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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68160_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_loquacious_isoform_X5_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0042803 F protein homodimerization activity
GO:0046782 P regulation of viral transcription
Transcript
Level		FPKM:55.92 TPM:97.53
ORF EntryO_BomoEE15554_complete:A_BomoEE_comp68160_c0_seq1
Sequence
(Nucleotide)
TTTTCATTCACTCATTTCACATAAATTTAATGTGCAGGTTACATAGGTTGTTTTACGAAA
CTGAAGATCTAATTCTGTTCTCTTTTATTTTTCGTATTGTATCCGTTTCATTTTCAATAG
CAAATTTCGATAAATACATTTGTAACTACGGCTGTGGGAAAAATGGAAGGGAATACGGTC
CACCCGCATCCATCTGTGGTACCGGGTTTACCACCCGGTGTTATCCATGGAATGACAGTG
CACGGCAGTGGACCGAACGGTGAACACATTCCTCACGGTCCAAGACGCCGCTATCAGACC
CGACCCAAACCTAATAACTTGCAAAGATTGCCTTTGGACGAGGCGGCCAAGAGGGAAATG
GAATCACTTCCTACAAAGACTCCTGTCTCTGTTTTGCAAGAGCTGTTGGCACGTCGTGGA
ACTGTTCCTAAATATGAACTAGTCCAGATAGAAGGCATGATACATGAACCCACTTTCCGG
TACAGAGTAACTGTGGCTGATTTAGTTGCAATGGGCACTGGTCGCTCAAAAAAAGAGGCA
AAGCACTCTGCAGCCAAGGCTTTACTGGACAAGTTAACTGGTGCTACACCAGCTGATCAG
ACTACCAATGGCAATGTTCCTGAAACTGGTGCTGTAGTACCTACATTTGAAGATAAACTA
ATGGGTAATCCTGTTGGATGGCTTCAGGAGTTGTGTATGTCACGATTCTGGCCACCACCA
TCTTACCATGCTGAAAACGATGACAATGTTAATAGACGTTTGCCCCATGAACGTCAATTT
ACGATCATTTGCACATTGCTCAAGCGCCGTGAAGTTGGTACAGGCAAGTCAAAGAAATTA
GCTAAACGGCAAGCTGCCTACAAGATGTGGCAGGCCTTACAGGACAACCCACCAGAATCC
TTCCAGAATGATGATGAGGGCGGTGTTGCGGCCCGTTATGCCGATTTGAAAGATAGTAAA
ATCTCCACATTGACCACGAGCCATAGCCATAAAGTGTCGCAGTTCCACAAACATCTCAAA
CAGTCTGTTGGCCCCAACCTGGCCAAGTTGCAGGTGACACCACTAAACAATAAGGATTTT
AACTTCGTTCAGTTCTTGCAAGAAATAGCATCAGAGCAATCTTTTGAGGTGACCTATGTC
GACATAGAAGAAAAGTCTATGACTGGTCTATGTCAGTGTCTTGTCCAGCTTTCCACATTG
CCAGTAGCTGTATGCCACGGAGCCGGCCTCACCAGCAAGGATGCCCAGTCATCTGCTGCT
CAGAACGCCTTGGAGTATCTCAAGATTATGACCAAAAAGTGAAATTTTCAACATCTTACG
ACATCAGCAAAGACCAGTGCGACGACCTATGCATTTGATCTATGGGCTCTAACGTTATGA
GATTTAATTTTAATGCAGGCCATATCACTATGTGTTTTGTATTGATGTCGTTAGGTTTTG
AGCCTTCATATTGTTGCATCACTTTCCATATGAATAATGGCATTAATAGTACGCATCTAT
GTACCAATAGTACTTTGGGCTATGCTTTATAACTGGCATGTTTGCAGTAACCAACTTGTT
TTTTTTTTTTTTGGTTAATTTATGGTAGGCAGTTTGAAACTTATAGCTAAGATAAGTGAA
CGAGCTCACGGCCAATCTTGTGTTAAGGAGTTACTGGAGCCTATATACTTCACTGAGATA
CTATTTTCAACTCTGTTATTGTTCCCCCGTTTCAAGAGATAATTTTCGCGATAGCTATTC
AATTCTATAATTAACTCCTCACTGAAGTGTTAACAAAGTGCTGCGATATGAGGTTTATCA
ACCGAAGTTTAAAAACCGTTCTTAGCAGTCAATTTATTATGTATTCCCTAGACATTTATT
TCCACCAAGAGCAATAAACATTTAAGCGATTTTAAGCGAAACGGCCGTAAAAAAAGTGTC
ACTCTGGCAACTAGCATTGTGATGAAATTAAATCCTTTAATAATTTGCAAGTAAAAGTTC
ATTATTTATTAATAAAACTACTGCCAATGTGCGAGGATAAATTGCATAGCCCGTAATCTT
AAAAAACAAAGTATGGAGTGATTTGTCATAAAATACAAGCTATACTTTGCATAGAATTAG
TGTAATTTTCCCAGCGTGGAAATTACGTGTTATAAAAATGTAAAAAAAATGAAATAATAT
GAAAATACAAAAAAAAGTGTGGATTTACATATATTTCCAGTTTAATATTCAGCATCTTAG
GCATGTTTTTTGCATTCATATTTAATTATTAAAGTATAATCTCAATCTTAGCTTTTAATC
TATTTTATCTATAAATTAACACTATTATTGCGGCGAAGTCAGTATGTTTGACTTATTTCG
TAAATTCATGTTTAGGAACTATGAATTTTAACTATCATTGGTAAGCCTTTTTAATATGCT
GAGCATTAAACGGAAAATAGTTTCAGCTAGTGTCTTGTTGACGAACTGCCCGACCTTTGC
TTTGTAATAAGCTCCGACGTAGCAATTAATTCACTTGAACTTTAAGAACTTTTTACAAAG
TGCAAGGGTTGGAACATTGATGGTATTGAAGGATTACAGGTCGTTGTTCGTTTTGTTTGA
TACCAGTGATTGTGAGTTTTCTTTTGTGTACATGATGGAAAACTTTGCAGGGAAGTAGAA
TACTAAATGTATGAGTGAGATGCATCACTCACTGTAAAGAGTTTGTAAAGAGAGGATCCC
TTGCCTGTGAAAATGGGCATTATTTTAATGCAAAGTATAGAGGTTGTAACAATTTGTACC
TGTACAGTGTCGTCGTCGATGTTTGTGATCCCGGCACCGACGAGGAACCTGCACGCACCA
AGTTTCTTTTAAATTGAATGGTGTGAGTTCAACCTGCCCTTATAAAACATCGCACTGTTC
AAGTTAGAAAAGACTACTCGAGTAAAGGATTGGAGTTCTGTTCAACCAAGACCCAACTAA
ATAAAAACTAATATTTTGTCCGGCCGTAAGGACTATGATTGTTCCACGTTTATTTTATTT
TTTCTTTAGTGAGTCTTGGTTTTACTTATTGTTATTAATTATAATTAAGCTCTAAATATA
ATAATATCATGGCTTTTTAACATTTGTCACACCTGCTAATAATATGTATGAAGTCTATAT
TATTTTAAAACATTATGAACTTCATATTATTTCTGCTGTAACTTCAATAAATTTTTGGTG
TTGCCTAAGTAGTGTTTTAAAAAAAAA
(3207 bp)

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