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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68179_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_polycomb_protein_Asx_[Papilio_machaon]
Ontology
GO:0000785 C chromatin
GO:0001709 P cell fate determination
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007469 P antennal development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0035800 F deubiquitinase activator activity
GO:0045498 P sex comb development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:2000152 P regulation of ubiquitin-specific protease activity
GO:2000158 P positive regulation of ubiquitin-specific protease activity
Transcript
Level		FPKM:0.28 TPM:0.50
ORF EntryO_BomoEE15585_5prime_partial:A_BomoEE_comp68179_c0_seq2
Sequence
(Nucleotide)
GTTCAAGGCATGGCCCCATACAGGCCCATCGAAAATACCATCGGTGTTGACTGATTTACA
GCACTGGTCGCCAGGTTGGCAAGACCAAAGTGCGCACGATAAGTCGAGTTTGCCTATAAT
ATGGCCCAACTACTCCAACTGTACTATGACTTCAATGCGGATCTCTCCAACCACGATGTG
GACATCAACTAGTGGCGCCTTCAGAGACCGTAAACCCACAGGACCTGGGATATGTACTCA
GAAAAGAATCATAACCGATTTTCCACTGAAGACACAAAACCAACCCCCGTGGAACACCGC
GTATGATCTTTGTGAATCAGTTGCATACCGATCTGGCCTCCAAATAGGAGCTCATCAGTC
GGCAGAGTTTTTAGAATGGTCGTTGGTGGTGGCAAGAGTGTCGGCGATTCGGCGGTGTCA
GCGTATGAAGCAAGTGAGACAGAGTTCGGCTGAACCAATGCAGTCGTCGTGGCAAAACGC
ACCGCACTTTTTACATAAGATCATCGCACGGAGGTTACACACACACGAGTCCTCGGCACC
GACGCTTCGACATCGTGCTATGCTAACATTTGTATTTTGATTAGCTGGTGGAGCACTGGA
GGCTCTGGGTACAACATTCGGCGTTCTTTGAACAAGAATATATTGGCCCATGTTGTTGGG
TCGATTTTCATTTACCTCAGTGTGTGCCATAACCGAGACAGGCAGCTGTCGTAGTAGCAA
TGGGTGTGGTTGTGGCACCGAGGGCGCGGGCGGTCGTAGCGCGCGTGCAGGACGGGACAG
GAGCGCAGGAGGCGGCCGCAGTTGGCCTCGCAGGGCGTCCCGATTGGGACTATTCTGTAT
TACAGCTTGACATATTTGGTAGCTGCGCTCAAGATTCACAGCACCAGGTGGTACCTTGTT
TGAGCTACGGCTCCTATTTGATTCTTTTCCAATCTTTGATTTCTTCAAAGATCTTGCAAT
GTGGGTTAATGACCCAGAATGAGGTACGTTTGTGATATTTGCACTTGACACTAAAGAGGG
CACTATATCTAATTCTTGCTTTACAGCAACATCTTTCATTGATTGACAGCTTTCTGAAGA
ATTTGAAGATTCCATGTTAAAGTTTGCATCTCTGTCGTCTTTGTAAATGCATGGATCATC
ATTTGTATTTATGTCATCCATGCACGCCTTAGTATCTTCGCTCACATTTTTTGTGTTTAA
AGTGTTCATAGTTTCAAATGTAGTGAATCCCATGTTACTTTCAGTATTAGTCCAATTGTT
TTCATTTTTCCATTGCACAGCTGAAGTCTTTGGCTTAGCTGGATCTTGAGTGCTGTCATC
TGGGTATGACACAATTGGTGTATTAGCAACTTCCATCATTGGTATTGACGAATGGTGTGA
TAATGGCATTGTCACTACTGCTGTTACATTTGTTTCACTGATGTATGAAGACACTTCCAT
TAAGTTGGGTTGGGCAGTATACTTGACATCATCACTCTGGGATGTTAAGATGTTAAGCCC
TGTTTCTAGAATGTAGGACTCCGCATCCTTAAAGTGGTCATCATAGCTGTTGAGATCATT
TTGTGGCAGTTTAGGCTTTTCACCACACTTTTCAGTATTTTCTATAATTTCATTTTTGTT
TAGTGATTTTTCACTTTTAGGCGGAACTTCTATGTTTTCTTCTTCCATATTTTTCAAATT
ATGGCATGGAACCTCATTAGTCACCTCAATTAATTTTAATGTCTCTTTGTCATCAGAATC
TGTTTGAACTGTTTCGGTAGTCTCTTGAATTGTGATTGGCATATATTCTCTCTCCACATC
TTTAATTAGTGGCATTTTTTTTTCATTTTCCTTGTTATCTTCTGCATCCTCAATACTGTG
TTCCCCACATGCAGTTTCTATATTTTCACTTTCTTCAATTGCGACGGTAACATTAGTTAT
