SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68095_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_probable_dimethyladenosine_transferase_[Amyelois_transitella]
Ontology
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005759 C mitochondrial matrix
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0052909 F 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity
Transcript
Level		FPKM:0.02 TPM:0.04
ORF EntryO_BomoEE15460_complete:A_BomoEE_comp68095_c0_seq2
Sequence
(Nucleotide)
ACAGGTTTCAACAGATGAGTTATTGTTTGAATGGAATTTAATTAATGAAATTTTAATTAT
TTACGGAAATACAATTGCAAATTTTATTACAAAATACAAAATACAAAAATAGTTTATTTT
CAAAAGTTTGAATGTTTTTTAGGCCAGGTATCTGGAATAAATTGTTCTATGAAATGTCCG
AGTCAAGAGAGCGCGTGACTGTTGTGGGATTGCCGAAGGCCCAAGATGCCAATTAAATGG
CAGGCACCAGGAAAACGGGACGACTCGTCGGCGGCTGCGGTCATCGCTGTCATCGCCGGA
CGTTTTGCAGAAGAGCAACCCAGTCAACGGTGTATCGTGTACCACGTATAGGTACCACGG
TAGGCTCGTTCTGACCCAAATGGGTATCCCGGAATAACAGCGGCACGTCACAGGCTACCG
TATCTTAGTGTAGTATCTGACTGTAGTCGTTAATCGTCGATGATAGTCTCTACGACCCGT
CAGTCGAGCTTCCTTGGGTTGGTGCCGTGAGTTTCGATGTAATGTTGACCACGCGAACCC
CCCTACTCTACCTGGGTGAAGATTGGAGGTCTATTGAGAGTACAAGAGGAGTCGTTTGGC
TAGGGCTGTAAATATATCCTCGCACCCGCGGTCTACTCAAGATTTGCCAACCGTCAAGTC
CCACACGACAAATAATTTTTTGAAGTATTATTTTAAATTTTATTTAATTATTCATTTAAA
AAGTGGTCTACATTTCAATTGCCAAGCATAATAAAATTTAAGCTGGAAGGCATTACTGCT
TCGCCATAGTTGCGAAGTGTGACACACCCGTTCGGGCCTTCAAATGCCTTACCACTAATT
AAAACTCTTTTTTTAGAGATGATTCCCATTAAGCGATATTAATCTTTCATCGTGGAAACT
ATAAACATGTACATAACATGTAAACATATGTTGTTTAATATATTTTTCATATTCAATTCA
AGTACTCCGGGTGGCATGTGGGCCATGTTTCTTTTGCCCACCCAACTCCAAGTGACAAAT
CAAACAAATAACAACATATAACTTTTAAACCTACCCACATAACCTCAACTCGTGTGATTT
TCTTCTTTTTAATTTGATAGTATTATACTTATACCATTAACCATTACGTTGTAAATCCAT
TTATTACTTTGTCAAACTATCGTGTGTCATTAAAAATGCCAAAAATTAAGGCAGAAAAAA
AAACGAGAATTCATAAAGAAATTGCTAAACAAGGTATTCAATTTAACAAGGACTTCGGTC
AACACATATTGAAGAATCCACTAATAATAACCTCTATGTTAGACAAATCTGGATTAAGGC
CTACTGATGTAGCACTTGAGATTGGTCCTGGTACTGGCAATATGACAGTCAAATTGCTGG
ACAGAGTAAAAAAGATTGGTTGCTGAACTTCAAAAACGTGTGCAAGGTACTCCTTATCAA
GCAAAATTACAAATTTTGGTTGGAGATGTTTTGAAAACAGAATTACCATTTTTTGATATA
TGTGTAGCAAATATTCCATATCAAATTAGTTCACCTTTAGTGTTCAAATTGCTGCTACAC
AGACCTTTCTTTAGGTGTGCAGTGCTCATGTTTCAAAAGGAGTTTGCACAGAGATTAGTT
GCAAAGCCTGGTGATAAATTGTACTGCAGACTGTCAATAAATACACAATTATTGGCTAGA
GTTGATATGCTGATGAAGGTTGGCAAGAACAATTTCAGACCACCACCCAAAGTAGAGTCT
AGTGTTGTGAGAATAGAACCAAGAAATCCACCTCCGCCTATAAATTTTGTAGAATGGGAT
GGTTTGACTAGAATAGCATTTGTAAGAAAAAATAAAACACTCTCAGCTGCATTCAAACAT
GCAACCACAATGGCTGCTTTGGAGAAAAATTACAGGGTCCATTGTTCTTTACACAATAAG
GAAATCCCTGAAGATTTTGATATTAAGCAAAAAGTACATGAAATATTGACATCCTGTGAA
GCTGATCAAATGAGGGCTAGAACAATGGATATTGATGACTTTATGAAGCTATTACATGCT
TTTAATGCTGAAGGGATTCATTTTGCATAAATATTAAAAAGAAATGTTTTCGTAACAGCT
ATTTATTTAAATAAACAAAACGCATTATACTACAACTTTCATGAAGATAAATTGTTATTG
ATGTTAAATATGTTTAATTTTCTCGAAAACTACACTGTTTGTCAATTAAATTGTTTTTAA
ATAACAGAGCTCTTGAATTTCCTTTCAGCGTAATCAGAATCGGTTTTCTCAGATTTGAAT
GGGAATCCAGGTTGTCCAGGAAGAACCATTGGTTTGGTTTTTAGTACTTTCCAACCACCC
TTCTTTGTCCAGTCGTTTCCTAAATATTTAAAGTAGTAATGTGTTGATAGCATAGCCACA
GCGATTAAACCAAGTTTTCCAGATATATATCTATAATGTGCAGCACGTTGTTCTCCCTAA
AATGAAAATATTTGAAAACTTTTGTTTACATCAACACCTGACAGGTTAGGTTATATAACG
TTA
(2523 bp)

- SilkBase 1999-2023 -