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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68151_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
Transcript
Level		FPKM:70.95 TPM:123.74
ORF EntryO_BomoEE15537_complete:A_BomoEE_comp68151_c0_seq2
Sequence
(Nucleotide)
GTCAAAAGAGCGTAGTTTAGTTTCAGTTTTTTTTTTTTTTTTTTCAATTTCCATTACTTT
TATTACGTTAAGAAACCTAATTTTGACAATTTTTCAGATACGATGTTTATAATAGCATTC
TTACTACTATGTTGAAATTTCGTAGTTTTAAAAATTCAGTTCCCAAAAACATGCACAAAG
ATAATTATCATATTCATTTAGTAATATTGAGGTAGTTATTAGTTTCAAAACTTATACCAA
TCATAAATGGTTCTAAAAGTAACAGTAAAATCAAAGAATTTCCGGTGATAAATGCCTGTT
TAAATGGAAACAAAAATCTGTTGACGGAACCTTCATATAACTACATGAGAAGCAAGAATG
ACTTCTCAAATTCTAATGTAAAATTTAACAGATATCGTTGGTTCTAGTGCAGTGTGCACC
ACGGCGAAACGTGTCCACGTCATGGTCATTTCGTAACGCTATATAGTCAACCATCGATAT
CGTGCCATTTTACTAGCAAGGTACATTTAATACACGTACACATACATTAAACATTTAGCT
TTAGACTCGATGAAACTTTATTACATATGCATAGTGGAAGGGGTGTAACATACAATATTC
ATTTTGAGAACATTTTCGTGCTTGTTTTTGCAATAGATACTAGGCTATGCAACAGGTAAA
CAATGTATTGAATGTGAAACAAATTATATTACGTAATGCAATATGTAATCAGCGCCCATT
TTGAAACAAAATAGCTACGTAGTCCGCATTAAATCCAAATAGCGCAAACCAGACGCTGTT
TTTAGGATACATTCAATCATGCACATAATGAAATCGATAAATTCAACCGCTCACACGTAT
ACACAAAAAAAAAATGGTTACACACATGATGAAAGTAATATTAAATGTAATGTAAATAAC
AGTAGAACCATCATTAAACAAGAATGATAAAAAGTATATTAGCGAAAATGACGATGAAGT
AAGAGGCGCGACGACGCAACGGCAGGGGTGTAGTTCAGTCTCGTGGCCGCGCGCCGCCTG
CGCCTTACCCTCAACTTAAACTACTTCACAACGATACAATTAATTCAACTAAAACTATGT
TTCTGCATCCTAACATTGCAAATCAATCAATCCCTCTCCTGTAATGGGAATTATAACCGC
ATGTCTATACAATGAACATAACTGTCGCGGTGAAAGTAACCGTTATATTATAATAATCAT
TTCCTTCCGGTGAACATTACAATTATTGTAACGTGGTTGTTGTTGTTGGTGAGTCGGGTC
AACATATGCTAAGGACCTTCAGTATATCGACTAGATACTGAACACCACGCGGACCAATTA
ATACGATGTAATCATTAAATCTTTGTTTTACTCCAGTAAAAACGAAAAATATTCAACAAC
AGCTAGTAAAGCACACCGACAAATAAATCGTCAATATATCTAAGTGTACATAAGTGGTGA
TACAATTTTGCACTTTCCGCAGAACGCAAGCAAAAATTCTTTAATTATTGCAAACACGCA
TTGTTGCAATTATGTGACTCAGATTAATCGGACCTAGAGGAAAAATTTAAAGAGATATTT
AAATGAATCTAGATTCCACACCGTTTTGTCCATGACAAGTGGCAATAATCTGAAATATCT
