGTCGCGCGCGGCGGGCGGCCGGCGAAGTCGC
AGCTACTAGAGTCGAGTCTACGCTACAACTAGCGAGCGGCCCTCGCACTAAGCCTAGTGT
CGGGAGCGTCGCGTCGCGTCGCGGCGTGCCGCGGCAGGCCTAGCAGAGCGTGCGGCGTCA
GGGTGCGATGCCCGCGTCCGATTTGTGGAAGGCGGCTCCGACCGACGACAACGACGGCGG
CTGAGCCTGCGTCGAACTGAAGTCGTGCTCCGACTTGGGACGCGGCAGCGCAGCCGCTAC
GCCCAGCCCCGGTAGGGCCACACCTGCCATGCGACACGATGCCGCCTGCAGCGGTTGCAG
TGCTAGCCCCAGCGACCTCTCCGACAGTCGTGCCACACTGTCGTCTGACAGACTCACGTG
CTCTGCTTCTGCCGCGAGAGCGTTAACCACTGCGTTGATCGTGTTCCCTTCGGATGTCGT
GTCGTCTTCGCGGTGCGCCACCAGATTCGGGTTTTTGCCGATCTTGTTCAGTCGTTCGGC
TGCGACACTTTCCATCGTGCGTCGCATCAACGGATACTGGTCTAGCACGGCGTTGAAATG
ATCCACCGACAAAGAGAACAGATTGCAGTACGTCTCGGCGCGGACGGATGCTACTCTGCG
AGCGTTTGTTAGCAAGCAGATTTCTCCGAAGTACGAACCGTCGGATAGACTGGTGGCAAC
TTCACCGTTGGCCATGACTATATCTACGATGCCTTCTTGGATGAAATACATTTTATTTCC
TATTGTTCCTTCCTTTATGATAATGTCACCAGGCTGAAACACTTCATAGCGTAGTTTGGT
GACGACATCTGACACAAAGTTGGAGTCGGCGTTTGCAAAGAAAGGTACAGAGGCCACAAG
TGAGCGACAGTTGTAGTTGATGACATCTTCGCGCAGTTTTTCGCTCAGCTCGCCCAAAAT
TACTTCCTCATCGAAGAATTTCCCTTGGTATCTGTGTTCGAAGTACTCGGTGATACGTTG
ACGCATTTCACGTGGTAATTTGCGATACGCCATGTACTCTTCTACTTGTTTCACCTTTTC
ACGGTATTGCCTGCGTGAAGAGTCGAGACTCTGGATGAGATTGGTTGCGTGACCTAGGAA
GAGCGCGTAGCAAGTGGCTCCTGATATCATCGAGAGCATCGTGAGCCACATGTCGGTGAG
TGATTGAGGAGGGAACCGTCCGTAACCGATGCACAACATATGTGACATTGCCTTGAACAG
CGCCCATGAATATTGTTCTAACCAAAAAGCCTCCTGTAACTCGTTTATAGCAACCCACGA
GTTTGGTGGAAATCCTTGCAGCATAGGAACCAGGAACTGTAGACATCCGGACCAATGGCC
GATCAACAGCATCATACATATTAAGTTGAATATCCGCATGAACACGGAAGCCATGTTGAG
AAACTTGAAGATCAGATTGCTTTTGGTGTGCCCCTTCTTTTTGGCAAAGTCGGAGCTCAG
ACGTCCCCTTCTTTCCGTGCGCTTTTTTTGAAGATTCTGCAAGATCTAGAAAACAAGCGA
GAAACACGAGATAGTAGGAAGAGAGCCAGGCGCGCCCGAAGCGCGGGCGGGATCGACGGG
CAAAGGTAGTCGCGGGGTGTGCGGGGCGGAGCGGGGCCGGGGGGGCGTGCGGCACACATA
GAATGCACTAACATCGAGACGAGTGGTATACGGGCTAATCCCCTACTCTAGGCGCTGGTG
GGCGCGGGCGACATGCTGCACCTGCGAGAAGAGGTCACGTGAGCCGCTGCCGTCTGCGTC
GGCTGGCTCGTCGCGCGGCTGCGGCCCGGGACTCATCTGCACACAACACCGGCACAGCGA
