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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68107_c0_seq1
Scaffold_idBomo_Scaf003
NCBI non-redundant
(nr)		akirin_protein_[Bombyx_mori]
Ontology
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002376 P immune system process
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005719 C euchromatin
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007526 P larval somatic muscle development
GO:0016203 P muscle attachment
GO:0035060 C brahma complex
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050829 P defense response to Gram-negative bacterium
Transcript
Level		FPKM:186.92 TPM:326.01
ORF EntryO_BomoEE15477_complete:A_BomoEE_comp68107_c0_seq1
Sequence
(Nucleotide)
TCCTATCTTTTTTTTTTTTTGGGTGTTTAGCTAATTTAATTTCAGTTCTTAAACGCCAAT
AACCTACTAATAATGAGCTGATAATACAATTTAAAAAAATCCTATCCTATTTTCATTGAA
TAATGCTTGGTAACAAATCATCGTTTTCGTATTCAATCAAAATGTTTTTTTTTAACTAAA
CAATAATATAAAACAAATCCCAATAATGTTTGTCAATGTGTCGCGCAGAATCCGTGTGCG
GCGACATTAGCTAAAACGGTGCATTATTGAGAGCAAAAAAATAACTTAGAAAGTCTTAAA
TAAAGCTAATTAATTATTAATTTTCTAGTAAGCCGTGTATCAGTATGAATAAAACACAAA
AAATGAGTGATAAATTTCGGCCATGACCATTTTACAAATACATTAGATTACAAATTACCA
GACATCTGATACGAAGGCCATTCCGTCGAAGCTTGTCGCATTTGCAACTACTAGCAACGA
CGAAAAAAAAAACTATAACTATAATTCGACAACATTAAAATACAATAAAAAAGTAAATCA
TACCATTCAAAATAATTATGGCTAACTAATTCACAAACTCTTGAGGACAATGATTTAAAG
AGGCACTCTGCGTGAATTTATCATGTTATTATATACTAAACTACAGGTCCGTTTGTTTAG
AAAACGTAAATATAAAACGTTTGTATATATTTTTGATTCGAAAATTCAAATCCTACTTGT
CAAATTACTATGACATATACAACAATGACCATAACATTGGCCATATTGTTAACAAAAGAC
CAGTTTTTTTTTTAAACATTAATAACATCTCAGTACAATTTTCAATTCAAATGCGTGGCA
TACGTTTAAATCAATACTTTATAGCGAACGCAGTCGCCATCGTCCCAGTCTATGAACACA
ATTATCCAGCGAACCTTATCTAAAGCGTTATAAGCTAATTATGTTTATGTGGCATGAACC
ACGGAATTCAACCAGGACAAAATATTGTGTTAACAATGCACGCAAACAAACTGCTTACTC
TTAATATCATCTCTGTATTTATACAAATTTATCTTATTCTTAAGAATAATTTAACTTGCA
ACATTGCAGAGAATGCATTAAACTTCTTTTTACACTTTTAGTGGTACAGACTTTGAATAA
AATGTACATTTCAACAGTTAATGTGTATAATAAAATTTTATACACTAAGTAAAGTTTGTA
ACATGACAAATTTCTGTCAATATGTTGAAAATTCTGTAGTTGGTCATTTGTATTACATTT
TTTTACTAGTGCATCAAACAATACAAGTCCCAGTCGAACTCCGCCGCAATCACAATGTCT
TCATTTGTTAAGATACTTATTCTCCCGCATACATTATTCACATATACGAAAATATGTTTG
TCTTGATATATTGGCGGCGTCACACCACGTTTCCGCCTCATGTTGTTATTAGGACAGATA
GCTGGGTACGAGGTCCTGGTGCATGTGTTCGGCGTCCATACCGAGCGACATGCACGTGCT
GGGCGGGGGTCGGCGCTGCACCTGATCCAGGTTGAACCTCACAAAGGCTTCATACTGTTC
AGCAAGCTTGGTGCTGAGTACAGACTCATACTCAGCACGTAGAGCCACCTCCTGATCATG
GAGCATTCGCTCACAGATCATACGAACCTGTTTAAAAGTGAATAGTGCACGAGTGCGGGC
ACGTTGTGGGCCATGAGCTGATTGATGAGGCGGTGAACAGTCTCCTTCGGATCCACTTGA
TGATGAGCATGATGCAGCAGAGCCGTTGGCCAGGCGCAGCTGTCCACGTCTATGCAGTCG
TTTAATCTCATCATAAATCTCTTGTGCCATGCGTTCTGGGGTAATTTTCACAGGTGCACT