GGACGACGTACCTACACGTCAGTAAGCACTTCATTCTGCGGAAAGCGAGGTTTTTACGTT
TTAATTTCTTACTAAATAATGTCATATTCAGTGCGTCAATTTTATTGCGTGCATGTTTGC
ACAGGCAAAGGTTCAATCAATGAACATTCTTCTGCGAAGGGATGTCGCTACATTTGGAAT
GTTTTCGCTGGTAATATATGCAGGATCCCAGTTAAATAGATTTGAAAAAATATTTAGAAA
AGCGCAGTTGGATAAACATCGAAAACTTTAGCCTGTAAAAACACCAGATTTCTTCCCTGA
TAACCCGACGCACGCTTTGCAATATAAATTAGTGTTTTGCTATTTGTATAAATATTGTCA
AGGGTATTTTCCAAACATACACTAAAAGTGTACGTCAAGTAGGTTTATAAATTAGAATAG
GAATTTCACATCAGTCTTGGGACTTCATTGTAGCAATTGAATAAGACTATACTAGATTTT
TGTAAGTACAAAATGTACAATACAGTCTGTTCGGAGTAATTGTCTTACCGTGTCCTACCT
AGCATTGAGAGGCATTTGTAGATTGTTCTAACTGATATGTTACAATTTTAATATAATAAG
TAACTGTCGCATTTCTATATTTATTTTGTTACAATTTAAACGACAATACCACGTTAGAAT
TGTGGCGAAAAAAAAAAAAGAATTGTTTTATTTTTGTTATGAAAACAGTGAAGTAGCCGT
CAGTCAAATTTGAAACAAAAGTATCAATTATATCTCTAGATTATTGTTAAGCATCATTAA
CAGAAAATTAATAAGAAATACACGTCTTTTGTTATTGTTAAAGTACATAGTCATACAATT
AGTTGGAAATTTAATCTTCCATACGTTCACAATTTATCTGGACGACCACTTTACGGGGGA
TTCATTGCGTATTTTCAATGTATGGATAGTTTAGGAGTCAGTGACACACGCTACATTCGT
TCTACGATTGAAATTAACAAACAATAAGAAGGCTAACTGGCAAACAAAATATTGAAATCA
GCGAGTCAATCAGCGCGCCCTAAAAATATCATAGTTACACATTCCACGCACCACGCAATG
AGATCAAATACAAAAAGTTTTCATTTCATCGTCGTGGTAGTGCCCAATACGGACTTACTT
AAGATATTTATTTATATGTAGGAAATACAATAGACATTCGAACAAGTGAACAAATGATAA
CGATTGTTGACAAAATCTTTTTAAGACTCTTTTGTAAATTATTCTTCAGAGAATCACATC
ATTACAATAGTTTGTTTGATTAAGTTGCAAAGGTTAATTGTCGAGTTTGATTATTTTTTT
TCAATAATATGTGGAAGCAAGCAACTTCGAGTTTTTTTAGGACAATAAATGTTTTAAACG
GCAAATTTAATGATTTCTTCTTTCACAGTAAACTAAACAACCTAAAACCTCCAAATACGT
TCAGAGCTTTCACGTATTCTTGTGTCCAATGAATTGAGAATTATTTTAATGCATTTGGGA
AATGCAATAGACAAAGAAGTAAAGGATTATATATCGGCAAGAGAGAGAGATAAATGCGAC
AGAGCGCGGCTCGGACTGTCCGCTTCTACTACTGCACTTACCACATACCTTTTATTCTAA
CCTAAAACTGAGAAAATGGAATAAGAATGTAGATACTCTTAGTTACATTTTTGCCAAATT
TCCATATATTATCACAATTATAATATAAATATCTAAGCTTTTCCATTAAATTTTGATATT
ATCCACTTAATCTTAAATTCTCATTAAATATCTCACTTGGCACAATTATAACGCAAAAAT
CGTACAATTGAATTAAACATCACGACAAAACCAAACAATACGACGTTGACATTCGCACCA
TTTAAACGCTAAAGTAATCCTATTTTCAAAATGTTCATTTACTGTCAATATAAGAAAACA
