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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68225_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_serine/threonine-protein_kinase/endoribonuclease_IRE1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0002119 P nematode larval development
GO:0003824 F catalytic activity
GO:0004521 F endoribonuclease activity
GO:0004540 F ribonuclease activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0006986 P response to unfolded protein
GO:0006990 P positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030969 P obsolete mRNA splicing via endonucleolytic cleavage and ligation involved in unfolded protein response
GO:0035966 P response to topologically incorrect protein
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1902255 P positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO:1904576 P response to tunicamycin
Transcript
Level		FPKM:0.33 TPM:0.58
ORF EntryO_BomoEE15709_complete:A_BomoEE_comp68225_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTAAAAGGGGGGGGGGGGGGTAAGTGAAGCCACATTAGAAGCGACAG
CTTATAAATAAAATAAAATGGTTTGTCTAGAAAAAAATAATATAGAAACACACATTTAAA
AAAAACTAATTGAGAACCTCCTCTCTTAAATAGTCGGTTAATAAGAAGGAATATTTAATA
TTCGTCATTACATTTACATACCTTTCATCTCTAACAGTCCGCCTCACACTAACAGTAACT
GAAATTAGGGTGGGTTACTCAATTACCTATATCCATAGAGTGTAAGTGCGATAAGCCCAT
AGTGGCCTGCCTCAGTATTTCGACCGAATCAATCTTGCACTCGAAGTTCAACTTCTTCTC
AACATAGTCCTGCAATGTCGCTGAACATAGCTCTAGTGCAATGTACCTGAACTGCTTATC
GCGTTCAGTACAGTAGTAGCGCACGACGTGTGCGTGCGCGTCCGACTCCCGCAGCAGCGC
CACCTCGCGGTCGGCGAACGTGAAACACTCAGGGAGCAATCGTTTTACTGCCACGTCGCG
TTTATCGAAAGTCCCTCTGTAAACGAAGGTGCCTTCGCAACCTTTTCCCAGCACCTGATC
TGTCTGGAATGTAATCTTTCCGATCTTCATTTCACCCTCTCCTATTTCCATGAGCTGACC
GGTAACTTCGCCCTGGGACGACGTAGATGAGGTGGAGCTTCGGGAACCGCCTTGCGATAG
TTGTTGGAACTCACGAGCCTGCAGCCTTAAGTACCAGAACATGGCGATGACCAAACCGAC
GAGAATAATTAGTGCCACTTTCAGCACTTTATTCTCCTGCTGGTGGAGCCAAACGTGGGC
CTGCTTGTACCACAGATCGGGCCTGAACGACAAACCCTCGAACAAATCCTCAGTCTGAAC
CGAAACTGATACCGAATTGGACTTCAAATTCGTTTCGTTCTCAACGTCATTCTCCGTCTG
AGCTTGTACTGCTCCGTTGATTAGTTTTATTGAATCGATTTGTGGATCTCTCAGGTTCAA
AACGTTCGAGTTAGGCAAATGGGGTATCCAGGAGGTCGTCAGTTCCGGAACTTTGTAGTG
GCCGAGAAGGAGATACGGCGCCGAGACGTGCAAGTTAAGGTCGCTCAGTTTGTAGTGGAT
GTTCTTGATAGGCTCGTAGCGCGGCGCGTTCGTCTTTAGTGTCTCCGTCGAGGGGCCTTC
GATGAGCAAGGGCTGATGACCCGTCGATATAGTTATCGTGTTTTTATCGACTAACGACGA
TAGCGCGTATAGACCGTGGTTATGCTCACCGACGTATAAAGTCGGGTACAATTCGATATT
CGAATTTTTGAGTCCTTTCCCGTTCGAAAGGGTTTTAGCGTCCTCCATGATATGATCGAG
CGTGTCGTCACCGATCGAGTTGAAAGGGACGGAGATAAGGCCGTCTCTGTCCAGGAGGTA
GGCAGCTACGACCGGAGTCCCAAAGTTGTGGGACCAGACGAGGTCGCCGGTCTTCCGGTC
GAAAGACATGACGCGACCGTTCGACGTCGATGTGAAATGTATTGTACCGTAATCATTCAA
CATGTCCTTGCCCATAGCTAGCGACGTGTAATCAAAGAACGTAACATTCCATTTATGATT
TACATTCTTCGAATCGTGCATCAGGATGTTGTATTCAGTACGCGCCACGTAAATACCTTT
CTTCTTCTCGGAGTTGCAAGTGTTCTCGTCGTCGCTTTTGAATATTTTCGATTTGTCAAA
ACCTGAAACGTGCTCACGAAAGCCGGTTAATGGATCAATCATGAACCAAGTATCGCTTTT
CTTTCCGGTGTACAAAATACCGTCTGTAGATCGGCAGGGCGCGTTTGCCACCAGCTCCGG
TATTGTAAACGGGAGCTTCTTCAACATTTGCTGGTCGCCCCTCGGGCCGTACGTGTATAG
GAATCCATGCCTCGGATCCGGGAGGAACTGCGGCATCAAGTTCGCGTCTTGGCTCGGAAC
TTTGACAACGGGCTCGTCTTTTAATTTCCAAATAATGTCTCCAGACACAGGATCAACAGC
AACCATACCGCCTCCTAACGTGGCAAACAGAAGCGGCCGGTCATCCAAAGCACGGGATAT
TTCTGTGCTTTCCTTTCCCTCTTCATCAACAACGGTTCCGAAGCCGGAGGAACCGAGCAG
AAATAGTATCAATAATAAAAACTTCATGTTGACAGTTTATTTAATTCACTTCACATTTAT
ATTCGGAGTAAAATCCCATTATTTTTACTTAATTAAACGTAAGTAAGAATCAAAACACGA
CAAAAGAATACTCGCGAATGTGTTTTTGACGTTTCATTTGACAGCTGACTACTAGTGATG
CCCAAAAATTA
(2351 bp)

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