TGTCGTAGCCGTCACCCTCCCCGTACTCCACTTCTCACTGACTCTCCGCTTTTTTACGAT
TTTAGACGAAACTTTTTGCCAATTAGAATGGAATGTTTGGTTTAATTTAAGAAATCATTG
CCCGATTGAGGTATTTTAGCGACATTTTGAATTTTCATTCTACCCGCGAATGGAACAGAT
TTATTTTGGGATTTTAATAATTTGAGTGTGTGTTTTGTTTTAATTATTTTAAATATATGC
GTTTTGAAATTTTTGAAATTTTGGTGTTTAGCGTCAGCGGATCGATTCTAAAGGCCTTGA
GAAGCGGCAAATAAATATTATTGATAATTTTGCAAATAATAATTATGTCGTGTTGGCAAG
TGTGAGTCGGTTCGGGTCAGACGCGAGGACGCGGTCGCGGCGCGGGCTCATAGAGAGAAA
AGATAGATCAGACGTCACGTGTGAGAGCGTGCTCAGGCAGAAAGAAGCTTGCAGAGAAGC
AGTAGAGAAGTGCAGAGCGGGACTTTGGGCTCAAATACAGTGGAGGGTGGGATCAATGAT
GATGATGGCTTACATATACTTCCTCCCATTGTGAGACATATCGGACGAGCCTGGAGAGAC
GGAGCAGTCGAACCAATGATAGCAGCTTTGCTAATCGGAGTATCCTCAGCGCGCGACCCG
CATGTAGTATTTGAAAGTTTTCACTGAAATCCTGATTGAAGATCAAAAATATATAATCTA
GTGGTATACTAGAGATGAGGTCCAGGAAGAACCAAGTCCTCAAATAGTGTTTCGCTATTA
ACTTTGGATCTAGTATTACTTGCTCTGCATTATCTTGTTGCATTATTCCTGTTCTAAAAT
TAACAACGATATCTATTAGAAATATGGTATCGGACAGACAATTGAAGGCAATCCAGCGCG
TGCTAAGGTCATCGTTGAAGAAGGAGATGGCAACTGGTAGGATGATTAAATTCGCCACAA
GAAGTAGCAGCATGCATAAGTCCCAGTAAAATCTGAAACTACTGCACGGATGGATGACCC
AATGTCCCGCCGCCTTCTGTCTGATGCGCTCCTTCATAAGTGCCTTCTTTGAGCCGAATA
GTTTCATCGCGAGTTTGTTGTCGGTGGGCTGGAAGAGGGCTTGCAACTGGTTCCGCAGGA
AGCCCTGCTTTGCGTCCGGCGCCGGCGGTGCTGGTTCCACTGGCGTTCCGTACAAGGACA
CATCGTCCAGGCCACCGAAGTGTACTTTGCCGGTGCCGCTGCCCTGCTTCAGCGACATAT
CGGCGTCGCTTTCGCGGCCGGCTAGTTCACATGTGTACTTAACAACGCGACGGAAGAGGT
AGCTCGTGTACCTTGCACAGCACATGGCGAACGTTTTCGTCAAATCAGTGAACTAAGAAT
GTCATTTTTGAAATTATAGAACGGCACGGGCGGCGATGTGCCGACGAGAATTGAGCGCGA
CTGGTCGACGCTCATAGCACTGTCGATTGCGCCGGCTGGTGGTGGCAGGGTCCCGACGAG
ATACACTAACCACGACGCCCCGAAATGCACGCGCCGAGCTTCACAATAGCTTATAACGCA
CTCGCTAAACCGGCCGAGCGGCTGGCCAAGCCCGCACTCCACCATGCACTGATATTTTTT
CCATTATAGAGACCAATTAATGTCAATGACTGACGAAACCAGAAGCAGATCACTGCTGTT
ACTCAGGAATTAATCGTTTGTTTGTGTGATGATAGCTTTATACGCTATTTGGGGCGTTGT
GGGTAGATACTTTGTATTCTAATTTGTAATCTACTGTAGACATTAAAATATTGTGACATA
AACTAAATACATTATACAATATTATTAAAA
(5610 bp)

- SilkBase 1999-2023 -