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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68226_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
Transcript
Level		FPKM:125.87 TPM:219.54
ORF EntryO_BomoEE15717_complete:A_BomoEE_comp68226_c0_seq1
Sequence
(Nucleotide)
GTACTGGATTTCTTGTCTTCATCAGATTATAATTAAAGGACGACTTCACTATTCTTTGGC
CAGTTACGTATCCACTCATGGTGAAAGAGTTAACTATCAGCAGAGTTTCTCACATGTTAA
AATTTTCTTAAAGTAGTAAGAAGGTAAAATTTGTGACCAACAGGACAGGTCCTGACGCGC
ACTGATAAGTAGGAACTAGTCTATGGTACCGTAAAAAGTATTAAATTAGCTCATAGATTA
TCTCTGATTTACAACAAAAGGCCGGGCGACGACATCTTGAAACGCAATCTTTTATGTCTA
TGGTTCGCGTCGTTCTTTGGGCTCGCAAGATTGCGAGTAAATTTGTTTCAATTTATAGTT
TTAGGTCTTTTTGACCTTTTTTTTTTCATGGCTGCGTAAAAACGCGGTTGAAAGTGCAGA
TTGTTCCAAACATGAGTGATTATTCTTCTATGGCTACGCTCCAAAATAATAGTCAAACGG
CGGGATACGCGACTGCTGTACAACGTGCGAGACAGGTAGCTGCTAAGATTGGTGGTGGTA
GCAAGAGGCCATTGGAAGACGGACCAGAACCAACACCAAAGAAATTAGCACCAGTTGAGC
CGGTTTATACACCACAACCTCCAGTTATGAATTTTGTTGACAGTGTATCGCCAGTTGCGG
TTGGTGGTGGCGGACGTATGATAGCAGGTGCGGGCCCTGGCAGTGGACCAACAAATTTAT
TGCCCGATCAGAGCATCAATGAATACATCAGAGTACCTGATCGTATGGTTGGACTAATAA
TTGGACGTGGTGGAGAACAAATCACCAGACTGCAAGCAGAATCCGGTTGCAAGATACAAA
TGGCACCACCCACTGATGGAAATCCTGATAGGCTATGCACGCTTACTGGTTCTAGAGATG
CTATACAGAGAGCTAAAGAATTAGTGAACCAAATTGTGAATCATCGAGGAAGGGAGAACG
CTCCACAACATCAAGACCCTTCAGAACCTGGAATGAACATGAGCAGGCCAGGCCCTAATG
CAATGGAAGAGATCATGATCCCCGGCGCCAAAGTTGGCCTGATCATTGGCAAGAATGGCA
AAACAATAAAACAACTCCAAGAACAAACTGGAGCCAAGATGGTCGTAATACAGGATGGAC
CTAATGAAAATTCATTTAAACCGCAGGAGAAGCCTTTGCGTATATCCGGCGATCCGGCCA
AGGTTGAGCACGCGAAGCAGCTCGTGTTCGAGCTCCTCGCCAACAAGGACATGCAGGAGC
CGCCGCGCCCCTACGACGACGGCTACGGCGGCTCCGACCCCGGGAACGGACTCGCCACCA
CTTCCGCTGAGGTTTTAGTCCCAAAAGTGGCTATTGGTGTTGTAATCGGCCATAAGGGTA
AAATGATAAAGAAGATACAAGCGGACACCGGATGTAGGGTCCAGTTCAATCAAGAGCATG
ATGAGGAACCAGGGGATAAACTATGCTACTTGCAGGGGAAACCCCATCAGCTAGATCAAG
CTCGTCAGATGATCGAAGATCTTATATCTAGTGTCAAAAGATGTGAGGAGGACAGTCGGA
GCCGTGCAGTACGCGGTCAGGGCCAGCAGAACGGCGACAGGGGCGGCATGGAGTACGGGC
AGCAGTGGCCCGACCGACCAGAGATGCGCGTCACCTTCACCATCCACGGACCCAAGTGCG
GCCTGGTCATTGGCAGAGGTGGTGAAATCATAAAGCAAATAAACGCTCAGTCCGGAGCCC
ACTGCGAACTAGACAGGAGATGCCAGAGTAATGACAGGAACACAAGGACGTTTATAATCA