GTTGTGTGATTCTATTTTCAAACTTGAGATAGAAGATTCACTTCTTTCATCATATTCATA
ACCTGACGGTGTTGCTTTACTATCTTCACTGTTTGTATCAGGATGATCTTGTCTCACATA
TAAAATCTCATTATTAGGGCACACTTGCTCGTTGCCATAATTTGTTTCTGTGTCTGAGTA
ATTAATAATGCTTGAATCTGTATTATGAGGCATAAAACTAGCATTATCCATAGCATAATC
TCCTTCAAACCTTATCCTCTTAGCTGTATTATATTCTTCATTATCATCACTTAATCTCTT
TGGAGGTTCATGTGAGTTACTATCTGAATCAATTATATCTTCCTTTACTTTCGGACTATC
TTTCAATAGGATTGAATCTTCAATGGTCACTGCTGAGATATCTGATTCTTGTTTAAGTTC
AGTTCGGTCAGACACAGTATCAGGTAATAGTAATGGATCTACTGGTGTTGAGGAGACAGA
ATCATCAATCCTCTGTGTAGATGAGGAATCTGAGAAATTAAAATCAACCTGGCACTCTTC
GTAGCTTTGTGTTTGGTTTTTAATATGTTTGATAGGTAATAGATCTGGAACAGGTGCTGA
TGATTTAGTGCTGATTCCAACAGAATCATCAGTTATTTCATCAGTTTTACATGAAGATCT
GGTAACAGCACCAACTGAGCGCATTCTTTTGCTGGTACTGGAGGACTTATTCTTTTTTAT
TTTTGGAACAGTACTGCTACTGGTAATTGAAGCAGTGGGTCTTAACTTTATTGTAGTCTT
CAAAGATGGTCTTTCAGAATTTAAGTTCACAGAAGATTTTTCTTTTCTAAGCTTCTCTCC
CCAGAATGGTTCAAAATGTTTTATTTTCCATGGGTCTATCTTACTTTTTTCCCTTTCAGC
TTCAGTCTTCATTTTCTGTTGATTCTCTGGTGTGAACTCACCTCCAGATAGACTTTCTTG
CCACTCTATACAAGCTCTAGCAAAAAATTCATTATTAAGACTAGAAGAATTCAAACGGCC
TGAAGGAGTGAGTCTGTCTACACTGGGTAATAACTGACCCAACTTATATTGATACAAAGG
GGGCAACAGTGAGAATGTATGCTTATTCAGTAAAGCCCTAATATTAGTGTTTACTAATAT
TGAATCCGGTGTCTCCAAATCAATACAGCCTTCCCGAGTTTGCTGAAGTTGAGCTGCAGT
AGATAGCTTTTTACTGTTGCGTTTACGAGGCTTTAGGCAAAATCCTGGAATGCTGGCCAA
CACTTCGCGCATTGTTGATGGCCTCGTATTGGGAGGCGGTTCTGTATAGGATGAAGCTGC
CATCCATTCTCGTGTTTCAGGTGGTGGCGGAGGTGGCAAAGGTTTTACTATAATTCGTGG
AAGAGTTCTCGTATGATTAGAGCTCTTTTTTCTTCTTTTAGATTGCTTTCTGGACGAATG
CTTACTCGATTTTTCACTGTCCTCGGGTATTCTTATAACTGAATACTGTTCATTATTGTT
CATTACATATTTGCAGTCCGAAGAGTTATCCGAATATTCCATGGTGGTTCCAGTATCCGA
AGGAGTTAGATTAAGCTCCATTATTGCTTTAAAACGGAAATTGCTTCATGCTATCATACT
CCTTACTTTCAACCCATTGTTTTTAAAAGCGGCTTAAGTACTAATTTTATTCTCACACAT
CTTAAAATGTTCAGTGTCTCATGAGTATAATAAAGTCCGAAAATATATATTTTTTTAGGT
AGATTAAATTTTGCTTTCAGTCCTTCATTCAAGCAACGAGATCGCAAAATGTCACAACAA
CAACGCAGAAAATGGATCCCAGCCTTTTGCATGAAATTTTAGGCACTTAAGATTAAATCA
TATAAATGACATTCTCTTCATGACGATTGATGTCAGTCTTGCTTGCCGCAGTTTACGCAA
TCCATTTGCCGTCAGTCTGAATAATGTTAATTTTAAACTGATATGGAATCGAACATGTAA
TAGGTAACTCGTTGGAATGCAAAACTGATTGAGATATTTAAAAACTCGATTTTTAATTGG
CACGAATTTTGAGCGTACTGCGTAAGTACAGGCAGGGCGAATCATTTCATCGCCTTTACA
TTTTTACAAGAGTAGTTATATCCCCTAGTCGTGATTCTTAGATGCTGTTTAGTTATAGAA
CACGATTATGTATGCAGCTTTATAGAAGTCATATTTCCACATTAAATTTCGTCAACGACA
TTTCATATCAGTATGTGGAGAACAATTATTATGAAGATGCTTACATTTTACAAACTTAAT
TTCTAGCATGGACTTTCGCATATTATAATCACTAGAACTTATAGCCTAAACATTTTGGAC
ATGTAATATAAGATAGCGCTTATATATTTTTAAAGACTTTTGATCATCATTTCATGTCTC
ATGGGATGCTTCAAATTAGACACATTAAGTTTATTCTGTGCGAAGATTCCCATAAACTAG
TTTGAATTCGTAATACTACGGCAATATCGTCCCGTTAGGATCTTTTCTACTTAGAGTGGT
CCTTATAATTATCTATGGATACTGGCACGAATATTAATAACATAAAGAAACGAGTTGGCA
CTCGACACTCTCAGACAACGCCTACTGAGTTTTTCGCCG
(4539 bp)

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