TTATAAAGCTAACAAAGACAAAATTACAAAGAAAACGATCAACAAATACCACTTACAAAT
TAAAATCATAAGATTACTCCTTAATTCCCAACAATTACTACCATATCAAAAATATTTACA
TCCATCAGAGAGGTGGATGAATATCATCTCCGTGTATATAGGGGCGGGCAGAGACGAACT
CGCCCGCTCCTTGTCTAGGCGAGGTGACTTTTGATCGCCCTTATCGTCTCCGTTATACGA
CCCTTCTATCTTTCACTCTTTGGAATAGTTACTAACACCCGCGACGCACGTCATCCTTCG
CATCGTGTCACACAGTGCATGCGATGCGATGCGACGCGACGTCTTATACCACTGGCATGC
AGAAATCAGTGAATCGTTTCAAGAAATGCATTCCTAAACTATACGTGCAAAGCATCCGTT
AGTCCGTTGAGCCTCCAGTTAAAGCGATGTCGTGCTATATCCGTGTTCCTTGTTGTTAAT
TATCTTCCCACACACCCTTCAAATAATATTTTATAACAGTTCTGCAGTGACTTAACAGAT
TAATCTATGAAGTGATAACAAAACATAATATGAACTTCTCGATTGTATAATAATGTGGTG
GTGCTATATAGATATATCCCTACTAACATATGTATAGTAAATAGAACATAATATTAGACT
ATTGCAATCTGTGATAACTTTATATCGTGTAGTTGTGTAACAGCATGAAAAACAATATAA
CAATTATCGTTAAAAATAGTGTATATGAATAGTATAGTTTGTAGTTTTATATATATTCAA
TTAGTAATCATCAACATAGATAATCCCCGGGTAAAATATGGATCCATCAATAAGTATTTA
ATTATAATTTACTACATTAATATATAATTACGACAACAACAACATCAAATGGAAATACAC
CAACACAACAGCCTTCCTGCGCATAATCCGAATTTTAGTACATACTCTGCGAACACCAGT
TCACAAACACAGTTGGCTTCACTCGACACTCATTAGCACTCCAACATTCCAACAATTACC
ATTGGAGTTACATTCACATACATTGTTATTATTTTGTACTATCTGTGATTATTTTTTTTT
GTATATAAAATGTATATTTAAGTAACTAAAAGCATTCTCGTCTGCGTAATGTAATAAAAG
AACGTACGTGTTAACAGTAAGTTCAGTTTTGTGCAGTTTTACTTATGATATATAATCCAT
CGGTCATTGGACATGTTGCGTACTAAACCCAAACGACTACATAGACGAGCCACCGTGAGA
CATACACAATTGTATAAGATAGAAAGCGTGTACAATAACATTACGAGCCTAACACAAAAA
CTATGTTCGAAAACGTACAGATACAGTACATGGCACGTATCCATTTTAAATTTTGATATC
AGACAGCTTATGATAATGTATTTTTAAGACATTTATTTACATAAGTATTACTTCATTATA
ATAATGTAAATTTTAATCAAAACGAATATGCTTTTCAAATTGCTAATTAATCAGAAATTA
ATTACATTATCCAAAGTCGTGCAAAATCAATTTCACATAAAGCAGTTTAAGCACACCTTA
TTATATGACAGCTCATATGTAATTCAACGATAATTTAAAAATTGTGTAATACATACACAT
TTCAAGGGCTGATTTATTCTGAATGCGTATTCAGTCAATCTGGGTAACTATCATCGTTAC
CATTTTTACTGATGTCCTTTTTGGGGTGCATTAAAGTATGCTTACTATGTCATCAGTTAC
TCAGAGTGACTGTAAGGCTGCTTAATTGGTTAATGCGAAAAAAAAGGTGTGTAATTAGGC
TGTAGGTAATGCGGAGGCTGGCCGCGGTTAGGGGGGGCGGGGGCAGGGTTTAGAGGGGTG