AACGGATTCTCCAAATGAAGATGGTTTCGATTCTGATGTTTTTAACCCAGGACTTGTGCT
TGGACTTGCTGCAAATGGTGAACATCTTCTTCTCTTTGTAGGTAATTGCGCCTTAGACTC
CCAATCCAGATTTCTTTTTAATGTAGCACACGCCATTTTCTTTTTACGCCCAACGAAATC
CTCTGGTTTACGTATATGTCAACGAATTTGTTTTAATTACGAATATAAGAAAATGAAAAA
TAATATTAAGCCCCATACAGGTAATACACGAAAAAAATATACAATTCGTTTTCAAGTTAC
AGTAAAGTCCGATGTTTTAAATTTAAAAAGATTATTTTGCACCTTCGTTTACCCGGCTGC
AGCAACTTCACTCAATTGAATTTATTTTGATCTTTTGTTATTTTGTTGTCGAAATGTCGT
GTCAAAATGAAAGACGTACCAACTGCAGCAACAGAACCACAGATAAAAAATAACAATTTA
AGAAAGTCTCAGTATTTCCAAACGACTTAACTATCGAATACCACAATCTGTTTTCGTAAA
TCGTTCCCGACTGAGCCTATTCCTATAAAAACCAAGGCGAAAGTTTCTGTGGCTTTTTCT
AGCCTTACAGTTTCTGGTAAGGCGTAAGTTCGTTTCCCATCCTAGCTATTTAAATGATTG
GCTAGTTGTATCCGTATAATATATATTTAAATGTAATTCCATAATTTATAATTAATTAAT
TTTAAACGTAGTCAATTCACGTTTCCGGAATACAACGTGGCAAGAGGCTATCTACGAATG
AAACATGTATACCTAATAAATGTATAAAATAATAACTAAATACATTTTGTAAATTTTGGA
TTTTAAACATAAATTTTTTTAAACTTTAAATTTTAAGCTTCTTGCGTATGTATAGTCGCC
CGATATAGACCGAGTTCTTATGCTGGATGACGGTTTAAAACTTATATCCTTCGGGAATAG
TACATATGTAACCTTTTCTGTATGAAAGGTATCCAGTGTCTTTCGGTGTGCCCCTGACAA
AGTATATGAGAAATTTTATGATAATCGATTAAGTAGTTAAGACATGAAATCGTAACGAAA
TATGAAACTCGCTTTCATCTACATCATAGTATGGGTGAGTTTGTGCCTAATAAAAATAAA
GATGTAAATTTGAAAAACAAAAATGTGAAGTTCACGTACTTACATTACGTTCTCACGTTA
CGATCACCTTTTTACAATTTAACTCTTAAAAAATTAATACAAATAGTCCCGTTGGCTCTG
AAAAAAGTGTATGCTCACAGATGTGAGTTAAAATTTATTTTTATTGAGTAGTCCCTTTTC
GATCGCTGTTTGTGAGCATAGATTATATACTTAATATTTGTTCGTGAGGGATGTAAATAT
AAATATTTCAACATTAATTCACAATTAACATTAGTATTATAGCCGCCTACCTTGTCTACA
TTGGTTCTGTGATCACGGATAAGGGGAGCTGTGAGCCTGAAATACGCCAACATTGGAATG
GCTAAAACAGCTATGACGCAGTTGAGCAAAGTTTGGAAAGATCGTAATATTTCGAATAGG
ACCAAAATACATCTTGTGCACTCACTGGTCTTTCCAATCGCTCTCTATGGAGCAGAAACA
TGGACCATAAAAGCAGCTGACCGAAACAGACTTGATGCTTTTGAAATGTGGTGCTGGCGC
CGCCTATTAAGGATTCCATGGACAGCCCACCGCACGAACATCTCGGTCCTACATCAGCTT
AAAATGGAGAACGCTCAACGCCTGTCTGCCACCTGTCTGCAACGCATAATGCGCTACTTT
GGCCACGTTGCCCGCAGAGGTGTAGACAACTTGGAACGTCTGATGGTCACGGGAAAAGTA
GAAGAAAATCGTCGTAGAGGCCGGAGTCCCAAACTTTAGTCCGACCAGATCTCCGAGCAA
ACCAGCGGACCACTTAGCGCTGCACTACACCAGACAACTTACCGGAACCGATGGAGGCTG
GCAGTCGACAAGCTAAAACGGAGTCATGATCCTCAGCAATGAGGGAGCGATGGAGAAGAA
GAAGCAGCCTCCATAATGATTTTGCCCTAAATTATCTTATCTCAATATAACATAGACATG
CCTAAGAACGAAACGAAATGAAATTTTAACAGAAAAGCCTAGCAAAAACTAAACACGCTC
ACTTTCACTCTATGTGGGGATTCCCCGTATCTACTATATCATTACTGTCTCCTGTTTTAC
ATCTATTTCATTCAGTATTTGGATTCATTCTATTTGGAGTTTTGATTGTGATAAGTTAAA
TTCAAATATACCTTATATTTGATTTATATAAAATCTATACTCGCACAAGTACAAGACGCG
TTGAAAGCATTTGAAGGCCAAAATAATCAAAGAATTGCAGCAACGATTTCCAGATAACTT
GAAAACGTTTCAAAATATGAATATAATGAGCATTGACTATGTTTTGAAATCAGAATAGGG
CCTAGAAATAATAACATTCGCAGGACACTTCGGCTTAAACGCTGATACAATCGATAAAGT
AGTTGTTCAATGGAGAAACCTCCCGATCCTGCGGAAAGAATGGAAAGCAGTCGACGTCGC
(4440 bp)

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