GAGGACATCCAGAAGCAGTTGAGACTTGTAAACGAATTATCATGGAGAAAGTTGGTGGGC
CTGTCAACTTTATCCCGGAAGGCAACGGTAACGGCAACGGCAACGGTAACGGGTCCGGCA
GCGGCGGCGGCACCCCCGGCCCCGAGTACTACACGGGCGGCACCCCCGCCGCCTGGGGGT
ACAACCCGCACTGGCACCAGCCGGCCGCCTCACAGGGACCGCAGCAACAAGTGTCAATAA
ACCCAGCGACGGGTCAACTGGATTATTCACAACAATGGATCGACTACTACCGCTCTGTGG
GCCTTGTCCGGGAGGCCGAAGCCATTGAACAGGCTAAAATGCAGCAGCAGCAGCAGCAAC
AACAACAACAGCAGCAGCAACAACAGCAACAACAACAACAACAGCATCAGCAACAAGAAG
AAGCGAGTAATCAGTCATTGGGCGGTAACGACAGCGGCGGTCCCTCCACCCCGCAGCCCA
CGCAGGACTACAGCGTGCAGTGGGCGGAGTACTACCGCAGCATCGGGAAGGTCAAGGAGG
CTGAGGCCATAGAGGCACAGATCAAAATTAAGCAGCAGCAAAACCAACAGCCGCAGCAGA
TGTCGCAGGCGGAGCTCCCGGGCGAGGAGTCCACGCCGCCCGGGCCCGCGGCGCAGTACG
CGCAGTACTCCATGTACCAGGGCGCCATGTACCCCGGCTACTCCGCCTACGGGTACCCGG
CCGGCTCCGACCACCAGCAGTGAACTCAAAATGAACGGGTCGAGCGCGGGCTGTCACGAC
GCGACACGTCTTGTAGATTTAATAATTAAAAAAAAAATTATAAATAAGTAAAAACGTTTC
TACATTTCTTCACAGTGCGAGCTATAGATGAGACATCCACAATAAATAAATAAATTAATT
AACAATTTAAAAGAAAATACGTCTCTGTACGCGTAAAAACAATGCTAAGAGAAAATAATT
AACGAACAACGTTTCATAGTTTTAGTAATAAATTCAATTAACATAAGTAACGAATTGTTG
ATTCACAATTTAATCTGACCTCGTAAGTTCTCGTAAGACCTCTAGTTTCTCACAAATTCA
CTTGTTTGAGACAGCATTTTATTTCTTGTGGATCCTACTTCATTTACTTTATCAATACAC
TGTTTAAAGTATATAATCTTTATGACTGACAATTATCAAATTTATATTTCAAACGTGGCT
GTGTGGTCTATTATTATATATGTTTTTTTTTTACTCTTTATAACAACAACTGTACTACTT
TTGTATTGTTTAAAAAAAAATGTGTGTAAACTTTTTTTGATTTTCCGTGCCAATATTCAT
GTATGTTGTGCCAGTCTGTCCAGGTTAAAAATATAGCCACACTGCCTTTAAAAGTCAAAA
AATGCAACGGCGTACCACCCGGGCTTGAGAGAGAGAGAGAGACACTGAATGAAAGCGTAA
TGAGAGCGAGACATACTTCGCCGAGGAGCCGAGGTAAATGTATTGAGTGACTTAGCACAT
TACACGATTGTCGTTAGGACGCGTTAACGTTTTAGTGGATTTACGCCACTCTGAATGTTT
TTTATATTTATCGAAACTATGATATCAGTGCGAGGGAGGAAACTCTCGGAATGTGCGTAA
CGAACTCGTATCTAGTTTTTAAGTTAGCGACTAGTTTTATAAAGTTTACGCGACATCTCT
CTTGACTCAGCTCCTTTAGGTAGTAATCGACCGCAGTTTTTAAAAACACAATATGTATTT
GAAAATTTAAATCTTGTTACAAATAAAATTATAATGTAATTTTTTTAGTGTATAGACAAA
CAAGAGGTAATGTAAATCGATCTACATTCCTATAAAAAAAAATTGTTCAATTATGGGTAA
ATAAAAGAAAACTTATCTTCGCAAGTTTCCGCTCGAGGTTTGAAGGGCGTCGATCCCGAG
TCTTGTATTATTTTTTAAGATATAAAGTGTATGTTGATTGAAAAAAAAAAAAAAATAGGA
(3780 bp)

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