GGGTTTGTAAGAGCGCGCGGGGAGGGTTGGGGGGGTGGGGGTGGGGACGCGGACTTGTCT
GCCTACTGCTGCACGGGCGGGGGCTGCGCGGCGCGGCGGCGTCCCGGCGCGCTCGCCTGC
GCCACCATGGCACGGATGCGTCGCTGCGCAGACTGGACGCTATAAAAGGGGCCCACAATG
TGAACGGTGGTCTCGTGCTCTTGTCCCTGCGAGCCGGGCTGCTGCTGCTGCTCGGGTAGC
TTGATCAGCGAGCCGGTCACGCGCTGAAGCTCCCTCACGTTCTGTCCGCCTTTGCCGATG
ATCCGACCCACTTGCGACGAGGCCACGACAATTTCCACAATCAGCCGCACGTCATCCGAT
CCAGACATAAAACCTTCTTCCCGCATCTTTTCAAAGATAAGATACTGCGCCTTCCATTGC
GCCTCAGGACTACCGACAATGGTAACCTTGCGCTCTTGCTGTGGGTTCTGCGGTTCCTGT
TGCTTTTCTTGTTCCAAAGGCGCAATCTTAACAGAAGCATTGCTGAATCTAATAATGTTG
CGAATGTGCGAGCCCTTTGTACCGATAATCGCGCCCACAGCGTTGTTTGGGATGTACAGA
TAGGTTGTTTCCTGCGAGTCACCGGCACCCTGCTGTGCCCCAGGGCCGGCCAGCGGCGCA
TACATCGGCGGCTGGAACGGTGGCGGAGCTCCACAGAAACCACGTCCAGTCGACATCATA
GCCATTGGGTGCAACCCAGGGAACATAATGCTTTGCGGCGCCAGCACCTGCAAATCATTT
TCGTAGCTTTGACGCAATTTGGCTGAAATTTGCGATTCCGCCTTGGCCATGTTCTCGATG
GAGCCCTTAACGGTTATGATTCTCTCCAAATTGAAGCTATTGATATCATTTATAGAGGAG
ACAGTGATCTTTGTATCGGTCTCTTGCATAATTCTCTTGATGGTGTTGCCGCCTTTGCCG
ATGATGCGTCCAATGAGATTATTATGGGCCAAAATCTTCAGGCATATTTCGCCTTTATTA
GTATTATTGGCCTCCTGCTGCATTACTTCAAGGATTCTCTTGCAGGCATTGGTGCAATTC
TCGGGATTCCCATAGATGGTAATTGCTTTTTCCAGGGAGCCGACATTATCCTTCCTGTGT
ACGTCAACGCGAGCACGACTCTGCTGGGTGATGAGTCGAATGGTACTGCCCTGGCGACCG
ATGATAGCGCCGACCATGTCGCTCTGCACCAGCAGACGCAGTGGGAAGTCGGTGGGGCGC
GAGCCACCGCCAGCAGCGCCGCCTCCACCACGGCCGCCACCAGGGCGACCGCGACGACCT
CCACGAGCATTCTGCTCTGCTGCCTCCACTTTTATACGACAACCCTCCAATTCACATCCA
TTCAACCCGTTTATGGCTTGCTGCGCCTGCTCTGGACTCTCGAAGGTGATGAACACCGCT
TGGGTGTTGGGATCGCGGGTGTTGGCTTTGTCGCAATGCTGCACGTTGCCATACTGTGAG
AGCAGTGGCTCGATGTTATCGAAGCGGATATGCAGAGGTAGCCCACTGATGAGTACCTTT
GAGGATCTATCGTCATAGATTGGGGAAACGTCGCCTGATGCACCTTGAGACATGTCACCG
TCCATTTTGGACCGGATACTGGAAAGTTAAACGCGAGGCTGCCAGTAAACGAGGACGAGA
ATTCGGCCAAGCGGCGTTACCGGTACGGAAAAGTGAACACACGGAAAAGACCGGTGCGCG
CGTATAGCGAGTACTGAACGGAATGCGCGCCAAGAGCTAGCTAACTCGCGTCGTCGCCTG
TCGGCCAGTTGCACGCGTGCGGGACGAAGAGACGGGCGGGGTGCG
(7245 bp)

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